RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.18
HDAC11-214ENST00000446613 HECW1Q76N89 1606 aa22.38■■□□□ 1.17
HDAC11-214ENST00000446613 NOP58Q9Y2X3 529 aaKnown RBP22.36■■□□□ 1.17
HDAC11-214ENST00000446613 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
HDAC11-214ENST00000446613 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
HDAC11-214ENST00000446613 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
HDAC11-214ENST00000446613 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
HDAC11-214ENST00000446613 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
HDAC11-214ENST00000446613 ANKRD30BQ9BXX2 1392 aa22.29■■□□□ 1.16
HDAC11-214ENST00000446613 TCOF1Q13428 1488 aaKnown RBP22.29■■□□□ 1.16
HDAC11-214ENST00000446613 CCDC136Q96JN2 1154 aa22.29■■□□□ 1.16
HDAC11-214ENST00000446613 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
HDAC11-214ENST00000446613 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
HDAC11-214ENST00000446613 SPATA31E1Q6ZUB1 1445 aa22.28■■□□□ 1.16
HDAC11-214ENST00000446613 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
HDAC11-214ENST00000446613 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
HDAC11-214ENST00000446613 RPRD2Q5VT52 1461 aaKnown RBP22.26■■□□□ 1.15
HDAC11-214ENST00000446613 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
HDAC11-214ENST00000446613 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
HDAC11-214ENST00000446613 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
HDAC11-214ENST00000446613 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
HDAC11-214ENST00000446613 EPRSP07814 1512 aaKnown RBP22.22■■□□□ 1.15
HDAC11-214ENST00000446613 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
HDAC11-214ENST00000446613 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
HDAC11-214ENST00000446613 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
HDAC11-214ENST00000446613 IPO9Q96P70 1041 aaKnown RBP22.16■■□□□ 1.14
HDAC11-214ENST00000446613 DAPK1P53355 1430 aa22.16■■□□□ 1.14
HDAC11-214ENST00000446613 ANP32AP39687 249 aaKnown RBP22.16■■□□□ 1.14
HDAC11-214ENST00000446613 SALL2Q9Y467 1007 aaPredicted RBP22.15■■□□□ 1.14
HDAC11-214ENST00000446613 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
HDAC11-214ENST00000446613 MIA2Q96PC5 1412 aa22.15■■□□□ 1.14
HDAC11-214ENST00000446613 ABCC5O15440 1437 aa22.14■■□□□ 1.13
HDAC11-214ENST00000446613 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.13
HDAC11-214ENST00000446613 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
HDAC11-214ENST00000446613 USP47Q96K76 1375 aa22.13■■□□□ 1.13
HDAC11-214ENST00000446613 PNISRQ8TF01 805 aaKnown RBP22.12■■□□□ 1.13
HDAC11-214ENST00000446613 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
HDAC11-214ENST00000446613 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
HDAC11-214ENST00000446613 ZBTB47Q9UFB7 747 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-214ENST00000446613 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
HDAC11-214ENST00000446613 EXOC6Q8TAG9 804 aa22.06■■□□□ 1.12
HDAC11-214ENST00000446613 PZPP20742 1482 aa22.05■■□□□ 1.12
HDAC11-214ENST00000446613 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
HDAC11-214ENST00000446613 ROCK1Q13464 1354 aa22.05■■□□□ 1.12
HDAC11-214ENST00000446613 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
HDAC11-214ENST00000446613 WDR62O43379 1518 aa22.04■■□□□ 1.12
HDAC11-214ENST00000446613 PKD2Q13563 968 aa22.04■■□□□ 1.12
HDAC11-214ENST00000446613 RTL5Q5HYW3 569 aaPredicted RBP22.03■■□□□ 1.12
HDAC11-214ENST00000446613 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
HDAC11-214ENST00000446613 SKAP1Q86WV1 359 aa22.02■■□□□ 1.12
HDAC11-214ENST00000446613 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
HDAC11-214ENST00000446613 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
HDAC11-214ENST00000446613 DNMT1P26358 1616 aaKnown RBP22.01■■□□□ 1.11
HDAC11-214ENST00000446613 MBD5Q9P267 1494 aa21.98■■□□□ 1.11
HDAC11-214ENST00000446613 CARD11Q9BXL7 1154 aa21.98■■□□□ 1.11
HDAC11-214ENST00000446613 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
HDAC11-214ENST00000446613 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
HDAC11-214ENST00000446613 IL27Q8NEV9 243 aa21.97■■□□□ 1.11
HDAC11-214ENST00000446613 KDM5CP41229 1560 aa21.95■■□□□ 1.1
HDAC11-214ENST00000446613 RTN4Q9NQC3 1192 aaKnown RBP21.95■■□□□ 1.1
HDAC11-214ENST00000446613 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
HDAC11-214ENST00000446613 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
HDAC11-214ENST00000446613 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
HDAC11-214ENST00000446613 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
HDAC11-214ENST00000446613 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
HDAC11-214ENST00000446613 CDCA7LQ96GN5 454 aa21.93■■□□□ 1.1
HDAC11-214ENST00000446613 PLIN1O60240 522 aa21.92■■□□□ 1.1
HDAC11-214ENST00000446613 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
HDAC11-214ENST00000446613 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
HDAC11-214ENST00000446613 PDE4AP27815 886 aa21.92■■□□□ 1.1
HDAC11-214ENST00000446613 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
HDAC11-214ENST00000446613 LRPPRCP42704 1394 aaKnown RBP21.91■■□□□ 1.1
HDAC11-214ENST00000446613 KIF15Q9NS87 1388 aa21.89■■□□□ 1.09
HDAC11-214ENST00000446613 KIF14Q15058 1648 aa21.88■■□□□ 1.09
HDAC11-214ENST00000446613 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
HDAC11-214ENST00000446613 NEFMP07197 916 aa21.88■■□□□ 1.09
HDAC11-214ENST00000446613 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
HDAC11-214ENST00000446613 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
HDAC11-214ENST00000446613 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
HDAC11-214ENST00000446613 BACH2Q9BYV9 841 aa21.85■■□□□ 1.09
HDAC11-214ENST00000446613 ADAMTS12P58397 1594 aa21.83■■□□□ 1.09
HDAC11-214ENST00000446613 TCERG1O14776 1098 aaKnown RBP21.83■■□□□ 1.09
HDAC11-214ENST00000446613 ARID4BQ4LE39 1312 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-214ENST00000446613 BRD4O60885 1362 aaPredicted RBP21.83■■□□□ 1.08
HDAC11-214ENST00000446613 NUP155O75694 1391 aa21.83■■□□□ 1.08
HDAC11-214ENST00000446613 DISP1Q96F81 1524 aa21.83■■□□□ 1.08
HDAC11-214ENST00000446613 ROCK2O75116 1388 aaKnown RBP21.82■■□□□ 1.08
HDAC11-214ENST00000446613 RALGAPBQ86X10 1494 aa21.8■■□□□ 1.08
HDAC11-214ENST00000446613 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
HDAC11-214ENST00000446613 RALBP1Q15311 655 aa21.79■■□□□ 1.08
HDAC11-214ENST00000446613 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
HDAC11-214ENST00000446613 CC2D1BQ5T0F9 858 aaKnown RBP21.78■■□□□ 1.08
HDAC11-214ENST00000446613 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
HDAC11-214ENST00000446613 SLC4A3P48751 1232 aa21.77■■□□□ 1.08
HDAC11-214ENST00000446613 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
HDAC11-214ENST00000446613 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
HDAC11-214ENST00000446613 CRBNQ96SW2 442 aa21.76■■□□□ 1.07
HDAC11-214ENST00000446613 RAPGEF6Q8TEU7 1601 aa21.76■■□□□ 1.07
HDAC11-214ENST00000446613 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
HDAC11-214ENST00000446613 UHRF1BP1Q6BDS2 1440 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms