RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.51
PDE4A-204ENST00000440014 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.51
PDE4A-204ENST00000440014 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
PDE4A-204ENST00000440014 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
PDE4A-204ENST00000440014 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
PDE4A-204ENST00000440014 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
PDE4A-204ENST00000440014 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
PDE4A-204ENST00000440014 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
PDE4A-204ENST00000440014 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
PDE4A-204ENST00000440014 NAIPQ13075 1403 aa18.17■□□□□ 0.5
PDE4A-204ENST00000440014 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
PDE4A-204ENST00000440014 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
PDE4A-204ENST00000440014 CNTLNQ9NXG0 1405 aa18.15■□□□□ 0.5
PDE4A-204ENST00000440014 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
PDE4A-204ENST00000440014 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
PDE4A-204ENST00000440014 UHRF1BP1LA0JNW5 1464 aa18.15■□□□□ 0.5
PDE4A-204ENST00000440014 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
PDE4A-204ENST00000440014 ABCA8O94911 1581 aa18.14■□□□□ 0.49
PDE4A-204ENST00000440014 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
PDE4A-204ENST00000440014 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
PDE4A-204ENST00000440014 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
PDE4A-204ENST00000440014 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.497e-8■■■■■ 74.7
PDE4A-204ENST00000440014 ABCC2Q92887 1545 aa18.12■□□□□ 0.49
PDE4A-204ENST00000440014 ZBED9Q6R2W3 1325 aa18.11■□□□□ 0.49
PDE4A-204ENST00000440014 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
PDE4A-204ENST00000440014 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
PDE4A-204ENST00000440014 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
PDE4A-204ENST00000440014 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
PDE4A-204ENST00000440014 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.49
PDE4A-204ENST00000440014 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
PDE4A-204ENST00000440014 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
PDE4A-204ENST00000440014 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
PDE4A-204ENST00000440014 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDE4A-204ENST00000440014 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
PDE4A-204ENST00000440014 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
PDE4A-204ENST00000440014 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.48
PDE4A-204ENST00000440014 DENND4BO75064 1496 aaPredicted RBP18.02■□□□□ 0.47
PDE4A-204ENST00000440014 C11orf95C9JLR9 678 aaPredicted RBP18.01■□□□□ 0.47
PDE4A-204ENST00000440014 NBR1Q14596 966 aa18.01■□□□□ 0.47
PDE4A-204ENST00000440014 RRP7BPQ9NSQ0 103 aa18.01■□□□□ 0.47
PDE4A-204ENST00000440014 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
PDE4A-204ENST00000440014 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
PDE4A-204ENST00000440014 LRRIQ1Q96JM4 1722 aa18■□□□□ 0.47
PDE4A-204ENST00000440014 ATP10BO94823 1461 aa17.99■□□□□ 0.47
PDE4A-204ENST00000440014 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
PDE4A-204ENST00000440014 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
PDE4A-204ENST00000440014 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
PDE4A-204ENST00000440014 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
PDE4A-204ENST00000440014 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
PDE4A-204ENST00000440014 ARID3CA6NKF2 412 aa17.95■□□□□ 0.46
PDE4A-204ENST00000440014 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
PDE4A-204ENST00000440014 EPRSP07814 1512 aaKnown RBP17.95■□□□□ 0.46
PDE4A-204ENST00000440014 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
PDE4A-204ENST00000440014 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
PDE4A-204ENST00000440014 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
PDE4A-204ENST00000440014 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
PDE4A-204ENST00000440014 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
PDE4A-204ENST00000440014 IPO9Q96P70 1041 aaKnown RBP17.92■□□□□ 0.46
PDE4A-204ENST00000440014 KDM6BO15054 1643 aa17.92■□□□□ 0.46
PDE4A-204ENST00000440014 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
PDE4A-204ENST00000440014 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
PDE4A-204ENST00000440014 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
PDE4A-204ENST00000440014 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
PDE4A-204ENST00000440014 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
PDE4A-204ENST00000440014 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
PDE4A-204ENST00000440014 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
PDE4A-204ENST00000440014 POLR1AO95602 1720 aaPredicted RBP17.88■□□□□ 0.45
PDE4A-204ENST00000440014 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
PDE4A-204ENST00000440014 FOXD1Q16676 465 aa17.88■□□□□ 0.45
PDE4A-204ENST00000440014 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
PDE4A-204ENST00000440014 ZBTB47Q9UFB7 747 aaPredicted RBP17.87■□□□□ 0.45
PDE4A-204ENST00000440014 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
PDE4A-204ENST00000440014 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
PDE4A-204ENST00000440014 PLEKHD1A6NEE1 506 aa17.86■□□□□ 0.45
PDE4A-204ENST00000440014 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
PDE4A-204ENST00000440014 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
PDE4A-204ENST00000440014 ABCC10Q5T3U5 1492 aa17.85■□□□□ 0.45
PDE4A-204ENST00000440014 ANKRD30BQ9BXX2 1392 aa17.84■□□□□ 0.45
PDE4A-204ENST00000440014 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
PDE4A-204ENST00000440014 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
PDE4A-204ENST00000440014 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
PDE4A-204ENST00000440014 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
PDE4A-204ENST00000440014 GLI2P10070 1586 aa17.79■□□□□ 0.44
PDE4A-204ENST00000440014 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
PDE4A-204ENST00000440014 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
PDE4A-204ENST00000440014 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
PDE4A-204ENST00000440014 KIF13AQ9H1H9 1805 aa17.77■□□□□ 0.43
PDE4A-204ENST00000440014 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
PDE4A-204ENST00000440014 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
PDE4A-204ENST00000440014 IL27Q8NEV9 243 aa17.73■□□□□ 0.43
PDE4A-204ENST00000440014 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
PDE4A-204ENST00000440014 KIF14Q15058 1648 aa17.72■□□□□ 0.43
PDE4A-204ENST00000440014 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
PDE4A-204ENST00000440014 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
PDE4A-204ENST00000440014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.436e-7■■■■□ 19.9
PDE4A-204ENST00000440014 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
PDE4A-204ENST00000440014 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
PDE4A-204ENST00000440014 DAPK1P53355 1430 aa17.71■□□□□ 0.43
PDE4A-204ENST00000440014 USP47Q96K76 1375 aa17.7■□□□□ 0.42
PDE4A-204ENST00000440014 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms