RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
CPSF7-206ENST00000448745 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
CPSF7-206ENST00000448745 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
CPSF7-206ENST00000448745 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPSF7-206ENST00000448745 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
CPSF7-206ENST00000448745 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
CPSF7-206ENST00000448745 SUPT6HQ7KZ85 1726 aaKnown RBP11.92□□□□□ -0.5
CPSF7-206ENST00000448745 NEFLP07196 543 aa11.91□□□□□ -0.5
CPSF7-206ENST00000448745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
CPSF7-206ENST00000448745 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
CPSF7-206ENST00000448745 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
CPSF7-206ENST00000448745 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
CPSF7-206ENST00000448745 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
CPSF7-206ENST00000448745 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
CPSF7-206ENST00000448745 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
CPSF7-206ENST00000448745 CDC42BPAQ5VT25 1732 aa11.88□□□□□ -0.51
CPSF7-206ENST00000448745 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
CPSF7-206ENST00000448745 GLI2P10070 1586 aa11.87□□□□□ -0.51
CPSF7-206ENST00000448745 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
CPSF7-206ENST00000448745 FKBP8Q14318 412 aa11.87□□□□□ -0.51
CPSF7-206ENST00000448745 ITGAEP38570 1179 aa11.86□□□□□ -0.51
CPSF7-206ENST00000448745 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
CPSF7-206ENST00000448745 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
CPSF7-206ENST00000448745 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-206ENST00000448745 MAP3K4Q9Y6R4 1608 aa11.85□□□□□ -0.51
CPSF7-206ENST00000448745 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
CPSF7-206ENST00000448745 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-206ENST00000448745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPSF7-206ENST00000448745 MYO5CQ9NQX4 1742 aa11.83□□□□□ -0.52
CPSF7-206ENST00000448745 ANP32CO43423 234 aa11.83□□□□□ -0.52
CPSF7-206ENST00000448745 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
CPSF7-206ENST00000448745 BCANQ96GW7 911 aa11.83□□□□□ -0.52
CPSF7-206ENST00000448745 PLCH2O75038 1416 aa11.82□□□□□ -0.52
CPSF7-206ENST00000448745 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
CPSF7-206ENST00000448745 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
CPSF7-206ENST00000448745 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
CPSF7-206ENST00000448745 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
CPSF7-206ENST00000448745 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
CPSF7-206ENST00000448745 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
CPSF7-206ENST00000448745 CD109Q6YHK3 1445 aa11.8□□□□□ -0.52
CPSF7-206ENST00000448745 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-206ENST00000448745 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
CPSF7-206ENST00000448745 ZNF644Q9H582 1327 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-206ENST00000448745 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
CPSF7-206ENST00000448745 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
CPSF7-206ENST00000448745 BCL11AQ9H165 835 aa11.77□□□□□ -0.52
CPSF7-206ENST00000448745 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.52
CPSF7-206ENST00000448745 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.52
CPSF7-206ENST00000448745 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.53
CPSF7-206ENST00000448745 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
CPSF7-206ENST00000448745 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
CPSF7-206ENST00000448745 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
CPSF7-206ENST00000448745 FANCAO15360 1455 aa11.76□□□□□ -0.53
CPSF7-206ENST00000448745 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
CPSF7-206ENST00000448745 ARHGEF12Q9NZN5 1544 aa11.75□□□□□ -0.53
CPSF7-206ENST00000448745 MBD5Q9P267 1494 aa11.74□□□□□ -0.53
CPSF7-206ENST00000448745 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
CPSF7-206ENST00000448745 EFCAB2Q5VUJ9 269 aa11.74□□□□□ -0.53
CPSF7-206ENST00000448745 ABCC1P33527 1531 aa11.74□□□□□ -0.53
CPSF7-206ENST00000448745 KIAA1107Q9UPP5 1409 aa11.73□□□□□ -0.53
CPSF7-206ENST00000448745 NEO1Q92859 1461 aa11.72□□□□□ -0.53
CPSF7-206ENST00000448745 AKNAQ7Z591 1439 aa11.72□□□□□ -0.53
CPSF7-206ENST00000448745 SYCP2Q9BX26 1530 aa11.72□□□□□ -0.53
CPSF7-206ENST00000448745 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-206ENST00000448745 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
CPSF7-206ENST00000448745 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.54
CPSF7-206ENST00000448745 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
CPSF7-206ENST00000448745 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
CPSF7-206ENST00000448745 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
CPSF7-206ENST00000448745 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
CPSF7-206ENST00000448745 ABCC5O15440 1437 aa11.7□□□□□ -0.54
CPSF7-206ENST00000448745 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPSF7-206ENST00000448745 TRIM52Q96A61 297 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-206ENST00000448745 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
CPSF7-206ENST00000448745 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
CPSF7-206ENST00000448745 DAPK1P53355 1430 aa11.68□□□□□ -0.54
CPSF7-206ENST00000448745 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
CPSF7-206ENST00000448745 GCC2Q8IWJ2 1684 aa11.67□□□□□ -0.54
CPSF7-206ENST00000448745 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
CPSF7-206ENST00000448745 RICTORQ6R327 1708 aa11.66□□□□□ -0.54
CPSF7-206ENST00000448745 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
CPSF7-206ENST00000448745 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
CPSF7-206ENST00000448745 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
CPSF7-206ENST00000448745 KDM5CP41229 1560 aa11.66□□□□□ -0.54
CPSF7-206ENST00000448745 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
CPSF7-206ENST00000448745 AFAP1Q8N556 730 aa11.65□□□□□ -0.54
CPSF7-206ENST00000448745 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
CPSF7-206ENST00000448745 MAST1Q9Y2H9 1570 aa11.64□□□□□ -0.55
CPSF7-206ENST00000448745 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
CPSF7-206ENST00000448745 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-206ENST00000448745 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
CPSF7-206ENST00000448745 RAPGEF3O95398 923 aa11.63□□□□□ -0.55
CPSF7-206ENST00000448745 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-206ENST00000448745 ADGRL2O95490 1459 aa11.62□□□□□ -0.55
CPSF7-206ENST00000448745 C9orf84Q5VXU9 1444 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms