RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NAIPQ13075 1403 aa12.41□□□□□ -0.42
SYNPO2-204ENST00000448416 PTPRKQ15262 1439 aa12.4□□□□□ -0.42
SYNPO2-204ENST00000448416 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
SYNPO2-204ENST00000448416 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
SYNPO2-204ENST00000448416 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
SYNPO2-204ENST00000448416 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
SYNPO2-204ENST00000448416 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
SYNPO2-204ENST00000448416 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
SYNPO2-204ENST00000448416 UNC13AQ9UPW8 1703 aa12.38□□□□□ -0.43
SYNPO2-204ENST00000448416 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
SYNPO2-204ENST00000448416 ATAD2BQ9ULI0 1458 aa12.37□□□□□ -0.43
SYNPO2-204ENST00000448416 CUX1P39880 1505 aa12.37□□□□□ -0.43
SYNPO2-204ENST00000448416 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
SYNPO2-204ENST00000448416 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
SYNPO2-204ENST00000448416 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
SYNPO2-204ENST00000448416 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
SYNPO2-204ENST00000448416 IGF1RP08069 1367 aa12.34□□□□□ -0.43
SYNPO2-204ENST00000448416 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
SYNPO2-204ENST00000448416 RRP9O43818 475 aaKnown RBP12.33□□□□□ -0.44
SYNPO2-204ENST00000448416 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
SYNPO2-204ENST00000448416 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
SYNPO2-204ENST00000448416 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
SYNPO2-204ENST00000448416 CHIC2Q9UKJ5 165 aa12.32□□□□□ -0.44
SYNPO2-204ENST00000448416 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
SYNPO2-204ENST00000448416 PLIN1O60240 522 aa12.32□□□□□ -0.44
SYNPO2-204ENST00000448416 FOXD1Q16676 465 aa12.32□□□□□ -0.44
SYNPO2-204ENST00000448416 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 POGKQ9P215 609 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 SPATA31E1Q6ZUB1 1445 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 CRBNQ96SW2 442 aa12.31□□□□□ -0.44
SYNPO2-204ENST00000448416 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
SYNPO2-204ENST00000448416 CASKIN1Q8WXD9 1431 aa12.29□□□□□ -0.44
SYNPO2-204ENST00000448416 PDE3BQ13370 1112 aa12.28□□□□□ -0.44
SYNPO2-204ENST00000448416 DENND4BO75064 1496 aaPredicted RBP12.28□□□□□ -0.44
SYNPO2-204ENST00000448416 ARXQ96QS3 562 aa12.28□□□□□ -0.44
SYNPO2-204ENST00000448416 LRPPRCP42704 1394 aaKnown RBP12.27□□□□□ -0.44
SYNPO2-204ENST00000448416 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
SYNPO2-204ENST00000448416 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
SYNPO2-204ENST00000448416 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 CLCN1P35523 988 aa12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
SYNPO2-204ENST00000448416 BRD4O60885 1362 aaPredicted RBP12.24□□□□□ -0.45
SYNPO2-204ENST00000448416 CENPQQ7L2Z9 268 aaPredicted RBP12.24□□□□□ -0.45
SYNPO2-204ENST00000448416 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
SYNPO2-204ENST00000448416 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SYNPO2-204ENST00000448416 RGS3P49796 1198 aa12.23□□□□□ -0.45
SYNPO2-204ENST00000448416 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
SYNPO2-204ENST00000448416 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
SYNPO2-204ENST00000448416 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
SYNPO2-204ENST00000448416 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
SYNPO2-204ENST00000448416 USP47Q96K76 1375 aa12.21□□□□□ -0.45
SYNPO2-204ENST00000448416 SLKQ9H2G2 1235 aaPredicted RBP12.21□□□□□ -0.45
SYNPO2-204ENST00000448416 ARID4BQ4LE39 1312 aaPredicted RBP12.21□□□□□ -0.46
SYNPO2-204ENST00000448416 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.46
SYNPO2-204ENST00000448416 RALBP1Q15311 655 aa12.21□□□□□ -0.46
SYNPO2-204ENST00000448416 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 ANKRD30BQ9BXX2 1392 aa12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 BECN1Q14457 450 aa12.2□□□□□ -0.46
SYNPO2-204ENST00000448416 BICRAQ9NZM4 1560 aa12.19□□□□□ -0.46
SYNPO2-204ENST00000448416 KDM6BO15054 1643 aa12.18□□□□□ -0.46
SYNPO2-204ENST00000448416 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
SYNPO2-204ENST00000448416 GCC2Q8IWJ2 1684 aa12.18□□□□□ -0.46
SYNPO2-204ENST00000448416 PANK2Q9BZ23 570 aa12.17□□□□□ -0.46
SYNPO2-204ENST00000448416 EFCAB5A4FU69 1503 aa12.17□□□□□ -0.46
SYNPO2-204ENST00000448416 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
SYNPO2-204ENST00000448416 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
SYNPO2-204ENST00000448416 CFTRP13569 1480 aa12.16□□□□□ -0.46
SYNPO2-204ENST00000448416 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
SYNPO2-204ENST00000448416 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
SYNPO2-204ENST00000448416 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
SYNPO2-204ENST00000448416 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
SYNPO2-204ENST00000448416 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
SYNPO2-204ENST00000448416 ESPNB1AK53 854 aa12.12□□□□□ -0.47
SYNPO2-204ENST00000448416 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
SYNPO2-204ENST00000448416 USP19O94966 1318 aa12.11□□□□□ -0.47
SYNPO2-204ENST00000448416 TPM2P07951 284 aa12.11□□□□□ -0.47
SYNPO2-204ENST00000448416 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
SYNPO2-204ENST00000448416 MRE11P49959 708 aa12.1□□□□□ -0.47
SYNPO2-204ENST00000448416 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
SYNPO2-204ENST00000448416 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
SYNPO2-204ENST00000448416 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
SYNPO2-204ENST00000448416 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
SYNPO2-204ENST00000448416 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
SYNPO2-204ENST00000448416 SEC24BO95487 1268 aa12.08□□□□□ -0.48
SYNPO2-204ENST00000448416 MCM4P33991 863 aa12.08□□□□□ -0.48
SYNPO2-204ENST00000448416 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
SYNPO2-204ENST00000448416 KDM5CP41229 1560 aa12.08□□□□□ -0.48
SYNPO2-204ENST00000448416 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
SYNPO2-204ENST00000448416 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
SYNPO2-204ENST00000448416 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms