RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
TTC39A-212ENST00000447632 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
TTC39A-212ENST00000447632 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
TTC39A-212ENST00000447632 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
TTC39A-212ENST00000447632 TSPOAP1O95153 1857 aa12.94□□□□□ -0.34
TTC39A-212ENST00000447632 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
TTC39A-212ENST00000447632 MYOM3Q5VTT5 1437 aa12.93□□□□□ -0.34
TTC39A-212ENST00000447632 FANCAO15360 1455 aa12.92□□□□□ -0.34
TTC39A-212ENST00000447632 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
TTC39A-212ENST00000447632 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
TTC39A-212ENST00000447632 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
TTC39A-212ENST00000447632 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
TTC39A-212ENST00000447632 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
TTC39A-212ENST00000447632 GLI2P10070 1586 aa12.88□□□□□ -0.35
TTC39A-212ENST00000447632 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
TTC39A-212ENST00000447632 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
TTC39A-212ENST00000447632 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
TTC39A-212ENST00000447632 COL17A1Q9UMD9 1497 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-212ENST00000447632 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
TTC39A-212ENST00000447632 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-212ENST00000447632 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
TTC39A-212ENST00000447632 TRAPPC8Q9Y2L5 1435 aa12.85□□□□□ -0.35
TTC39A-212ENST00000447632 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
TTC39A-212ENST00000447632 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
TTC39A-212ENST00000447632 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
TTC39A-212ENST00000447632 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
TTC39A-212ENST00000447632 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
TTC39A-212ENST00000447632 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
TTC39A-212ENST00000447632 MYT1Q01538 1121 aa12.83□□□□□ -0.36
TTC39A-212ENST00000447632 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
TTC39A-212ENST00000447632 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
TTC39A-212ENST00000447632 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
TTC39A-212ENST00000447632 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
TTC39A-212ENST00000447632 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
TTC39A-212ENST00000447632 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
TTC39A-212ENST00000447632 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 DENND4BO75064 1496 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-212ENST00000447632 NEO1Q92859 1461 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 PTPRKQ15262 1439 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
TTC39A-212ENST00000447632 PPRC1Q5VV67 1664 aaKnown RBP12.79□□□□□ -0.36
TTC39A-212ENST00000447632 ABCC5O15440 1437 aa12.79□□□□□ -0.36
TTC39A-212ENST00000447632 KIAA1107Q9UPP5 1409 aa12.78□□□□□ -0.36
TTC39A-212ENST00000447632 DAPK1P53355 1430 aa12.76□□□□□ -0.37
TTC39A-212ENST00000447632 ITSN2Q9NZM3 1697 aa12.76□□□□□ -0.37
TTC39A-212ENST00000447632 ARAP3Q8WWN8 1544 aa12.76□□□□□ -0.37
TTC39A-212ENST00000447632 MLECQ14165 292 aa12.76□□□□□ -0.37
TTC39A-212ENST00000447632 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
TTC39A-212ENST00000447632 ARID4BQ4LE39 1312 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-212ENST00000447632 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
TTC39A-212ENST00000447632 ABCC1P33527 1531 aa12.75□□□□□ -0.37
TTC39A-212ENST00000447632 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
TTC39A-212ENST00000447632 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
TTC39A-212ENST00000447632 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
TTC39A-212ENST00000447632 CCDC141Q6ZP82 1450 aa12.74□□□□□ -0.37
TTC39A-212ENST00000447632 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
TTC39A-212ENST00000447632 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
TTC39A-212ENST00000447632 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
TTC39A-212ENST00000447632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
TTC39A-212ENST00000447632 GGT6Q6P531 493 aa12.72□□□□□ -0.37
TTC39A-212ENST00000447632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
TTC39A-212ENST00000447632 KDM6BO15054 1643 aa12.71□□□□□ -0.37
TTC39A-212ENST00000447632 KIF3BO15066 747 aa12.71□□□□□ -0.37
TTC39A-212ENST00000447632 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
TTC39A-212ENST00000447632 ANKRD30AQ9BXX3 1397 aa12.7□□□□□ -0.38
TTC39A-212ENST00000447632 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
TTC39A-212ENST00000447632 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
TTC39A-212ENST00000447632 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
TTC39A-212ENST00000447632 TRIM52Q96A61 297 aa12.69□□□□□ -0.38
TTC39A-212ENST00000447632 CFAP74Q9C0B2 1584 aa12.68□□□□□ -0.38
TTC39A-212ENST00000447632 FRMPD1Q5SYB0 1578 aa12.66□□□□□ -0.38
TTC39A-212ENST00000447632 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
TTC39A-212ENST00000447632 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
TTC39A-212ENST00000447632 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
TTC39A-212ENST00000447632 ATP7AQ04656 1500 aa12.64□□□□□ -0.39
TTC39A-212ENST00000447632 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
TTC39A-212ENST00000447632 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
TTC39A-212ENST00000447632 RICTORQ6R327 1708 aa12.63□□□□□ -0.39
TTC39A-212ENST00000447632 NAIPQ13075 1403 aa12.63□□□□□ -0.39
TTC39A-212ENST00000447632 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
TTC39A-212ENST00000447632 ATP10AO60312 1499 aa12.63□□□□□ -0.39
TTC39A-212ENST00000447632 KDM5CP41229 1560 aa12.62□□□□□ -0.39
TTC39A-212ENST00000447632 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
TTC39A-212ENST00000447632 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
TTC39A-212ENST00000447632 RAB3GAP2Q9H2M9 1393 aa12.62□□□□□ -0.39
TTC39A-212ENST00000447632 A2MP01023 1474 aa12.61□□□□□ -0.39
TTC39A-212ENST00000447632 SETD5Q9C0A6 1442 aa12.61□□□□□ -0.39
TTC39A-212ENST00000447632 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
TTC39A-212ENST00000447632 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
TTC39A-212ENST00000447632 MAGI2Q86UL8 1455 aa12.6□□□□□ -0.39
TTC39A-212ENST00000447632 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
TTC39A-212ENST00000447632 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
TTC39A-212ENST00000447632 FOXD1Q16676 465 aa12.6□□□□□ -0.39
TTC39A-212ENST00000447632 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
TTC39A-212ENST00000447632 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
TTC39A-212ENST00000447632 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
TTC39A-212ENST00000447632 NUP155O75694 1391 aa12.59□□□□□ -0.39
TTC39A-212ENST00000447632 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms