RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
UBE2D4-203ENST00000440652 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
UBE2D4-203ENST00000440652 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
UBE2D4-203ENST00000440652 GSE1Q14687 1217 aa12.15□□□□□ -0.46
UBE2D4-203ENST00000440652 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
UBE2D4-203ENST00000440652 PYGBP11216 843 aa12.14□□□□□ -0.47
UBE2D4-203ENST00000440652 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
UBE2D4-203ENST00000440652 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
UBE2D4-203ENST00000440652 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
UBE2D4-203ENST00000440652 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
UBE2D4-203ENST00000440652 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
UBE2D4-203ENST00000440652 SHROOM2Q13796 1616 aa12.1□□□□□ -0.47
UBE2D4-203ENST00000440652 C7P10643 843 aa12.09□□□□□ -0.47
UBE2D4-203ENST00000440652 NUP160Q12769 1436 aa12.09□□□□□ -0.47
UBE2D4-203ENST00000440652 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
UBE2D4-203ENST00000440652 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
UBE2D4-203ENST00000440652 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
UBE2D4-203ENST00000440652 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
UBE2D4-203ENST00000440652 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
UBE2D4-203ENST00000440652 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
UBE2D4-203ENST00000440652 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
UBE2D4-203ENST00000440652 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
UBE2D4-203ENST00000440652 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
UBE2D4-203ENST00000440652 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
UBE2D4-203ENST00000440652 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
UBE2D4-203ENST00000440652 RUSC2Q8N2Y8 1516 aa12□□□□□ -0.49
UBE2D4-203ENST00000440652 BIVM-ERCC5R4GMW8 1640 aa11.99□□□□□ -0.49
UBE2D4-203ENST00000440652 KDM6BO15054 1643 aa11.98□□□□□ -0.49
UBE2D4-203ENST00000440652 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
UBE2D4-203ENST00000440652 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
UBE2D4-203ENST00000440652 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 IER5LQ5T953 404 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
UBE2D4-203ENST00000440652 MAPKBP1O60336 1514 aa11.96□□□□□ -0.5
UBE2D4-203ENST00000440652 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
UBE2D4-203ENST00000440652 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
UBE2D4-203ENST00000440652 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
UBE2D4-203ENST00000440652 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
UBE2D4-203ENST00000440652 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-203ENST00000440652 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-203ENST00000440652 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
UBE2D4-203ENST00000440652 PSEN1P49768 467 aa11.89□□□□□ -0.51
UBE2D4-203ENST00000440652 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
UBE2D4-203ENST00000440652 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
UBE2D4-203ENST00000440652 SEC24BO95487 1268 aa11.85□□□□□ -0.51
UBE2D4-203ENST00000440652 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
UBE2D4-203ENST00000440652 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
UBE2D4-203ENST00000440652 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
UBE2D4-203ENST00000440652 PPRC1Q5VV67 1664 aaKnown RBP11.83□□□□□ -0.52
UBE2D4-203ENST00000440652 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
UBE2D4-203ENST00000440652 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
UBE2D4-203ENST00000440652 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
UBE2D4-203ENST00000440652 PLCG2P16885 1265 aa11.79□□□□□ -0.52
UBE2D4-203ENST00000440652 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
UBE2D4-203ENST00000440652 CUL7Q14999 1698 aa11.78□□□□□ -0.52
UBE2D4-203ENST00000440652 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
UBE2D4-203ENST00000440652 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
UBE2D4-203ENST00000440652 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
UBE2D4-203ENST00000440652 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
UBE2D4-203ENST00000440652 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
UBE2D4-203ENST00000440652 PTPRGP23470 1445 aa11.74□□□□□ -0.53
UBE2D4-203ENST00000440652 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
UBE2D4-203ENST00000440652 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-203ENST00000440652 PKD2Q13563 968 aa11.72□□□□□ -0.53
UBE2D4-203ENST00000440652 MAP3K4Q9Y6R4 1608 aa11.71□□□□□ -0.53
UBE2D4-203ENST00000440652 GLI2P10070 1586 aa11.71□□□□□ -0.53
UBE2D4-203ENST00000440652 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
UBE2D4-203ENST00000440652 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
UBE2D4-203ENST00000440652 IGF1RP08069 1367 aa11.7□□□□□ -0.54
UBE2D4-203ENST00000440652 IQGAP2Q13576 1575 aa11.7□□□□□ -0.54
UBE2D4-203ENST00000440652 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
UBE2D4-203ENST00000440652 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
UBE2D4-203ENST00000440652 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
UBE2D4-203ENST00000440652 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
UBE2D4-203ENST00000440652 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
UBE2D4-203ENST00000440652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBE2D4-203ENST00000440652 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
UBE2D4-203ENST00000440652 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
UBE2D4-203ENST00000440652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
UBE2D4-203ENST00000440652 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
UBE2D4-203ENST00000440652 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
UBE2D4-203ENST00000440652 UHRF1BP1LA0JNW5 1464 aa11.65□□□□□ -0.54
UBE2D4-203ENST00000440652 UACAQ9BZF9 1416 aa11.65□□□□□ -0.54
UBE2D4-203ENST00000440652 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
UBE2D4-203ENST00000440652 KIF21BO75037 1637 aa11.64□□□□□ -0.55
UBE2D4-203ENST00000440652 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
UBE2D4-203ENST00000440652 KDM5BQ9UGL1 1544 aa11.63□□□□□ -0.55
UBE2D4-203ENST00000440652 CARMIL1Q5VZK9 1371 aa11.63□□□□□ -0.55
UBE2D4-203ENST00000440652 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
UBE2D4-203ENST00000440652 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
UBE2D4-203ENST00000440652 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
UBE2D4-203ENST00000440652 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
UBE2D4-203ENST00000440652 RGL2O15211 777 aa11.6□□□□□ -0.55
UBE2D4-203ENST00000440652 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
UBE2D4-203ENST00000440652 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
UBE2D4-203ENST00000440652 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
UBE2D4-203ENST00000440652 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms