RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
PRDM15-206ENST00000447016 HTATSF1O43719 755 aaKnown RBP16.86■□□□□ 0.29
PRDM15-206ENST00000447016 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
PRDM15-206ENST00000447016 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
PRDM15-206ENST00000447016 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
PRDM15-206ENST00000447016 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
PRDM15-206ENST00000447016 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
PRDM15-206ENST00000447016 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
PRDM15-206ENST00000447016 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
PRDM15-206ENST00000447016 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.28
PRDM15-206ENST00000447016 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
PRDM15-206ENST00000447016 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
PRDM15-206ENST00000447016 KANK1Q14678 1352 aa16.8■□□□□ 0.28
PRDM15-206ENST00000447016 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
PRDM15-206ENST00000447016 GZF1Q9H116 711 aaPredicted RBP16.79■□□□□ 0.28
PRDM15-206ENST00000447016 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
PRDM15-206ENST00000447016 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
PRDM15-206ENST00000447016 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
PRDM15-206ENST00000447016 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
PRDM15-206ENST00000447016 PLEKHG5O94827 1062 aa16.77■□□□□ 0.27
PRDM15-206ENST00000447016 CSPP1Q1MSJ5 1256 aa16.76■□□□□ 0.27
PRDM15-206ENST00000447016 TPM4P67936 248 aa16.75■□□□□ 0.27
PRDM15-206ENST00000447016 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
PRDM15-206ENST00000447016 TNNT3P45378 269 aaPredicted RBP16.74■□□□□ 0.27
PRDM15-206ENST00000447016 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
PRDM15-206ENST00000447016 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PRDM15-206ENST00000447016 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
PRDM15-206ENST00000447016 GNL2Q13823 731 aaKnown RBP16.73■□□□□ 0.27
PRDM15-206ENST00000447016 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
PRDM15-206ENST00000447016 HDGFP51858 240 aaKnown RBP16.73■□□□□ 0.27
PRDM15-206ENST00000447016 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
PRDM15-206ENST00000447016 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
PRDM15-206ENST00000447016 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
PRDM15-206ENST00000447016 PHF14O94880 888 aa16.72■□□□□ 0.27
PRDM15-206ENST00000447016 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
PRDM15-206ENST00000447016 CCDC34Q96HJ3 373 aa16.72■□□□□ 0.27
PRDM15-206ENST00000447016 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
PRDM15-206ENST00000447016 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
PRDM15-206ENST00000447016 PKD2Q13563 968 aa16.71■□□□□ 0.27
PRDM15-206ENST00000447016 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
PRDM15-206ENST00000447016 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
PRDM15-206ENST00000447016 HSP90AA2PQ14568 343 aaPredicted RBP16.7■□□□□ 0.26
PRDM15-206ENST00000447016 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
PRDM15-206ENST00000447016 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
PRDM15-206ENST00000447016 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
PRDM15-206ENST00000447016 HMMRO75330 724 aa16.69■□□□□ 0.26
PRDM15-206ENST00000447016 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-206ENST00000447016 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRDM15-206ENST00000447016 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
PRDM15-206ENST00000447016 GOLGA6L1Q8N7Z2 621 aa16.67■□□□□ 0.26
PRDM15-206ENST00000447016 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
PRDM15-206ENST00000447016 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
PRDM15-206ENST00000447016 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
PRDM15-206ENST00000447016 SOGA1O94964 1423 aa16.66■□□□□ 0.26
PRDM15-206ENST00000447016 GSE1Q14687 1217 aa16.65■□□□□ 0.26
PRDM15-206ENST00000447016 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
PRDM15-206ENST00000447016 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
PRDM15-206ENST00000447016 ST18O60284 1047 aa16.65■□□□□ 0.26
PRDM15-206ENST00000447016 NACADO15069 1562 aa16.65■□□□□ 0.26
PRDM15-206ENST00000447016 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
PRDM15-206ENST00000447016 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
PRDM15-206ENST00000447016 APBB1O00213 710 aa16.64■□□□□ 0.25
PRDM15-206ENST00000447016 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
PRDM15-206ENST00000447016 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
PRDM15-206ENST00000447016 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-206ENST00000447016 NPHP1O15259 732 aa16.63■□□□□ 0.25
PRDM15-206ENST00000447016 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
PRDM15-206ENST00000447016 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
PRDM15-206ENST00000447016 PDE4AP27815 886 aa16.61■□□□□ 0.25
PRDM15-206ENST00000447016 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
PRDM15-206ENST00000447016 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
PRDM15-206ENST00000447016 CUX2O14529 1486 aa16.61■□□□□ 0.25
PRDM15-206ENST00000447016 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
PRDM15-206ENST00000447016 ARID3AQ99856 593 aa16.6■□□□□ 0.25
PRDM15-206ENST00000447016 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
PRDM15-206ENST00000447016 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
PRDM15-206ENST00000447016 KIF15Q9NS87 1388 aa16.58■□□□□ 0.25
PRDM15-206ENST00000447016 LMOD3Q0VAK6 560 aa16.58■□□□□ 0.24
PRDM15-206ENST00000447016 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.24
PRDM15-206ENST00000447016 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
PRDM15-206ENST00000447016 NUP155O75694 1391 aa16.57■□□□□ 0.24
PRDM15-206ENST00000447016 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
PRDM15-206ENST00000447016 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
PRDM15-206ENST00000447016 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
PRDM15-206ENST00000447016 L3MBTL2Q969R5 705 aa16.56■□□□□ 0.24
PRDM15-206ENST00000447016 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
PRDM15-206ENST00000447016 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
PRDM15-206ENST00000447016 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
PRDM15-206ENST00000447016 TPM3P06753 285 aa16.54■□□□□ 0.24
PRDM15-206ENST00000447016 CGNL1Q0VF96 1302 aa16.54■□□□□ 0.24
PRDM15-206ENST00000447016 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PRDM15-206ENST00000447016 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
PRDM15-206ENST00000447016 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
PRDM15-206ENST00000447016 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.23
PRDM15-206ENST00000447016 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
PRDM15-206ENST00000447016 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
PRDM15-206ENST00000447016 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
PRDM15-206ENST00000447016 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
PRDM15-206ENST00000447016 SOX12O15370 315 aa16.51■□□□□ 0.23
PRDM15-206ENST00000447016 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms