RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
SP140-206ENST00000441657 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
SP140-206ENST00000441657 PIP4K2BP78356 416 aa11.08□□□□□ -0.64
SP140-206ENST00000441657 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
SP140-206ENST00000441657 ZNF335Q9H4Z2 1342 aaPredicted RBP11.07□□□□□ -0.64
SP140-206ENST00000441657 TOM1O60784 492 aa11.05□□□□□ -0.64
SP140-206ENST00000441657 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
SP140-206ENST00000441657 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
SP140-206ENST00000441657 DENND4BO75064 1496 aaPredicted RBP11.04□□□□□ -0.64
SP140-206ENST00000441657 ABCA9Q8IUA7 1624 aa11.03□□□□□ -0.64
SP140-206ENST00000441657 SIGLEC1Q9BZZ2 1709 aa11.03□□□□□ -0.64
SP140-206ENST00000441657 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
SP140-206ENST00000441657 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
SP140-206ENST00000441657 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
SP140-206ENST00000441657 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
SP140-206ENST00000441657 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
SP140-206ENST00000441657 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
SP140-206ENST00000441657 ZFYVE16Q7Z3T8 1539 aa11□□□□□ -0.65
SP140-206ENST00000441657 RICTORQ6R327 1708 aa11□□□□□ -0.65
SP140-206ENST00000441657 KIF27Q86VH2 1401 aa11□□□□□ -0.65
SP140-206ENST00000441657 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
SP140-206ENST00000441657 ABCA8O94911 1581 aa10.99□□□□□ -0.65
SP140-206ENST00000441657 MAGI2Q86UL8 1455 aa10.98□□□□□ -0.65
SP140-206ENST00000441657 ZMYM4Q5VZL5 1548 aa10.97□□□□□ -0.65
SP140-206ENST00000441657 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
SP140-206ENST00000441657 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
SP140-206ENST00000441657 TRAPPC8Q9Y2L5 1435 aa10.94□□□□□ -0.66
SP140-206ENST00000441657 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
SP140-206ENST00000441657 ARID3CA6NKF2 412 aa10.93□□□□□ -0.66
SP140-206ENST00000441657 PKD2Q13563 968 aa10.93□□□□□ -0.66
SP140-206ENST00000441657 ATP10AO60312 1499 aa10.93□□□□□ -0.66
SP140-206ENST00000441657 ATP10BO94823 1461 aa10.92□□□□□ -0.66
SP140-206ENST00000441657 C9orf84Q5VXU9 1444 aa10.91□□□□□ -0.66
SP140-206ENST00000441657 UPF1Q92900 1129 aaKnown RBP eCLIP10.9□□□□□ -0.66
SP140-206ENST00000441657 PTPRKQ15262 1439 aa10.9□□□□□ -0.66
SP140-206ENST00000441657 HECW1Q76N89 1606 aa10.89□□□□□ -0.67
SP140-206ENST00000441657 NPM3O75607 178 aaKnown RBP10.89□□□□□ -0.67
SP140-206ENST00000441657 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
SP140-206ENST00000441657 C3P01024 1663 aa10.89□□□□□ -0.67
SP140-206ENST00000441657 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
SP140-206ENST00000441657 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
SP140-206ENST00000441657 SRCAPQ6ZRS2 3230 aa10.87□□□□□ -0.67
SP140-206ENST00000441657 CPS1P31327 1500 aa10.87□□□□□ -0.67
SP140-206ENST00000441657 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
SP140-206ENST00000441657 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
SP140-206ENST00000441657 PLA2R1Q13018 1463 aa10.84□□□□□ -0.67
SP140-206ENST00000441657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
SP140-206ENST00000441657 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
SP140-206ENST00000441657 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
SP140-206ENST00000441657 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
SP140-206ENST00000441657 ALKQ9UM73 1620 aa10.82□□□□□ -0.68
SP140-206ENST00000441657 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
SP140-206ENST00000441657 NPATQ14207 1427 aa10.81□□□□□ -0.68
SP140-206ENST00000441657 SCAPERQ9BY12 1400 aa10.81□□□□□ -0.68
SP140-206ENST00000441657 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
SP140-206ENST00000441657 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
SP140-206ENST00000441657 AGLP35573 1532 aa10.76□□□□□ -0.69
SP140-206ENST00000441657 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
SP140-206ENST00000441657 PLEKHD1A6NEE1 506 aa10.75□□□□□ -0.69
SP140-206ENST00000441657 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
SP140-206ENST00000441657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.73□□□□□ -0.69
SP140-206ENST00000441657 ZNF142P52746 1687 aaPredicted RBP10.73□□□□□ -0.69
SP140-206ENST00000441657 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
SP140-206ENST00000441657 REREQ9P2R6 1566 aa10.72□□□□□ -0.69
SP140-206ENST00000441657 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
SP140-206ENST00000441657 TRIM52Q96A61 297 aa10.71□□□□□ -0.69
SP140-206ENST00000441657 CTTNBP2Q8WZ74 1663 aa10.7□□□□□ -0.7
SP140-206ENST00000441657 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
SP140-206ENST00000441657 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
SP140-206ENST00000441657 ZNF518AQ6AHZ1 1483 aa10.69□□□□□ -0.7
SP140-206ENST00000441657 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
SP140-206ENST00000441657 RAPGEF6Q8TEU7 1601 aa10.69□□□□□ -0.7
SP140-206ENST00000441657 DIP2CQ9Y2E4 1556 aa10.69□□□□□ -0.7
SP140-206ENST00000441657 PLCH2O75038 1416 aa10.68□□□□□ -0.7
SP140-206ENST00000441657 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
SP140-206ENST00000441657 AFAP1Q8N556 730 aa10.68□□□□□ -0.7
SP140-206ENST00000441657 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
SP140-206ENST00000441657 VWDEQ8N2E2 1590 aa10.68□□□□□ -0.7
SP140-206ENST00000441657 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
SP140-206ENST00000441657 ZRANB1Q9UGI0 708 aa10.67□□□□□ -0.7
SP140-206ENST00000441657 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
SP140-206ENST00000441657 ZNF772Q68DY9 489 aaPredicted RBP10.65□□□□□ -0.7
SP140-206ENST00000441657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.7
SP140-206ENST00000441657 NUP153P49790 1475 aaKnown RBP10.65□□□□□ -0.7
SP140-206ENST00000441657 KDM5CP41229 1560 aa10.65□□□□□ -0.71
SP140-206ENST00000441657 NEURL4Q96JN8 1562 aa10.65□□□□□ -0.71
SP140-206ENST00000441657 POLR1AO95602 1720 aaPredicted RBP10.64□□□□□ -0.71
SP140-206ENST00000441657 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
SP140-206ENST00000441657 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
SP140-206ENST00000441657 FAM135BQ49AJ0 1406 aa10.64□□□□□ -0.71
SP140-206ENST00000441657 A2ML1A8K2U0 1454 aa10.63□□□□□ -0.71
SP140-206ENST00000441657 ZBTB22O15209 634 aa10.63□□□□□ -0.71
SP140-206ENST00000441657 RXRBP28702 533 aa10.63□□□□□ -0.71
SP140-206ENST00000441657 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
SP140-206ENST00000441657 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
SP140-206ENST00000441657 MLH3Q9UHC1 1453 aa10.61□□□□□ -0.71
SP140-206ENST00000441657 CDK12Q9NYV4 1490 aaPredicted RBP10.6□□□□□ -0.71
SP140-206ENST00000441657 SYNMO15061 1565 aa10.59□□□□□ -0.71
SP140-206ENST00000441657 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
SP140-206ENST00000441657 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms