RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
SHPRH-206ENST00000438092 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
SHPRH-206ENST00000438092 PDE4CQ08493 712 aa13.22□□□□□ -0.29
SHPRH-206ENST00000438092 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-206ENST00000438092 ANP32EQ9BTT0 268 aa13.21□□□□□ -0.29
SHPRH-206ENST00000438092 DRC7Q8IY82 874 aa13.21□□□□□ -0.3
SHPRH-206ENST00000438092 GOLGA6L6A8MZA4 724 aa13.19□□□□□ -0.3
SHPRH-206ENST00000438092 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-206ENST00000438092 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
SHPRH-206ENST00000438092 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
SHPRH-206ENST00000438092 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHPRH-206ENST00000438092 G3V3G9 751 aa13.17□□□□□ -0.3
SHPRH-206ENST00000438092 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
SHPRH-206ENST00000438092 PKD2Q13563 968 aa13.16□□□□□ -0.3
SHPRH-206ENST00000438092 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-206ENST00000438092 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
SHPRH-206ENST00000438092 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
SHPRH-206ENST00000438092 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
SHPRH-206ENST00000438092 MCCP23508 829 aa13.15□□□□□ -0.3
SHPRH-206ENST00000438092 PRM3Q9NNZ6 103 aa13.15□□□□□ -0.3
SHPRH-206ENST00000438092 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
SHPRH-206ENST00000438092 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
SHPRH-206ENST00000438092 MS4A1P11836 297 aa13.15□□□□□ -0.3
SHPRH-206ENST00000438092 CUX2O14529 1486 aa13.14□□□□□ -0.31
SHPRH-206ENST00000438092 SLC4A10Q6U841 1118 aa13.13□□□□□ -0.31
SHPRH-206ENST00000438092 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
SHPRH-206ENST00000438092 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.315e-7■■□□□ 12
SHPRH-206ENST00000438092 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
SHPRH-206ENST00000438092 ARID3AQ99856 593 aa13.13□□□□□ -0.31
SHPRH-206ENST00000438092 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
SHPRH-206ENST00000438092 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
SHPRH-206ENST00000438092 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
SHPRH-206ENST00000438092 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
SHPRH-206ENST00000438092 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
SHPRH-206ENST00000438092 MSH5O43196 834 aa13.11□□□□□ -0.31
SHPRH-206ENST00000438092 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
SHPRH-206ENST00000438092 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
SHPRH-206ENST00000438092 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
SHPRH-206ENST00000438092 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-206ENST00000438092 ROCK2O75116 1388 aaKnown RBP13.1□□□□□ -0.31
SHPRH-206ENST00000438092 EEA1Q15075 1411 aa13.1□□□□□ -0.31
SHPRH-206ENST00000438092 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
SHPRH-206ENST00000438092 CARMIL1Q5VZK9 1371 aa13.1□□□□□ -0.31
SHPRH-206ENST00000438092 KIF3BO15066 747 aa13.09□□□□□ -0.31
SHPRH-206ENST00000438092 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■■■■ 31.6
SHPRH-206ENST00000438092 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
SHPRH-206ENST00000438092 NRDCO43847 1150 aa13.08□□□□□ -0.31
SHPRH-206ENST00000438092 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.31
SHPRH-206ENST00000438092 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-206ENST00000438092 VPS53Q5VIR6 699 aa13.08□□□□□ -0.32
SHPRH-206ENST00000438092 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
SHPRH-206ENST00000438092 AMPHP49418 695 aa13.06□□□□□ -0.32
SHPRH-206ENST00000438092 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
SHPRH-206ENST00000438092 NGEFQ8N5V2 710 aa13.06□□□□□ -0.32
SHPRH-206ENST00000438092 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-206ENST00000438092 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
SHPRH-206ENST00000438092 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
SHPRH-206ENST00000438092 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
SHPRH-206ENST00000438092 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
SHPRH-206ENST00000438092 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
SHPRH-206ENST00000438092 NUP155O75694 1391 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 SOGA1O94964 1423 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 NOC3LQ8WTT2 800 aaKnown RBP13.03□□□□□ -0.32
SHPRH-206ENST00000438092 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-206ENST00000438092 TRAK1Q9UPV9 953 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
SHPRH-206ENST00000438092 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.32
SHPRH-206ENST00000438092 FHAD1B1AJZ9 1412 aa13.02□□□□□ -0.32
SHPRH-206ENST00000438092 EVA1CP58658 441 aa13.02□□□□□ -0.32
SHPRH-206ENST00000438092 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.32
SHPRH-206ENST00000438092 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.32
SHPRH-206ENST00000438092 KIAA2012Q0VF49 1180 aa13.02□□□□□ -0.33
SHPRH-206ENST00000438092 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
SHPRH-206ENST00000438092 ARHGAP35Q9NRY4 1499 aa13.02□□□□□ -0.33
SHPRH-206ENST00000438092 RAD21O60216 631 aa13.02□□□□□ -0.33
SHPRH-206ENST00000438092 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
SHPRH-206ENST00000438092 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
SHPRH-206ENST00000438092 ELL2O00472 640 aaPredicted RBP13□□□□□ -0.33
SHPRH-206ENST00000438092 ABCC8Q09428 1581 aa13□□□□□ -0.33
SHPRH-206ENST00000438092 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
SHPRH-206ENST00000438092 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
SHPRH-206ENST00000438092 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
SHPRH-206ENST00000438092 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
SHPRH-206ENST00000438092 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
SHPRH-206ENST00000438092 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
SHPRH-206ENST00000438092 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
SHPRH-206ENST00000438092 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
SHPRH-206ENST00000438092 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
SHPRH-206ENST00000438092 CARMIL2Q6F5E8 1435 aa12.97□□□□□ -0.33
SHPRH-206ENST00000438092 MARCH6O60337 910 aa12.97□□□□□ -0.33
SHPRH-206ENST00000438092 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
SHPRH-206ENST00000438092 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-206ENST00000438092 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms