RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
PTPA-221ENST00000440346 ZFYVE16Q7Z3T8 1539 aa11.55□□□□□ -0.56
PTPA-221ENST00000440346 MYO5CQ9NQX4 1742 aa11.55□□□□□ -0.56
PTPA-221ENST00000440346 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
PTPA-221ENST00000440346 LRRIQ1Q96JM4 1722 aa11.54□□□□□ -0.56
PTPA-221ENST00000440346 ARID4BQ4LE39 1312 aaPredicted RBP11.54□□□□□ -0.56
PTPA-221ENST00000440346 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
PTPA-221ENST00000440346 FER1L4A9Z1Z3 1794 aa11.53□□□□□ -0.56
PTPA-221ENST00000440346 MAGI2Q86UL8 1455 aa11.52□□□□□ -0.56
PTPA-221ENST00000440346 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
PTPA-221ENST00000440346 PLCH2O75038 1416 aa11.52□□□□□ -0.57
PTPA-221ENST00000440346 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
PTPA-221ENST00000440346 KIF14Q15058 1648 aa11.51□□□□□ -0.57
PTPA-221ENST00000440346 POGZQ7Z3K3 1410 aa11.51□□□□□ -0.57
PTPA-221ENST00000440346 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
PTPA-221ENST00000440346 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
PTPA-221ENST00000440346 SCAPERQ9BY12 1400 aa11.49□□□□□ -0.57
PTPA-221ENST00000440346 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
PTPA-221ENST00000440346 CDC42BPBQ9Y5S2 1711 aa11.47□□□□□ -0.57
PTPA-221ENST00000440346 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
PTPA-221ENST00000440346 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
PTPA-221ENST00000440346 KDM5CP41229 1560 aa11.45□□□□□ -0.58
PTPA-221ENST00000440346 ATP10AO60312 1499 aa11.45□□□□□ -0.58
PTPA-221ENST00000440346 CLIP1P30622 1438 aa11.45□□□□□ -0.58
PTPA-221ENST00000440346 TROQ12816 1431 aaPredicted RBP11.45□□□□□ -0.58
PTPA-221ENST00000440346 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
PTPA-221ENST00000440346 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
PTPA-221ENST00000440346 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
PTPA-221ENST00000440346 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
PTPA-221ENST00000440346 HSPA2P54652 639 aa11.44□□□□□ -0.58
PTPA-221ENST00000440346 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
PTPA-221ENST00000440346 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
PTPA-221ENST00000440346 PREX2Q70Z35 1606 aa11.43□□□□□ -0.58
PTPA-221ENST00000440346 ARHGAP5Q13017 1502 aa11.43□□□□□ -0.58
PTPA-221ENST00000440346 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
PTPA-221ENST00000440346 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
PTPA-221ENST00000440346 MLECQ14165 292 aa11.42□□□□□ -0.58
PTPA-221ENST00000440346 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
PTPA-221ENST00000440346 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
PTPA-221ENST00000440346 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
PTPA-221ENST00000440346 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
PTPA-221ENST00000440346 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
PTPA-221ENST00000440346 ITSN2Q9NZM3 1697 aa11.41□□□□□ -0.58
PTPA-221ENST00000440346 STRCQ7RTU9 1775 aa11.4□□□□□ -0.58
PTPA-221ENST00000440346 ABCC1P33527 1531 aa11.4□□□□□ -0.59
PTPA-221ENST00000440346 AFAP1Q8N556 730 aa11.39□□□□□ -0.59
PTPA-221ENST00000440346 KIDINS220Q9ULH0 1771 aa11.39□□□□□ -0.59
PTPA-221ENST00000440346 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
PTPA-221ENST00000440346 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
PTPA-221ENST00000440346 C3P01024 1663 aa11.38□□□□□ -0.59
PTPA-221ENST00000440346 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
PTPA-221ENST00000440346 TRAPPC8Q9Y2L5 1435 aa11.36□□□□□ -0.59
PTPA-221ENST00000440346 AGLP35573 1532 aa11.36□□□□□ -0.59
PTPA-221ENST00000440346 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
PTPA-221ENST00000440346 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
PTPA-221ENST00000440346 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
PTPA-221ENST00000440346 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
PTPA-221ENST00000440346 UHRF1BP1Q6BDS2 1440 aa11.32□□□□□ -0.6
PTPA-221ENST00000440346 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
PTPA-221ENST00000440346 MROH2AA6NES4 1674 aa11.31□□□□□ -0.6
PTPA-221ENST00000440346 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
PTPA-221ENST00000440346 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
PTPA-221ENST00000440346 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
PTPA-221ENST00000440346 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
PTPA-221ENST00000440346 INO80Q9ULG1 1556 aaPredicted RBP11.28□□□□□ -0.6
PTPA-221ENST00000440346 MAP3K1Q13233 1512 aa11.27□□□□□ -0.61
PTPA-221ENST00000440346 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
PTPA-221ENST00000440346 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
PTPA-221ENST00000440346 ATP7AQ04656 1500 aa11.26□□□□□ -0.61
PTPA-221ENST00000440346 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
PTPA-221ENST00000440346 PTPRTO14522 1441 aa11.26□□□□□ -0.61
PTPA-221ENST00000440346 CLTCQ00610 1675 aaKnown RBP11.25□□□□□ -0.61
PTPA-221ENST00000440346 KIAA1107Q9UPP5 1409 aa11.25□□□□□ -0.61
PTPA-221ENST00000440346 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
PTPA-221ENST00000440346 NPATQ14207 1427 aa11.24□□□□□ -0.61
PTPA-221ENST00000440346 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
PTPA-221ENST00000440346 PLEKHH2Q8IVE3 1493 aa11.24□□□□□ -0.61
PTPA-221ENST00000440346 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
PTPA-221ENST00000440346 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
PTPA-221ENST00000440346 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
PTPA-221ENST00000440346 ZNF777Q9ULD5 760 aaPredicted RBP11.23□□□□□ -0.61
PTPA-221ENST00000440346 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
PTPA-221ENST00000440346 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■■□□□ 14.1
PTPA-221ENST00000440346 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
PTPA-221ENST00000440346 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
PTPA-221ENST00000440346 MYO3AQ8NEV4 1616 aa11.22□□□□□ -0.61
PTPA-221ENST00000440346 A2MP01023 1474 aa11.21□□□□□ -0.61
PTPA-221ENST00000440346 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
PTPA-221ENST00000440346 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
PTPA-221ENST00000440346 CFDP1Q9UEE9 299 aaPredicted RBP11.2□□□□□ -0.62
PTPA-221ENST00000440346 MTUS2Q5JR59 1369 aa11.19□□□□□ -0.62
PTPA-221ENST00000440346 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
PTPA-221ENST00000440346 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
PTPA-221ENST00000440346 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
PTPA-221ENST00000440346 CEP170BQ9Y4F5 1589 aaPredicted RBP11.18□□□□□ -0.62
PTPA-221ENST00000440346 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
PTPA-221ENST00000440346 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
PTPA-221ENST00000440346 PLA2R1Q13018 1463 aa11.16□□□□□ -0.62
PTPA-221ENST00000440346 LRRC9Q6ZRR7 1453 aa11.16□□□□□ -0.62
PTPA-221ENST00000440346 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms