RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
HCG20-208ENST00000439406 CUL7Q14999 1698 aa12.4□□□□□ -0.42
HCG20-208ENST00000439406 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
HCG20-208ENST00000439406 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
HCG20-208ENST00000439406 RGL2O15211 777 aa12.39□□□□□ -0.43
HCG20-208ENST00000439406 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
HCG20-208ENST00000439406 CARMIL1Q5VZK9 1371 aa12.39□□□□□ -0.43
HCG20-208ENST00000439406 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
HCG20-208ENST00000439406 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
HCG20-208ENST00000439406 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
HCG20-208ENST00000439406 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
HCG20-208ENST00000439406 IQGAP2Q13576 1575 aa12.31□□□□□ -0.44
HCG20-208ENST00000439406 DISP1Q96F81 1524 aa12.31□□□□□ -0.44
HCG20-208ENST00000439406 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
HCG20-208ENST00000439406 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
HCG20-208ENST00000439406 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
HCG20-208ENST00000439406 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
HCG20-208ENST00000439406 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.45
HCG20-208ENST00000439406 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
HCG20-208ENST00000439406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
HCG20-208ENST00000439406 PTPRMP28827 1452 aa12.25□□□□□ -0.45
HCG20-208ENST00000439406 ARAP3Q8WWN8 1544 aa12.25□□□□□ -0.45
HCG20-208ENST00000439406 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
HCG20-208ENST00000439406 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
HCG20-208ENST00000439406 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
HCG20-208ENST00000439406 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
HCG20-208ENST00000439406 ADAMTSL3P82987 1691 aa12.2□□□□□ -0.46
HCG20-208ENST00000439406 KIF21BO75037 1637 aa12.2□□□□□ -0.46
HCG20-208ENST00000439406 SOCS7O14512 581 aa12.2□□□□□ -0.46
HCG20-208ENST00000439406 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
HCG20-208ENST00000439406 RAPGEF2Q9Y4G8 1499 aa12.2□□□□□ -0.46
HCG20-208ENST00000439406 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
HCG20-208ENST00000439406 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
HCG20-208ENST00000439406 GOLGA3Q08378 1498 aa12.17□□□□□ -0.46
HCG20-208ENST00000439406 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
HCG20-208ENST00000439406 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
HCG20-208ENST00000439406 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
HCG20-208ENST00000439406 ABCA8O94911 1581 aa12.14□□□□□ -0.47
HCG20-208ENST00000439406 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
HCG20-208ENST00000439406 ILDR2Q71H61 639 aa12.12□□□□□ -0.47
HCG20-208ENST00000439406 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
HCG20-208ENST00000439406 NEO1Q92859 1461 aa12.12□□□□□ -0.47
HCG20-208ENST00000439406 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
HCG20-208ENST00000439406 HSPA2P54652 639 aa12.11□□□□□ -0.47
HCG20-208ENST00000439406 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
HCG20-208ENST00000439406 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
HCG20-208ENST00000439406 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
HCG20-208ENST00000439406 ATP10BO94823 1461 aa12.09□□□□□ -0.47
HCG20-208ENST00000439406 APLP2Q06481 763 aa12.08□□□□□ -0.48
HCG20-208ENST00000439406 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
HCG20-208ENST00000439406 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
HCG20-208ENST00000439406 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
HCG20-208ENST00000439406 POGZQ7Z3K3 1410 aa12.07□□□□□ -0.48
HCG20-208ENST00000439406 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
HCG20-208ENST00000439406 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
HCG20-208ENST00000439406 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
HCG20-208ENST00000439406 ARID3CA6NKF2 412 aa12.03□□□□□ -0.48
HCG20-208ENST00000439406 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
HCG20-208ENST00000439406 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
HCG20-208ENST00000439406 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
HCG20-208ENST00000439406 FHOD3Q2V2M9 1422 aa12.01□□□□□ -0.49
HCG20-208ENST00000439406 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
HCG20-208ENST00000439406 FANCAO15360 1455 aa12.01□□□□□ -0.49
HCG20-208ENST00000439406 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
HCG20-208ENST00000439406 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
HCG20-208ENST00000439406 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
HCG20-208ENST00000439406 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
HCG20-208ENST00000439406 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
HCG20-208ENST00000439406 FRMPD1Q5SYB0 1578 aa11.99□□□□□ -0.49
HCG20-208ENST00000439406 MAGI2Q86UL8 1455 aa11.98□□□□□ -0.49
HCG20-208ENST00000439406 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.49
HCG20-208ENST00000439406 MLECQ14165 292 aa11.96□□□□□ -0.49
HCG20-208ENST00000439406 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
HCG20-208ENST00000439406 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
HCG20-208ENST00000439406 HRCP23327 699 aa11.95□□□□□ -0.5
HCG20-208ENST00000439406 SETD1BQ9UPS6 1966 aaKnown RBP11.95□□□□□ -0.5
HCG20-208ENST00000439406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
HCG20-208ENST00000439406 RICTORQ6R327 1708 aa11.94□□□□□ -0.5
HCG20-208ENST00000439406 EFCAB5A4FU69 1503 aa11.93□□□□□ -0.5
HCG20-208ENST00000439406 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
HCG20-208ENST00000439406 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
HCG20-208ENST00000439406 PTPRTO14522 1441 aa11.92□□□□□ -0.5
HCG20-208ENST00000439406 TTC37Q6PGP7 1564 aa11.92□□□□□ -0.5
HCG20-208ENST00000439406 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
HCG20-208ENST00000439406 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
HCG20-208ENST00000439406 CFAP74Q9C0B2 1584 aa11.91□□□□□ -0.5
HCG20-208ENST00000439406 ATP10AO60312 1499 aa11.9□□□□□ -0.5
HCG20-208ENST00000439406 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
HCG20-208ENST00000439406 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
HCG20-208ENST00000439406 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
HCG20-208ENST00000439406 MIER1Q8N108 512 aa11.89□□□□□ -0.51
HCG20-208ENST00000439406 PREX1Q8TCU6 1659 aa11.89□□□□□ -0.51
HCG20-208ENST00000439406 FER1L4A9Z1Z3 1794 aa11.89□□□□□ -0.51
HCG20-208ENST00000439406 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
HCG20-208ENST00000439406 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
HCG20-208ENST00000439406 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
HCG20-208ENST00000439406 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
HCG20-208ENST00000439406 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
HCG20-208ENST00000439406 MYT1Q01538 1121 aa11.88□□□□□ -0.51
HCG20-208ENST00000439406 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms