RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 SPRYD3Q8NCJ5 442 aa25.73■■□□□ 1.71
FGFR1-214ENST00000447712 G3V3G9 751 aa25.73■■□□□ 1.71
FGFR1-214ENST00000447712 DCAF8Q5TAQ9 597 aa25.73■■□□□ 1.71
FGFR1-214ENST00000447712 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
FGFR1-214ENST00000447712 FOXD1Q16676 465 aa25.72■■□□□ 1.71
FGFR1-214ENST00000447712 CUX2O14529 1486 aa25.71■■□□□ 1.71
FGFR1-214ENST00000447712 PKD2Q13563 968 aa25.71■■□□□ 1.71
FGFR1-214ENST00000447712 NRDCO43847 1150 aa25.68■■□□□ 1.7
FGFR1-214ENST00000447712 U2AF1L5P0DN76 240 aaPredicted RBP25.68■■□□□ 1.7
FGFR1-214ENST00000447712 U2AF1Q01081 240 aaKnown RBP eCLIP25.68■■□□□ 1.7
FGFR1-214ENST00000447712 HSCBQ8IWL3 235 aa25.68■■□□□ 1.7
FGFR1-214ENST00000447712 EID1Q9Y6B2 187 aa25.67■■□□□ 1.7
FGFR1-214ENST00000447712 AMER1Q5JTC6 1135 aaPredicted RBP25.67■■□□□ 1.7
FGFR1-214ENST00000447712 GORABQ5T7V8 394 aa25.67■■□□□ 1.7
FGFR1-214ENST00000447712 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
FGFR1-214ENST00000447712 TAF7LQ5H9L4 462 aa25.66■■□□□ 1.7
FGFR1-214ENST00000447712 NUTM2FA1L443 756 aa25.66■■□□□ 1.7
FGFR1-214ENST00000447712 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
FGFR1-214ENST00000447712 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
FGFR1-214ENST00000447712 PPP4R2Q9NY27 417 aa25.65■■□□□ 1.7
FGFR1-214ENST00000447712 KIAA1211Q6ZU35 1233 aa25.65■■□□□ 1.7
FGFR1-214ENST00000447712 B4GALNT3Q6L9W6 998 aa25.63■■□□□ 1.69
FGFR1-214ENST00000447712 NGDNQ8NEJ9 315 aaKnown RBP25.63■■□□□ 1.69
FGFR1-214ENST00000447712 LTV1Q96GA3 475 aaPredicted RBP25.62■■□□□ 1.69
FGFR1-214ENST00000447712 CARMIL2Q6F5E8 1435 aa25.62■■□□□ 1.69
FGFR1-214ENST00000447712 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.61■■□□□ 1.69
FGFR1-214ENST00000447712 KIF3BO15066 747 aa25.61■■□□□ 1.69
FGFR1-214ENST00000447712 EFCAB2Q5VUJ9 269 aa25.61■■□□□ 1.69
FGFR1-214ENST00000447712 DRC7Q8IY82 874 aa25.61■■□□□ 1.69
FGFR1-214ENST00000447712 IPO8O15397 1037 aaKnown RBP25.58■■□□□ 1.69
FGFR1-214ENST00000447712 ITPRIPQ8IWB1 547 aa25.58■■□□□ 1.69
FGFR1-214ENST00000447712 NACADO15069 1562 aa25.57■■□□□ 1.68
FGFR1-214ENST00000447712 GTF2E1P29083 439 aaPredicted RBP25.57■■□□□ 1.68
FGFR1-214ENST00000447712 NAP1L5Q96NT1 182 aaPredicted RBP25.57■■□□□ 1.68
FGFR1-214ENST00000447712 SPAG9O60271 1321 aaKnown RBP25.56■■□□□ 1.68
FGFR1-214ENST00000447712 ROCK2O75116 1388 aaKnown RBP25.55■■□□□ 1.68
FGFR1-214ENST00000447712 HSPA5P11021 654 aaKnown RBP25.55■■□□□ 1.68
FGFR1-214ENST00000447712 STK31Q9BXU1 1019 aa25.55■■□□□ 1.68
FGFR1-214ENST00000447712 CALD1Q05682 793 aaKnown RBP25.54■■□□□ 1.68
FGFR1-214ENST00000447712 KTN1Q86UP2 1357 aaKnown RBP25.54■■□□□ 1.68
FGFR1-214ENST00000447712 AMPHP49418 695 aa25.52■■□□□ 1.68
FGFR1-214ENST00000447712 MSH5O43196 834 aa25.52■■□□□ 1.68
FGFR1-214ENST00000447712 WASHC2CQ9Y4E1 1318 aa25.52■■□□□ 1.68
FGFR1-214ENST00000447712 FRAT2O75474 233 aaPredicted RBP25.52■■□□□ 1.68
FGFR1-214ENST00000447712 PRM3Q9NNZ6 103 aa25.51■■□□□ 1.67
FGFR1-214ENST00000447712 NUP155O75694 1391 aa25.51■■□□□ 1.67
FGFR1-214ENST00000447712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.5■■□□□ 1.67
FGFR1-214ENST00000447712 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
FGFR1-214ENST00000447712 SLC4A10Q6U841 1118 aa25.49■■□□□ 1.67
FGFR1-214ENST00000447712 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.676e-6■□□□□ 8.8
FGFR1-214ENST00000447712 ERICH6BQ5W0A0 696 aa25.48■■□□□ 1.67
FGFR1-214ENST00000447712 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
FGFR1-214ENST00000447712 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
FGFR1-214ENST00000447712 RTN4Q9NQC3 1192 aaKnown RBP25.46■■□□□ 1.67
FGFR1-214ENST00000447712 TDRD9Q8NDG6 1382 aaKnown RBP25.46■■□□□ 1.67
FGFR1-214ENST00000447712 KIAA2012Q0VF49 1180 aa25.45■■□□□ 1.66
FGFR1-214ENST00000447712 HSP90B1P14625 803 aaKnown RBP25.45■■□□□ 1.66
FGFR1-214ENST00000447712 TERF2IPQ9NYB0 399 aa25.45■■□□□ 1.66
FGFR1-214ENST00000447712 PDE4CQ08493 712 aa25.44■■□□□ 1.66
FGFR1-214ENST00000447712 CFAP44Q96MT7 982 aa25.44■■□□□ 1.66
FGFR1-214ENST00000447712 NOP58Q9Y2X3 529 aaKnown RBP25.44■■□□□ 1.66
FGFR1-214ENST00000447712 TRIM6-TRIM34B2RNG4 842 aa25.43■■□□□ 1.66
FGFR1-214ENST00000447712 TOMM22Q9NS69 142 aa25.43■■□□□ 1.66
FGFR1-214ENST00000447712 EVA1CP58658 441 aa25.42■■□□□ 1.66
FGFR1-214ENST00000447712 GPATCH3Q96I76 525 aa25.42■■□□□ 1.66
FGFR1-214ENST00000447712 CHAF1AQ13111 956 aaPredicted RBP25.41■■□□□ 1.66
FGFR1-214ENST00000447712 VPS53Q5VIR6 699 aa25.41■■□□□ 1.66
FGFR1-214ENST00000447712 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
FGFR1-214ENST00000447712 PDS5BQ9NTI5 1447 aa25.4■■□□□ 1.66
FGFR1-214ENST00000447712 RASSF8Q8NHQ8 419 aa25.39■■□□□ 1.66
FGFR1-214ENST00000447712 EIF3AQ14152 1382 aaKnown RBP25.39■■□□□ 1.65
FGFR1-214ENST00000447712 CHMP4AQ9BY43 222 aa25.39■■□□□ 1.65
FGFR1-214ENST00000447712 SOGA1O94964 1423 aa25.38■■□□□ 1.65
FGFR1-214ENST00000447712 MEX3CQ5U5Q3 659 aaKnown RBP25.38■■□□□ 1.65
FGFR1-214ENST00000447712 MPHOSPH9Q99550 1183 aa25.38■■□□□ 1.65
FGFR1-214ENST00000447712 SMC4Q9NTJ3 1288 aa25.38■■□□□ 1.65
FGFR1-214ENST00000447712 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
FGFR1-214ENST00000447712 ANKRD30AQ9BXX3 1397 aa25.37■■□□□ 1.65
FGFR1-214ENST00000447712 CCDC146Q8IYE0 955 aa25.37■■□□□ 1.65
FGFR1-214ENST00000447712 L1TD1Q5T7N2 865 aaKnown RBP25.36■■□□□ 1.65
FGFR1-214ENST00000447712 RWDD1Q9H446 243 aaPredicted RBP25.36■■□□□ 1.65
FGFR1-214ENST00000447712 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
FGFR1-214ENST00000447712 NOC3LQ8WTT2 800 aaKnown RBP25.34■■□□□ 1.65
FGFR1-214ENST00000447712 TRAK1Q9UPV9 953 aa25.34■■□□□ 1.65
FGFR1-214ENST00000447712 CREBRFQ8IUR6 639 aa25.33■■□□□ 1.65
FGFR1-214ENST00000447712 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.64
FGFR1-214ENST00000447712 NOL8Q76FK4 1167 aaKnown RBP25.32■■□□□ 1.64
FGFR1-214ENST00000447712 MSNP26038 577 aaKnown RBP25.32■■□□□ 1.64
FGFR1-214ENST00000447712 MARCH6O60337 910 aa25.31■■□□□ 1.64
FGFR1-214ENST00000447712 ANO8Q9HCE9 1232 aaPredicted RBP25.3■■□□□ 1.64
FGFR1-214ENST00000447712 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
FGFR1-214ENST00000447712 CLUAP1Q96AJ1 413 aa25.3■■□□□ 1.64
FGFR1-214ENST00000447712 HDAC5Q9UQL6 1122 aa25.3■■□□□ 1.64
FGFR1-214ENST00000447712 HMMRO75330 724 aa25.29■■□□□ 1.64
FGFR1-214ENST00000447712 HTATSF1O43719 755 aaKnown RBP25.28■■□□□ 1.64
FGFR1-214ENST00000447712 KLHL34Q8N239 644 aa25.28■■□□□ 1.64
FGFR1-214ENST00000447712 RCAN3Q9UKA8 241 aa25.28■■□□□ 1.64
FGFR1-214ENST00000447712 MFAP1P55081 439 aaKnown RBP25.26■■□□□ 1.63
FGFR1-214ENST00000447712 NGEFQ8N5V2 710 aa25.26■■□□□ 1.63
FGFR1-214ENST00000447712 RALBP1Q15311 655 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms