RNA–Protein interactions for RNA: ENST00000448693.2

SPCS1-203, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-203ENST00000448693 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.23
SPCS1-203ENST00000448693 APLP2Q06481 763 aa16.45■□□□□ 0.22
SPCS1-203ENST00000448693 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
SPCS1-203ENST00000448693 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
SPCS1-203ENST00000448693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■□□□□ 11.3
SPCS1-203ENST00000448693 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
SPCS1-203ENST00000448693 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
SPCS1-203ENST00000448693 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SPCS1-203ENST00000448693 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
SPCS1-203ENST00000448693 MYO5CQ9NQX4 1742 aa16.39■□□□□ 0.21
SPCS1-203ENST00000448693 CFAP74Q9C0B2 1584 aa16.39■□□□□ 0.21
SPCS1-203ENST00000448693 KDM4FA0A1W2PPD8 638 aa16.38■□□□□ 0.21
SPCS1-203ENST00000448693 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
SPCS1-203ENST00000448693 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
SPCS1-203ENST00000448693 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
SPCS1-203ENST00000448693 NEO1Q92859 1461 aa16.35■□□□□ 0.21
SPCS1-203ENST00000448693 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
SPCS1-203ENST00000448693 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
SPCS1-203ENST00000448693 FANCAO15360 1455 aa16.3■□□□□ 0.2
SPCS1-203ENST00000448693 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
SPCS1-203ENST00000448693 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
SPCS1-203ENST00000448693 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
SPCS1-203ENST00000448693 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 CAPN15O75808 1086 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 CLIP1P30622 1438 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
SPCS1-203ENST00000448693 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
SPCS1-203ENST00000448693 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
SPCS1-203ENST00000448693 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
SPCS1-203ENST00000448693 FKBP8Q14318 412 aa16.25■□□□□ 0.19
SPCS1-203ENST00000448693 TROQ12816 1431 aaPredicted RBP16.25■□□□□ 0.19
SPCS1-203ENST00000448693 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
SPCS1-203ENST00000448693 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
SPCS1-203ENST00000448693 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
SPCS1-203ENST00000448693 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
SPCS1-203ENST00000448693 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
SPCS1-203ENST00000448693 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
SPCS1-203ENST00000448693 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
SPCS1-203ENST00000448693 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
SPCS1-203ENST00000448693 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
SPCS1-203ENST00000448693 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.18
SPCS1-203ENST00000448693 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
SPCS1-203ENST00000448693 PLCH2O75038 1416 aa16.19■□□□□ 0.18
SPCS1-203ENST00000448693 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
SPCS1-203ENST00000448693 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
SPCS1-203ENST00000448693 ABCC1P33527 1531 aa16.17■□□□□ 0.18
SPCS1-203ENST00000448693 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
SPCS1-203ENST00000448693 FER1L4A9Z1Z3 1794 aa16.15■□□□□ 0.18
SPCS1-203ENST00000448693 KDM5CP41229 1560 aa16.15■□□□□ 0.18
SPCS1-203ENST00000448693 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
SPCS1-203ENST00000448693 POLA2Q14181 598 aa16.14■□□□□ 0.17
SPCS1-203ENST00000448693 ABCA6Q8N139 1617 aa16.14■□□□□ 0.17
SPCS1-203ENST00000448693 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
SPCS1-203ENST00000448693 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
SPCS1-203ENST00000448693 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
SPCS1-203ENST00000448693 PTPRMP28827 1452 aa16.1■□□□□ 0.17
SPCS1-203ENST00000448693 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
SPCS1-203ENST00000448693 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SPCS1-203ENST00000448693 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SPCS1-203ENST00000448693 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
SPCS1-203ENST00000448693 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SPCS1-203ENST00000448693 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.16
SPCS1-203ENST00000448693 EHBP1L1Q8N3D4 1523 aa16.08■□□□□ 0.16
SPCS1-203ENST00000448693 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.16
SPCS1-203ENST00000448693 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
SPCS1-203ENST00000448693 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
SPCS1-203ENST00000448693 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
SPCS1-203ENST00000448693 ABCB7O75027 752 aa16.04■□□□□ 0.16
SPCS1-203ENST00000448693 EFCAB2Q5VUJ9 269 aa16.04■□□□□ 0.16
SPCS1-203ENST00000448693 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
SPCS1-203ENST00000448693 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
SPCS1-203ENST00000448693 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.16
SPCS1-203ENST00000448693 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
SPCS1-203ENST00000448693 ATP10AO60312 1499 aa16.01■□□□□ 0.15
SPCS1-203ENST00000448693 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
SPCS1-203ENST00000448693 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
SPCS1-203ENST00000448693 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
SPCS1-203ENST00000448693 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
SPCS1-203ENST00000448693 C3P01024 1663 aa15.96■□□□□ 0.15
SPCS1-203ENST00000448693 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
SPCS1-203ENST00000448693 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
SPCS1-203ENST00000448693 ATP7AQ04656 1500 aa15.96■□□□□ 0.15
SPCS1-203ENST00000448693 MLECQ14165 292 aa15.96■□□□□ 0.15
SPCS1-203ENST00000448693 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
SPCS1-203ENST00000448693 DSG3P32926 999 aa15.94■□□□□ 0.14
SPCS1-203ENST00000448693 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
SPCS1-203ENST00000448693 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
SPCS1-203ENST00000448693 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
SPCS1-203ENST00000448693 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
SPCS1-203ENST00000448693 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
SPCS1-203ENST00000448693 AGLP35573 1532 aa15.91■□□□□ 0.14
SPCS1-203ENST00000448693 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
SPCS1-203ENST00000448693 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
SPCS1-203ENST00000448693 PLEKHH2Q8IVE3 1493 aa15.9■□□□□ 0.14
SPCS1-203ENST00000448693 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
SPCS1-203ENST00000448693 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
SPCS1-203ENST00000448693 MROH2AA6NES4 1674 aa15.87■□□□□ 0.13
SPCS1-203ENST00000448693 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms