RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
FN1-211ENST00000443816 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
FN1-211ENST00000443816 IRX6P78412 446 aaPredicted RBP14.4□□□□□ -0.1
FN1-211ENST00000443816 CFAP44Q96MT7 982 aa14.4□□□□□ -0.1
FN1-211ENST00000443816 FRAT1Q92837 279 aaPredicted RBP14.4□□□□□ -0.1
FN1-211ENST00000443816 SETD5Q9C0A6 1442 aa14.39□□□□□ -0.11
FN1-211ENST00000443816 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
FN1-211ENST00000443816 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
FN1-211ENST00000443816 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
FN1-211ENST00000443816 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
FN1-211ENST00000443816 NBR1Q14596 966 aa14.38□□□□□ -0.11
FN1-211ENST00000443816 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
FN1-211ENST00000443816 WASHC2CQ9Y4E1 1318 aa14.37□□□□□ -0.11
FN1-211ENST00000443816 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
FN1-211ENST00000443816 MIER1Q8N108 512 aa14.37□□□□□ -0.11
FN1-211ENST00000443816 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
FN1-211ENST00000443816 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
FN1-211ENST00000443816 MCCP23508 829 aa14.36□□□□□ -0.11
FN1-211ENST00000443816 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
FN1-211ENST00000443816 PKD2Q13563 968 aa14.35□□□□□ -0.11
FN1-211ENST00000443816 NUP155O75694 1391 aa14.35□□□□□ -0.11
FN1-211ENST00000443816 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
FN1-211ENST00000443816 KIF3BO15066 747 aa14.34□□□□□ -0.11
FN1-211ENST00000443816 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
FN1-211ENST00000443816 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
FN1-211ENST00000443816 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.11
FN1-211ENST00000443816 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.12
FN1-211ENST00000443816 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
FN1-211ENST00000443816 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
FN1-211ENST00000443816 IPO8O15397 1037 aaKnown RBP14.32□□□□□ -0.12
FN1-211ENST00000443816 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
FN1-211ENST00000443816 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
FN1-211ENST00000443816 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
FN1-211ENST00000443816 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
FN1-211ENST00000443816 NGDNQ8NEJ9 315 aaKnown RBP14.31□□□□□ -0.12
FN1-211ENST00000443816 G3V3G9 751 aa14.31□□□□□ -0.12
FN1-211ENST00000443816 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
FN1-211ENST00000443816 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
FN1-211ENST00000443816 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
FN1-211ENST00000443816 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
FN1-211ENST00000443816 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
FN1-211ENST00000443816 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
FN1-211ENST00000443816 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
FN1-211ENST00000443816 NRDCO43847 1150 aa14.27□□□□□ -0.12
FN1-211ENST00000443816 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.13
FN1-211ENST00000443816 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
FN1-211ENST00000443816 TAF7LQ5H9L4 462 aa14.27□□□□□ -0.13
FN1-211ENST00000443816 GPATCH3Q96I76 525 aa14.27□□□□□ -0.13
FN1-211ENST00000443816 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
FN1-211ENST00000443816 CLSTN1O94985 981 aa14.26□□□□□ -0.13
FN1-211ENST00000443816 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
FN1-211ENST00000443816 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
FN1-211ENST00000443816 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
FN1-211ENST00000443816 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
FN1-211ENST00000443816 EVA1CP58658 441 aa14.25□□□□□ -0.13
FN1-211ENST00000443816 AMPHP49418 695 aa14.25□□□□□ -0.13
FN1-211ENST00000443816 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
FN1-211ENST00000443816 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
FN1-211ENST00000443816 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
FN1-211ENST00000443816 STK31Q9BXU1 1019 aa14.23□□□□□ -0.13
FN1-211ENST00000443816 GORABQ5T7V8 394 aa14.23□□□□□ -0.13
FN1-211ENST00000443816 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
FN1-211ENST00000443816 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.132e-9■■□□□ 12.6
FN1-211ENST00000443816 RGS3P49796 1198 aa14.22□□□□□ -0.13
FN1-211ENST00000443816 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
FN1-211ENST00000443816 MEX3CQ5U5Q3 659 aaKnown RBP14.22□□□□□ -0.13
FN1-211ENST00000443816 DNTTIP2Q5QJE6 756 aaKnown RBP14.21□□□□□ -0.13
FN1-211ENST00000443816 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.14
FN1-211ENST00000443816 RALBP1Q15311 655 aa14.21□□□□□ -0.14
FN1-211ENST00000443816 PTPRGP23470 1445 aa14.21□□□□□ -0.14
FN1-211ENST00000443816 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
FN1-211ENST00000443816 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
FN1-211ENST00000443816 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
FN1-211ENST00000443816 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
FN1-211ENST00000443816 FOXD1Q16676 465 aa14.18□□□□□ -0.14
FN1-211ENST00000443816 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
FN1-211ENST00000443816 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
FN1-211ENST00000443816 L1TD1Q5T7N2 865 aaKnown RBP14.16□□□□□ -0.14
FN1-211ENST00000443816 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
FN1-211ENST00000443816 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
FN1-211ENST00000443816 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
FN1-211ENST00000443816 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
FN1-211ENST00000443816 RAB3GAP2Q9H2M9 1393 aa14.14□□□□□ -0.15
FN1-211ENST00000443816 HMMRO75330 724 aa14.13□□□□□ -0.15
FN1-211ENST00000443816 KIAA2012Q0VF49 1180 aa14.13□□□□□ -0.15
FN1-211ENST00000443816 CUX1P39880 1505 aa14.13□□□□□ -0.15
FN1-211ENST00000443816 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
FN1-211ENST00000443816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
FN1-211ENST00000443816 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
FN1-211ENST00000443816 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
FN1-211ENST00000443816 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
FN1-211ENST00000443816 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
FN1-211ENST00000443816 HTATSF1O43719 755 aaKnown RBP14.11□□□□□ -0.15
FN1-211ENST00000443816 FAM69CQ0P6D2 419 aa14.11□□□□□ -0.15
FN1-211ENST00000443816 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
FN1-211ENST00000443816 CCDC34Q96HJ3 373 aa14.11□□□□□ -0.15
FN1-211ENST00000443816 CCER2I3L3R5 266 aa14.11□□□□□ -0.15
FN1-211ENST00000443816 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
FN1-211ENST00000443816 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
FN1-211ENST00000443816 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms