RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 SCAPERQ9BY12 1400 aa29.16■■■□□ 2.26
HDAC7-213ENST00000440293 YEATS2Q9ULM3 1422 aa29.14■■■□□ 2.26
HDAC7-213ENST00000440293 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
HDAC7-213ENST00000440293 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
HDAC7-213ENST00000440293 RIMS1Q86UR5 1692 aaKnown RBP29.11■■■□□ 2.25
HDAC7-213ENST00000440293 ATP10AO60312 1499 aa29.08■■■□□ 2.25
HDAC7-213ENST00000440293 CLIP1P30622 1438 aa29.07■■■□□ 2.24
HDAC7-213ENST00000440293 ATP1B4Q9UN42 357 aaPredicted RBP29.06■■■□□ 2.24
HDAC7-213ENST00000440293 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
HDAC7-213ENST00000440293 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
HDAC7-213ENST00000440293 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.23
HDAC7-213ENST00000440293 ZNF518AQ6AHZ1 1483 aa29.01■■■□□ 2.23
HDAC7-213ENST00000440293 SIGLEC1Q9BZZ2 1709 aa29■■■□□ 2.23
HDAC7-213ENST00000440293 KIF14Q15058 1648 aa28.99■■■□□ 2.23
HDAC7-213ENST00000440293 ARHGEF12Q9NZN5 1544 aa28.99■■■□□ 2.23
HDAC7-213ENST00000440293 MLECQ14165 292 aa28.98■■■□□ 2.23
HDAC7-213ENST00000440293 HSPA2P54652 639 aa28.96■■■□□ 2.23
HDAC7-213ENST00000440293 FER1L4A9Z1Z3 1794 aa28.93■■■□□ 2.22
HDAC7-213ENST00000440293 KDM5CP41229 1560 aa28.93■■■□□ 2.22
HDAC7-213ENST00000440293 ARHGAP5Q13017 1502 aa28.92■■■□□ 2.22
HDAC7-213ENST00000440293 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
HDAC7-213ENST00000440293 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
HDAC7-213ENST00000440293 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
HDAC7-213ENST00000440293 MLH3Q9UHC1 1453 aa28.88■■■□□ 2.21
HDAC7-213ENST00000440293 REREQ9P2R6 1566 aa28.88■■■□□ 2.21
HDAC7-213ENST00000440293 CCDC18Q5T9S5 1454 aa28.87■■■□□ 2.21
HDAC7-213ENST00000440293 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
HDAC7-213ENST00000440293 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
HDAC7-213ENST00000440293 CERKQ8TCT0 537 aa28.82■■■□□ 2.2
HDAC7-213ENST00000440293 PREX1Q8TCU6 1659 aa28.8■■■□□ 2.2
HDAC7-213ENST00000440293 MYT1LQ9UL68 1186 aa28.8■■■□□ 2.2
HDAC7-213ENST00000440293 DIP2CQ9Y2E4 1556 aa28.79■■■□□ 2.2
HDAC7-213ENST00000440293 AGLP35573 1532 aa28.79■■■□□ 2.2
HDAC7-213ENST00000440293 CEBPAP49715 358 aaPredicted RBP28.78■■■□□ 2.2
HDAC7-213ENST00000440293 LRRIQ1Q96JM4 1722 aa28.77■■■□□ 2.2
HDAC7-213ENST00000440293 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
HDAC7-213ENST00000440293 UHRF1BP1Q6BDS2 1440 aa28.76■■■□□ 2.19
HDAC7-213ENST00000440293 PREX2Q70Z35 1606 aa28.76■■■□□ 2.19
HDAC7-213ENST00000440293 FYCO1Q9BQS8 1478 aa28.75■■■□□ 2.19
HDAC7-213ENST00000440293 SETD1BQ9UPS6 1966 aaKnown RBP28.75■■■□□ 2.19
HDAC7-213ENST00000440293 ABCC1P33527 1531 aa28.74■■■□□ 2.19
HDAC7-213ENST00000440293 TRAPPC8Q9Y2L5 1435 aa28.73■■■□□ 2.19
HDAC7-213ENST00000440293 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
HDAC7-213ENST00000440293 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
HDAC7-213ENST00000440293 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
HDAC7-213ENST00000440293 ITSN2Q9NZM3 1697 aa28.65■■■□□ 2.18
HDAC7-213ENST00000440293 PTPRTO14522 1441 aa28.63■■■□□ 2.17
HDAC7-213ENST00000440293 KIDINS220Q9ULH0 1771 aa28.61■■■□□ 2.17
HDAC7-213ENST00000440293 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
HDAC7-213ENST00000440293 STRCQ7RTU9 1775 aa28.6■■■□□ 2.17
HDAC7-213ENST00000440293 CDC42BPAQ5VT25 1732 aa28.6■■■□□ 2.17
HDAC7-213ENST00000440293 GPATCH8Q9UKJ3 1502 aaKnown RBP28.59■■■□□ 2.17
HDAC7-213ENST00000440293 C3P01024 1663 aa28.59■■■□□ 2.17
HDAC7-213ENST00000440293 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
HDAC7-213ENST00000440293 SPAG9O60271 1321 aaKnown RBP28.57■■■□□ 2.16
HDAC7-213ENST00000440293 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
HDAC7-213ENST00000440293 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
HDAC7-213ENST00000440293 NPATQ14207 1427 aa28.56■■■□□ 2.16
HDAC7-213ENST00000440293 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
HDAC7-213ENST00000440293 CFDP1Q9UEE9 299 aaPredicted RBP28.52■■■□□ 2.16
HDAC7-213ENST00000440293 SYCP2Q9BX26 1530 aa28.5■■■□□ 2.15
HDAC7-213ENST00000440293 HNRNPMP52272 730 aaKnown RBP eCLIP28.5■■■□□ 2.15
HDAC7-213ENST00000440293 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
HDAC7-213ENST00000440293 ZMYM3Q14202 1370 aa28.5■■■□□ 2.15
HDAC7-213ENST00000440293 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
HDAC7-213ENST00000440293 MROH2AA6NES4 1674 aa28.49■■■□□ 2.15
HDAC7-213ENST00000440293 CCNB3Q8WWL7 1395 aa28.49■■■□□ 2.15
HDAC7-213ENST00000440293 NCOA1Q15788 1441 aa28.48■■■□□ 2.15
HDAC7-213ENST00000440293 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
HDAC7-213ENST00000440293 IQSEC2Q5JU85 1478 aa28.45■■■□□ 2.14
HDAC7-213ENST00000440293 A2MP01023 1474 aa28.43■■■□□ 2.14
HDAC7-213ENST00000440293 PLXNC1O60486 1568 aa28.42■■■□□ 2.14
HDAC7-213ENST00000440293 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
HDAC7-213ENST00000440293 APLP2Q06481 763 aa28.39■■■□□ 2.14
HDAC7-213ENST00000440293 LTBP4Q8N2S1 1624 aa28.38■■■□□ 2.13
HDAC7-213ENST00000440293 RTEL1-TNFRSF6BF6WH68 1400 aa28.35■■■□□ 2.13
HDAC7-213ENST00000440293 PKD2Q13563 968 aa28.35■■■□□ 2.13
HDAC7-213ENST00000440293 CAMSAP1Q5T5Y3 1602 aa28.35■■■□□ 2.13
HDAC7-213ENST00000440293 SUPT6HQ7KZ85 1726 aaKnown RBP28.35■■■□□ 2.13
HDAC7-213ENST00000440293 PLA2R1Q13018 1463 aa28.34■■■□□ 2.13
HDAC7-213ENST00000440293 PTPRKQ15262 1439 aa28.33■■■□□ 2.13
HDAC7-213ENST00000440293 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
HDAC7-213ENST00000440293 TIAM1Q13009 1591 aa28.33■■■□□ 2.12
HDAC7-213ENST00000440293 GGT6Q6P531 493 aa28.32■■■□□ 2.12
HDAC7-213ENST00000440293 MBD5Q9P267 1494 aa28.32■■■□□ 2.12
HDAC7-213ENST00000440293 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
HDAC7-213ENST00000440293 RSPH4AQ5TD94 716 aa28.31■■■□□ 2.12
HDAC7-213ENST00000440293 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
HDAC7-213ENST00000440293 ADGBQ8N7X0 1667 aa28.29■■■□□ 2.12
HDAC7-213ENST00000440293 CLTCQ00610 1675 aaKnown RBP28.28■■■□□ 2.12
HDAC7-213ENST00000440293 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
HDAC7-213ENST00000440293 DHX29Q7Z478 1369 aaKnown RBP28.27■■■□□ 2.12
HDAC7-213ENST00000440293 ZNF142P52746 1687 aaPredicted RBP28.27■■■□□ 2.12
HDAC7-213ENST00000440293 ZNF644Q9H582 1327 aaPredicted RBP28.26■■■□□ 2.11
HDAC7-213ENST00000440293 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
HDAC7-213ENST00000440293 TCOF1Q13428 1488 aaKnown RBP28.25■■■□□ 2.11
HDAC7-213ENST00000440293 DISP3Q9P2K9 1392 aa28.24■■■□□ 2.11
HDAC7-213ENST00000440293 CEP170BQ9Y4F5 1589 aaPredicted RBP28.24■■■□□ 2.11
HDAC7-213ENST00000440293 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
HDAC7-213ENST00000440293 FAM135AQ9P2D6 1515 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms