RNA–Protein interactions for RNA: ENST00000448656.5

CCDC148-205, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-205ENST00000448656 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.41
CCDC148-205ENST00000448656 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
CCDC148-205ENST00000448656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC148-205ENST00000448656 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
CCDC148-205ENST00000448656 WDR7Q9Y4E6 1490 aa17.57■□□□□ 0.4
CCDC148-205ENST00000448656 DAPK1P53355 1430 aa17.55■□□□□ 0.4
CCDC148-205ENST00000448656 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
CCDC148-205ENST00000448656 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
CCDC148-205ENST00000448656 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
CCDC148-205ENST00000448656 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
CCDC148-205ENST00000448656 ASXL2Q76L83 1435 aa17.54■□□□□ 0.4
CCDC148-205ENST00000448656 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
CCDC148-205ENST00000448656 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
CCDC148-205ENST00000448656 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
CCDC148-205ENST00000448656 ABCC5O15440 1437 aa17.53■□□□□ 0.4
CCDC148-205ENST00000448656 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
CCDC148-205ENST00000448656 DNMT1P26358 1616 aaKnown RBP17.52■□□□□ 0.4
CCDC148-205ENST00000448656 MYO5CQ9NQX4 1742 aa17.5■□□□□ 0.39
CCDC148-205ENST00000448656 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
CCDC148-205ENST00000448656 CDC42BPBQ9Y5S2 1711 aa17.49■□□□□ 0.39
CCDC148-205ENST00000448656 PLCH2O75038 1416 aa17.49■□□□□ 0.39
CCDC148-205ENST00000448656 NAIPQ13075 1403 aa17.49■□□□□ 0.39
CCDC148-205ENST00000448656 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC148-205ENST00000448656 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
CCDC148-205ENST00000448656 TSPY4P0CV99 314 aa17.48■□□□□ 0.39
CCDC148-205ENST00000448656 TSPY10P0CW01 314 aa17.48■□□□□ 0.39
CCDC148-205ENST00000448656 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
CCDC148-205ENST00000448656 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CCDC148-205ENST00000448656 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
CCDC148-205ENST00000448656 SAMD9LQ8IVG5 1584 aa17.45■□□□□ 0.38
CCDC148-205ENST00000448656 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
CCDC148-205ENST00000448656 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
CCDC148-205ENST00000448656 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
CCDC148-205ENST00000448656 ABCA9Q8IUA7 1624 aa17.42■□□□□ 0.38
CCDC148-205ENST00000448656 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
CCDC148-205ENST00000448656 MBD5Q9P267 1494 aa17.41■□□□□ 0.38
CCDC148-205ENST00000448656 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
CCDC148-205ENST00000448656 GCC2Q8IWJ2 1684 aa17.41■□□□□ 0.38
CCDC148-205ENST00000448656 C9orf84Q5VXU9 1444 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 KIAA1107Q9UPP5 1409 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 ARAP3Q8WWN8 1544 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
CCDC148-205ENST00000448656 NCOA1Q15788 1441 aa17.39■□□□□ 0.37
CCDC148-205ENST00000448656 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
CCDC148-205ENST00000448656 ADGBQ8N7X0 1667 aa17.38■□□□□ 0.37
CCDC148-205ENST00000448656 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
CCDC148-205ENST00000448656 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
CCDC148-205ENST00000448656 FANCAO15360 1455 aa17.37■□□□□ 0.37
CCDC148-205ENST00000448656 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
CCDC148-205ENST00000448656 ABCC1P33527 1531 aa17.34■□□□□ 0.37
CCDC148-205ENST00000448656 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
CCDC148-205ENST00000448656 KDM6BO15054 1643 aa17.33■□□□□ 0.36
CCDC148-205ENST00000448656 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
CCDC148-205ENST00000448656 ANKRD50Q9ULJ7 1429 aa17.31■□□□□ 0.36
CCDC148-205ENST00000448656 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
CCDC148-205ENST00000448656 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
CCDC148-205ENST00000448656 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
CCDC148-205ENST00000448656 MAST1Q9Y2H9 1570 aa17.29■□□□□ 0.36
CCDC148-205ENST00000448656 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
CCDC148-205ENST00000448656 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
CCDC148-205ENST00000448656 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
CCDC148-205ENST00000448656 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
CCDC148-205ENST00000448656 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.35
CCDC148-205ENST00000448656 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
CCDC148-205ENST00000448656 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
CCDC148-205ENST00000448656 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
CCDC148-205ENST00000448656 GLI2P10070 1586 aa17.24■□□□□ 0.35
CCDC148-205ENST00000448656 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
CCDC148-205ENST00000448656 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
CCDC148-205ENST00000448656 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
CCDC148-205ENST00000448656 NEO1Q92859 1461 aa17.21■□□□□ 0.34
CCDC148-205ENST00000448656 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
CCDC148-205ENST00000448656 DIP2BQ9P265 1576 aa17.2■□□□□ 0.34
CCDC148-205ENST00000448656 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
CCDC148-205ENST00000448656 NUP155O75694 1391 aa17.19■□□□□ 0.34
CCDC148-205ENST00000448656 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
CCDC148-205ENST00000448656 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
CCDC148-205ENST00000448656 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
CCDC148-205ENST00000448656 ERBINQ96RT1 1412 aa17.16■□□□□ 0.34
CCDC148-205ENST00000448656 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
CCDC148-205ENST00000448656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC148-205ENST00000448656 DENND4BO75064 1496 aaPredicted RBP17.15■□□□□ 0.34
CCDC148-205ENST00000448656 PZPP20742 1482 aa17.15■□□□□ 0.34
CCDC148-205ENST00000448656 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
CCDC148-205ENST00000448656 INO80Q9ULG1 1556 aaPredicted RBP17.14■□□□□ 0.33
CCDC148-205ENST00000448656 PKD2Q13563 968 aa17.13■□□□□ 0.33
CCDC148-205ENST00000448656 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
CCDC148-205ENST00000448656 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
CCDC148-205ENST00000448656 TEX14Q8IWB6 1497 aa17.11■□□□□ 0.33
CCDC148-205ENST00000448656 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
CCDC148-205ENST00000448656 TSPOAP1O95153 1857 aa17.09■□□□□ 0.33
CCDC148-205ENST00000448656 KDM5CP41229 1560 aa17.09■□□□□ 0.33
CCDC148-205ENST00000448656 DHX29Q7Z478 1369 aaKnown RBP17.08■□□□□ 0.33
CCDC148-205ENST00000448656 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.33
CCDC148-205ENST00000448656 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.32
CCDC148-205ENST00000448656 UNC13BO14795 1591 aa17.07■□□□□ 0.32
CCDC148-205ENST00000448656 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms