RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 MYO5CQ9NQX4 1742 aa21.51■■□□□ 1.03
GARNL3-208ENST00000444677 ARHGAP5Q13017 1502 aa21.46■■□□□ 1.03
GARNL3-208ENST00000444677 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
GARNL3-208ENST00000444677 AFAP1Q8N556 730 aa21.44■■□□□ 1.02
GARNL3-208ENST00000444677 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
GARNL3-208ENST00000444677 ARHGEF40Q8TER5 1519 aa21.43■■□□□ 1.02
GARNL3-208ENST00000444677 GPATCH8Q9UKJ3 1502 aaKnown RBP21.43■■□□□ 1.02
GARNL3-208ENST00000444677 POGZQ7Z3K3 1410 aa21.41■■□□□ 1.02
GARNL3-208ENST00000444677 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
GARNL3-208ENST00000444677 YEATS2Q9ULM3 1422 aa21.39■■□□□ 1.02
GARNL3-208ENST00000444677 CFDP1Q9UEE9 299 aaPredicted RBP21.39■■□□□ 1.01
GARNL3-208ENST00000444677 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.01
GARNL3-208ENST00000444677 TRAPPC8Q9Y2L5 1435 aa21.38■■□□□ 1.01
GARNL3-208ENST00000444677 EHBP1L1Q8N3D4 1523 aa21.37■■□□□ 1.01
GARNL3-208ENST00000444677 TIAM1Q13009 1591 aa21.36■■□□□ 1.01
GARNL3-208ENST00000444677 ZNF644Q9H582 1327 aaPredicted RBP21.36■■□□□ 1.01
GARNL3-208ENST00000444677 ZMYM4Q5VZL5 1548 aa21.36■■□□□ 1.01
GARNL3-208ENST00000444677 BCORL1Q5H9F3 1711 aa21.36■■□□□ 1.01
GARNL3-208ENST00000444677 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
GARNL3-208ENST00000444677 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
GARNL3-208ENST00000444677 ADAMTSL3P82987 1691 aa21.35■■□□□ 1.01
GARNL3-208ENST00000444677 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
GARNL3-208ENST00000444677 ARID4BQ4LE39 1312 aaPredicted RBP21.34■■□□□ 1.01
GARNL3-208ENST00000444677 LRRC9Q6ZRR7 1453 aa21.33■■□□□ 1.01
GARNL3-208ENST00000444677 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
GARNL3-208ENST00000444677 ZFYVE16Q7Z3T8 1539 aa21.33■■□□□ 1
GARNL3-208ENST00000444677 NCOA2Q15596 1464 aa21.32■■□□□ 1
GARNL3-208ENST00000444677 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
GARNL3-208ENST00000444677 MADDQ8WXG6 1647 aa21.32■■□□□ 1
GARNL3-208ENST00000444677 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
GARNL3-208ENST00000444677 ABCC1P33527 1531 aa21.3■■□□□ 1
GARNL3-208ENST00000444677 CDC42BPAQ5VT25 1732 aa21.3■■□□□ 1
GARNL3-208ENST00000444677 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
GARNL3-208ENST00000444677 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
GARNL3-208ENST00000444677 APLP2Q06481 763 aa21.29■■□□□ 1
GARNL3-208ENST00000444677 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
GARNL3-208ENST00000444677 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
GARNL3-208ENST00000444677 MAP3K1Q13233 1512 aa21.27■■□□□ 1
GARNL3-208ENST00000444677 MLECQ14165 292 aa21.26■□□□□ 0.99
GARNL3-208ENST00000444677 ATP10AO60312 1499 aa21.25■□□□□ 0.99
GARNL3-208ENST00000444677 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
GARNL3-208ENST00000444677 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
GARNL3-208ENST00000444677 KDM5CP41229 1560 aa21.24■□□□□ 0.99
GARNL3-208ENST00000444677 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
GARNL3-208ENST00000444677 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
GARNL3-208ENST00000444677 SPAG9O60271 1321 aaKnown RBP21.22■□□□□ 0.99
GARNL3-208ENST00000444677 PTPRMP28827 1452 aa21.21■□□□□ 0.99
GARNL3-208ENST00000444677 FER1L4A9Z1Z3 1794 aa21.21■□□□□ 0.99
GARNL3-208ENST00000444677 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
GARNL3-208ENST00000444677 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
GARNL3-208ENST00000444677 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
GARNL3-208ENST00000444677 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
GARNL3-208ENST00000444677 ABCA6Q8N139 1617 aa21.16■□□□□ 0.98
GARNL3-208ENST00000444677 DIP2CQ9Y2E4 1556 aa21.15■□□□□ 0.98
GARNL3-208ENST00000444677 CAMSAP2Q08AD1 1489 aa21.14■□□□□ 0.98
GARNL3-208ENST00000444677 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
GARNL3-208ENST00000444677 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
GARNL3-208ENST00000444677 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
GARNL3-208ENST00000444677 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
GARNL3-208ENST00000444677 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
GARNL3-208ENST00000444677 MIA2Q96PC5 1412 aa21.08■□□□□ 0.97
GARNL3-208ENST00000444677 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
GARNL3-208ENST00000444677 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
GARNL3-208ENST00000444677 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
GARNL3-208ENST00000444677 RTEL1-TNFRSF6BF6WH68 1400 aa21.04■□□□□ 0.96
GARNL3-208ENST00000444677 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
GARNL3-208ENST00000444677 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
GARNL3-208ENST00000444677 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
GARNL3-208ENST00000444677 INO80Q9ULG1 1556 aaPredicted RBP21.03■□□□□ 0.96
GARNL3-208ENST00000444677 A2MP01023 1474 aa21.03■□□□□ 0.96
GARNL3-208ENST00000444677 AGLP35573 1532 aa21.03■□□□□ 0.96
GARNL3-208ENST00000444677 LMTK3Q96Q04 1460 aa21.01■□□□□ 0.95
GARNL3-208ENST00000444677 FGD6Q6ZV73 1430 aa21.01■□□□□ 0.95
GARNL3-208ENST00000444677 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
GARNL3-208ENST00000444677 ARHGEF5Q12774 1597 aa20.99■□□□□ 0.95
GARNL3-208ENST00000444677 GGT6Q6P531 493 aa20.99■□□□□ 0.95
GARNL3-208ENST00000444677 ABCC5O15440 1437 aa20.96■□□□□ 0.95
GARNL3-208ENST00000444677 PREX1Q8TCU6 1659 aa20.96■□□□□ 0.95
GARNL3-208ENST00000444677 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.94
GARNL3-208ENST00000444677 ESF1Q9H501 851 aaKnown RBP20.95■□□□□ 0.94
GARNL3-208ENST00000444677 C3P01024 1663 aa20.95■□□□□ 0.94
GARNL3-208ENST00000444677 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
GARNL3-208ENST00000444677 KIF3BO15066 747 aa20.94■□□□□ 0.94
GARNL3-208ENST00000444677 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
GARNL3-208ENST00000444677 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
GARNL3-208ENST00000444677 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
GARNL3-208ENST00000444677 ADGBQ8N7X0 1667 aa20.91■□□□□ 0.94
GARNL3-208ENST00000444677 DAPK1P53355 1430 aa20.9■□□□□ 0.94
GARNL3-208ENST00000444677 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
GARNL3-208ENST00000444677 HSPA2P54652 639 aa20.87■□□□□ 0.93
GARNL3-208ENST00000444677 MAST1Q9Y2H9 1570 aa20.87■□□□□ 0.93
GARNL3-208ENST00000444677 ZMYM3Q14202 1370 aa20.86■□□□□ 0.93
GARNL3-208ENST00000444677 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
GARNL3-208ENST00000444677 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
GARNL3-208ENST00000444677 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
GARNL3-208ENST00000444677 KIF15Q9NS87 1388 aa20.84■□□□□ 0.93
GARNL3-208ENST00000444677 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
GARNL3-208ENST00000444677 SHANK2Q9UPX8 1470 aa20.82■□□□□ 0.92
GARNL3-208ENST00000444677 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
GARNL3-208ENST00000444677 DNMT1P26358 1616 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms