RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
PTCH2-202ENST00000438067 EFCAB2Q5VUJ9 269 aa28.66■■■□□ 2.18
PTCH2-202ENST00000438067 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
PTCH2-202ENST00000438067 MLECQ14165 292 aa28.64■■■□□ 2.18
PTCH2-202ENST00000438067 PLPPR3Q6T4P5 718 aa28.64■■■□□ 2.18
PTCH2-202ENST00000438067 RIMS1Q86UR5 1692 aaKnown RBP28.64■■■□□ 2.17
PTCH2-202ENST00000438067 HECW1Q76N89 1606 aa28.63■■■□□ 2.17
PTCH2-202ENST00000438067 HSPA2P54652 639 aa28.59■■■□□ 2.17
PTCH2-202ENST00000438067 SIGLEC1Q9BZZ2 1709 aa28.58■■■□□ 2.17
PTCH2-202ENST00000438067 ATP10AO60312 1499 aa28.55■■■□□ 2.16
PTCH2-202ENST00000438067 TROQ12816 1431 aaPredicted RBP28.54■■■□□ 2.16
PTCH2-202ENST00000438067 AFAP1Q8N556 730 aa28.51■■■□□ 2.15
PTCH2-202ENST00000438067 KIF14Q15058 1648 aa28.51■■■□□ 2.15
PTCH2-202ENST00000438067 C9orf84Q5VXU9 1444 aa28.5■■■□□ 2.15
PTCH2-202ENST00000438067 CLIP1P30622 1438 aa28.49■■■□□ 2.15
PTCH2-202ENST00000438067 MYO5CQ9NQX4 1742 aa28.49■■■□□ 2.15
PTCH2-202ENST00000438067 ZNF518AQ6AHZ1 1483 aa28.46■■■□□ 2.15
PTCH2-202ENST00000438067 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
PTCH2-202ENST00000438067 ARHGEF12Q9NZN5 1544 aa28.45■■■□□ 2.15
PTCH2-202ENST00000438067 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
PTCH2-202ENST00000438067 MYT1LQ9UL68 1186 aa28.42■■■□□ 2.14
PTCH2-202ENST00000438067 FER1L4A9Z1Z3 1794 aa28.41■■■□□ 2.14
PTCH2-202ENST00000438067 KDM5CP41229 1560 aa28.38■■■□□ 2.13
PTCH2-202ENST00000438067 CASKIN1Q8WXD9 1431 aa28.37■■■□□ 2.13
PTCH2-202ENST00000438067 LRRIQ1Q96JM4 1722 aa28.35■■■□□ 2.13
PTCH2-202ENST00000438067 CERKQ8TCT0 537 aa28.33■■■□□ 2.13
PTCH2-202ENST00000438067 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
PTCH2-202ENST00000438067 TRAPPC8Q9Y2L5 1435 aa28.32■■■□□ 2.12
PTCH2-202ENST00000438067 CCDC18Q5T9S5 1454 aa28.32■■■□□ 2.12
PTCH2-202ENST00000438067 DIP2CQ9Y2E4 1556 aa28.3■■■□□ 2.12
PTCH2-202ENST00000438067 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
PTCH2-202ENST00000438067 REREQ9P2R6 1566 aa28.27■■■□□ 2.12
PTCH2-202ENST00000438067 ABCC1P33527 1531 aa28.25■■■□□ 2.11
PTCH2-202ENST00000438067 PREX2Q70Z35 1606 aa28.25■■■□□ 2.11
PTCH2-202ENST00000438067 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
PTCH2-202ENST00000438067 ABCA6Q8N139 1617 aa28.23■■■□□ 2.11
PTCH2-202ENST00000438067 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
PTCH2-202ENST00000438067 ESF1Q9H501 851 aaKnown RBP28.22■■■□□ 2.11
PTCH2-202ENST00000438067 DMRT2Q9Y5R5 561 aa28.22■■■□□ 2.11
PTCH2-202ENST00000438067 AGLP35573 1532 aa28.22■■■□□ 2.11
PTCH2-202ENST00000438067 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
PTCH2-202ENST00000438067 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
PTCH2-202ENST00000438067 ITSN2Q9NZM3 1697 aa28.16■■■□□ 2.1
PTCH2-202ENST00000438067 SETD1BQ9UPS6 1966 aaKnown RBP28.15■■■□□ 2.1
PTCH2-202ENST00000438067 HNRNPMP52272 730 aaKnown RBP eCLIP28.14■■■□□ 2.1
PTCH2-202ENST00000438067 GPATCH8Q9UKJ3 1502 aaKnown RBP28.13■■■□□ 2.09
PTCH2-202ENST00000438067 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
PTCH2-202ENST00000438067 KIDINS220Q9ULH0 1771 aa28.13■■■□□ 2.09
PTCH2-202ENST00000438067 SPAG9O60271 1321 aaKnown RBP28.12■■■□□ 2.09
PTCH2-202ENST00000438067 STRCQ7RTU9 1775 aa28.11■■■□□ 2.09
PTCH2-202ENST00000438067 SAMD9LQ8IVG5 1584 aa28.1■■■□□ 2.09
PTCH2-202ENST00000438067 C3P01024 1663 aa28.1■■■□□ 2.09
PTCH2-202ENST00000438067 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
PTCH2-202ENST00000438067 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
PTCH2-202ENST00000438067 SYCP2Q9BX26 1530 aa28.06■■■□□ 2.08
PTCH2-202ENST00000438067 PTPRTO14522 1441 aa28.05■■■□□ 2.08
PTCH2-202ENST00000438067 KIAA1107Q9UPP5 1409 aa28.05■■■□□ 2.08
PTCH2-202ENST00000438067 CCNB3Q8WWL7 1395 aa28.03■■■□□ 2.08
PTCH2-202ENST00000438067 ZMYM3Q14202 1370 aa28.02■■■□□ 2.08
PTCH2-202ENST00000438067 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.07
PTCH2-202ENST00000438067 MTUS2Q5JR59 1369 aa28■■■□□ 2.07
PTCH2-202ENST00000438067 NPATQ14207 1427 aa27.99■■■□□ 2.07
PTCH2-202ENST00000438067 ATP7AQ04656 1500 aa27.97■■■□□ 2.07
PTCH2-202ENST00000438067 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
PTCH2-202ENST00000438067 A2MP01023 1474 aa27.95■■■□□ 2.07
PTCH2-202ENST00000438067 ZNF644Q9H582 1327 aaPredicted RBP27.94■■■□□ 2.06
PTCH2-202ENST00000438067 GGT6Q6P531 493 aa27.93■■■□□ 2.06
PTCH2-202ENST00000438067 SUPT6HQ7KZ85 1726 aaKnown RBP27.91■■■□□ 2.06
PTCH2-202ENST00000438067 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
PTCH2-202ENST00000438067 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
PTCH2-202ENST00000438067 PLXNC1O60486 1568 aa27.9■■■□□ 2.06
PTCH2-202ENST00000438067 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
PTCH2-202ENST00000438067 LTBP4Q8N2S1 1624 aa27.88■■■□□ 2.05
PTCH2-202ENST00000438067 CAMSAP1Q5T5Y3 1602 aa27.87■■■□□ 2.05
PTCH2-202ENST00000438067 NCKAP5LQ9HCH0 1330 aa27.87■■■□□ 2.05
PTCH2-202ENST00000438067 MBD5Q9P267 1494 aa27.86■■■□□ 2.05
PTCH2-202ENST00000438067 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
PTCH2-202ENST00000438067 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
PTCH2-202ENST00000438067 CLTCQ00610 1675 aaKnown RBP27.82■■■□□ 2.04
PTCH2-202ENST00000438067 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
PTCH2-202ENST00000438067 EHBP1L1Q8N3D4 1523 aa27.81■■■□□ 2.04
PTCH2-202ENST00000438067 RTEL1-TNFRSF6BF6WH68 1400 aa27.8■■■□□ 2.04
PTCH2-202ENST00000438067 DHX29Q7Z478 1369 aaKnown RBP27.79■■■□□ 2.04
PTCH2-202ENST00000438067 PKD2Q13563 968 aa27.79■■■□□ 2.04
PTCH2-202ENST00000438067 DISP3Q9P2K9 1392 aa27.78■■■□□ 2.04
PTCH2-202ENST00000438067 IQSEC2Q5JU85 1478 aa27.77■■■□□ 2.04
PTCH2-202ENST00000438067 ZNF335Q9H4Z2 1342 aaPredicted RBP27.76■■■□□ 2.03
PTCH2-202ENST00000438067 PLA2R1Q13018 1463 aa27.76■■■□□ 2.03
PTCH2-202ENST00000438067 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
PTCH2-202ENST00000438067 KIF3BO15066 747 aa27.73■■■□□ 2.03
PTCH2-202ENST00000438067 MYO3AQ8NEV4 1616 aa27.73■■■□□ 2.03
PTCH2-202ENST00000438067 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
PTCH2-202ENST00000438067 TCOF1Q13428 1488 aaKnown RBP27.72■■■□□ 2.03
PTCH2-202ENST00000438067 RSPH4AQ5TD94 716 aa27.72■■■□□ 2.03
PTCH2-202ENST00000438067 ILDR2Q71H61 639 aa27.72■■■□□ 2.03
PTCH2-202ENST00000438067 ZNF142P52746 1687 aaPredicted RBP27.7■■■□□ 2.02
PTCH2-202ENST00000438067 NCOA2Q15596 1464 aa27.7■■■□□ 2.02
PTCH2-202ENST00000438067 FBXO31Q5XUX0 539 aaPredicted RBP27.68■■■□□ 2.02
PTCH2-202ENST00000438067 CCDC141Q6ZP82 1450 aa27.68■■■□□ 2.02
PTCH2-202ENST00000438067 A2ML1A8K2U0 1454 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms