RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
CCDC197-202ENST00000444118 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
CCDC197-202ENST00000444118 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
CCDC197-202ENST00000444118 ABCC5O15440 1437 aa25.22■■□□□ 1.63
CCDC197-202ENST00000444118 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
CCDC197-202ENST00000444118 ABCC2Q92887 1545 aa25.2■■□□□ 1.62
CCDC197-202ENST00000444118 KDM6BO15054 1643 aa25.18■■□□□ 1.62
CCDC197-202ENST00000444118 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
CCDC197-202ENST00000444118 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
CCDC197-202ENST00000444118 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.61
CCDC197-202ENST00000444118 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
CCDC197-202ENST00000444118 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
CCDC197-202ENST00000444118 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
CCDC197-202ENST00000444118 RRP7BPQ9NSQ0 103 aa25.11■■□□□ 1.61
CCDC197-202ENST00000444118 CHIC2Q9UKJ5 165 aa25.11■■□□□ 1.61
CCDC197-202ENST00000444118 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
CCDC197-202ENST00000444118 UHRF1BP1LA0JNW5 1464 aa25.1■■□□□ 1.61
CCDC197-202ENST00000444118 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
CCDC197-202ENST00000444118 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.61
CCDC197-202ENST00000444118 DENND4BO75064 1496 aaPredicted RBP25.07■■□□□ 1.6
CCDC197-202ENST00000444118 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
CCDC197-202ENST00000444118 SIN3AQ96ST3 1273 aa25.05■■□□□ 1.6
CCDC197-202ENST00000444118 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
CCDC197-202ENST00000444118 ARHGEF5Q12774 1597 aa25.04■■□□□ 1.6
CCDC197-202ENST00000444118 TTC37Q6PGP7 1564 aa25.02■■□□□ 1.6
CCDC197-202ENST00000444118 NCOA1Q15788 1441 aa25.02■■□□□ 1.6
CCDC197-202ENST00000444118 KDM5BQ9UGL1 1544 aa25.02■■□□□ 1.6
CCDC197-202ENST00000444118 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
CCDC197-202ENST00000444118 SAMD9LQ8IVG5 1584 aa25■■□□□ 1.59
CCDC197-202ENST00000444118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
CCDC197-202ENST00000444118 MYT1Q01538 1121 aa24.97■■□□□ 1.59
CCDC197-202ENST00000444118 NEUROD1Q13562 356 aa24.96■■□□□ 1.59
CCDC197-202ENST00000444118 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
CCDC197-202ENST00000444118 MBD5Q9P267 1494 aa24.94■■□□□ 1.58
CCDC197-202ENST00000444118 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
CCDC197-202ENST00000444118 ANKRD30AQ9BXX3 1397 aa24.92■■□□□ 1.58
CCDC197-202ENST00000444118 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
CCDC197-202ENST00000444118 TONSLQ96HA7 1378 aa24.89■■□□□ 1.58
CCDC197-202ENST00000444118 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.57
CCDC197-202ENST00000444118 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
CCDC197-202ENST00000444118 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
CCDC197-202ENST00000444118 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
CCDC197-202ENST00000444118 ARHGAP5Q13017 1502 aa24.87■■□□□ 1.57
CCDC197-202ENST00000444118 MAST1Q9Y2H9 1570 aa24.87■■□□□ 1.57
CCDC197-202ENST00000444118 PZPP20742 1482 aa24.86■■□□□ 1.57
CCDC197-202ENST00000444118 SYCP2Q9BX26 1530 aa24.84■■□□□ 1.57
CCDC197-202ENST00000444118 ANKRD50Q9ULJ7 1429 aa24.84■■□□□ 1.57
CCDC197-202ENST00000444118 PLEKHH2Q8IVE3 1493 aa24.83■■□□□ 1.57
CCDC197-202ENST00000444118 KDM5DQ9BY66 1539 aa24.81■■□□□ 1.56
CCDC197-202ENST00000444118 KIAA1107Q9UPP5 1409 aa24.81■■□□□ 1.56
CCDC197-202ENST00000444118 RSPH4AQ5TD94 716 aa24.8■■□□□ 1.56
CCDC197-202ENST00000444118 ARAP3Q8WWN8 1544 aa24.8■■□□□ 1.56
CCDC197-202ENST00000444118 ANKRD30BQ9BXX2 1392 aa24.8■■□□□ 1.56
CCDC197-202ENST00000444118 PLCH2O75038 1416 aa24.78■■□□□ 1.56
CCDC197-202ENST00000444118 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
CCDC197-202ENST00000444118 PLXNC1O60486 1568 aa24.78■■□□□ 1.56
CCDC197-202ENST00000444118 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
CCDC197-202ENST00000444118 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
CCDC197-202ENST00000444118 HNRNPMP52272 730 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCDC197-202ENST00000444118 KIF15Q9NS87 1388 aa24.75■■□□□ 1.55
CCDC197-202ENST00000444118 WDR7Q9Y4E6 1490 aa24.75■■□□□ 1.55
CCDC197-202ENST00000444118 ABCC1P33527 1531 aa24.74■■□□□ 1.55
CCDC197-202ENST00000444118 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
CCDC197-202ENST00000444118 ABCA9Q8IUA7 1624 aa24.72■■□□□ 1.55
CCDC197-202ENST00000444118 TEX14Q8IWB6 1497 aa24.7■■□□□ 1.55
CCDC197-202ENST00000444118 MIER1Q8N108 512 aa24.7■■□□□ 1.54
CCDC197-202ENST00000444118 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
CCDC197-202ENST00000444118 KCNH8Q96L42 1107 aa24.68■■□□□ 1.54
CCDC197-202ENST00000444118 UNC13BO14795 1591 aa24.67■■□□□ 1.54
CCDC197-202ENST00000444118 FOXD1Q16676 465 aa24.67■■□□□ 1.54
CCDC197-202ENST00000444118 EFCAB2Q5VUJ9 269 aa24.63■■□□□ 1.53
CCDC197-202ENST00000444118 NUP155O75694 1391 aa24.61■■□□□ 1.53
CCDC197-202ENST00000444118 DUOX2Q9NRD8 1548 aa24.61■■□□□ 1.53
CCDC197-202ENST00000444118 ASXL2Q76L83 1435 aa24.59■■□□□ 1.53
CCDC197-202ENST00000444118 FAM135AQ9P2D6 1515 aa24.59■■□□□ 1.53
CCDC197-202ENST00000444118 L3MBTL2Q969R5 705 aa24.57■■□□□ 1.52
CCDC197-202ENST00000444118 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
CCDC197-202ENST00000444118 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
CCDC197-202ENST00000444118 PKD2Q13563 968 aa24.56■■□□□ 1.52
CCDC197-202ENST00000444118 ERBINQ96RT1 1412 aa24.56■■□□□ 1.52
CCDC197-202ENST00000444118 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
CCDC197-202ENST00000444118 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
CCDC197-202ENST00000444118 FANCAO15360 1455 aa24.53■■□□□ 1.52
CCDC197-202ENST00000444118 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
CCDC197-202ENST00000444118 INO80Q9ULG1 1556 aaPredicted RBP24.51■■□□□ 1.51
CCDC197-202ENST00000444118 NPM1P06748 294 aaKnown RBP eCLIP24.48■■□□□ 1.51
CCDC197-202ENST00000444118 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.51
CCDC197-202ENST00000444118 CFAP74Q9C0B2 1584 aa24.44■■□□□ 1.5
CCDC197-202ENST00000444118 DEPDC5O75140 1603 aa24.44■■□□□ 1.5
CCDC197-202ENST00000444118 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
CCDC197-202ENST00000444118 ADGRL1O94910 1474 aa24.44■■□□□ 1.5
CCDC197-202ENST00000444118 POLR1AO95602 1720 aaPredicted RBP24.43■■□□□ 1.5
CCDC197-202ENST00000444118 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
CCDC197-202ENST00000444118 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
CCDC197-202ENST00000444118 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
CCDC197-202ENST00000444118 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
CCDC197-202ENST00000444118 DDX10Q13206 875 aaKnown RBP24.39■■□□□ 1.5
CCDC197-202ENST00000444118 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.5
CCDC197-202ENST00000444118 EIF2AK4Q9P2K8 1649 aaKnown RBP24.38■■□□□ 1.49
CCDC197-202ENST00000444118 ATP10AO60312 1499 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms