RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
ARHGEF28-204ENST00000437974 NOP58Q9Y2X3 529 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-204ENST00000437974 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
ARHGEF28-204ENST00000437974 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
ARHGEF28-204ENST00000437974 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
ARHGEF28-204ENST00000437974 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
ARHGEF28-204ENST00000437974 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
ARHGEF28-204ENST00000437974 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
ARHGEF28-204ENST00000437974 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
ARHGEF28-204ENST00000437974 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
ARHGEF28-204ENST00000437974 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
ARHGEF28-204ENST00000437974 DNTTIP2Q5QJE6 756 aaKnown RBP23.31■■□□□ 1.32
ARHGEF28-204ENST00000437974 ISY1Q9ULR0 285 aaKnown RBP23.31■■□□□ 1.32
ARHGEF28-204ENST00000437974 PLCB2Q00722 1185 aa23.3■■□□□ 1.32
ARHGEF28-204ENST00000437974 MCCP23508 829 aa23.3■■□□□ 1.32
ARHGEF28-204ENST00000437974 GOLGA6L6A8MZA4 724 aa23.3■■□□□ 1.32
ARHGEF28-204ENST00000437974 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
ARHGEF28-204ENST00000437974 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
ARHGEF28-204ENST00000437974 FOXD1Q16676 465 aa23.28■■□□□ 1.32
ARHGEF28-204ENST00000437974 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
ARHGEF28-204ENST00000437974 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
ARHGEF28-204ENST00000437974 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
ARHGEF28-204ENST00000437974 GOLGA6L4A6NEF3 574 aa23.27■■□□□ 1.32
ARHGEF28-204ENST00000437974 CALD1Q05682 793 aaKnown RBP23.27■■□□□ 1.32
ARHGEF28-204ENST00000437974 KTN1Q86UP2 1357 aaKnown RBP23.26■■□□□ 1.31
ARHGEF28-204ENST00000437974 KIF3BO15066 747 aa23.25■■□□□ 1.31
ARHGEF28-204ENST00000437974 IPO8O15397 1037 aaKnown RBP23.25■■□□□ 1.31
ARHGEF28-204ENST00000437974 NUP155O75694 1391 aa23.25■■□□□ 1.31
ARHGEF28-204ENST00000437974 ANKRD30AQ9BXX3 1397 aa23.25■■□□□ 1.31
ARHGEF28-204ENST00000437974 TMX4Q9H1E5 349 aaPredicted RBP23.25■■□□□ 1.31
ARHGEF28-204ENST00000437974 CFAP44Q96MT7 982 aa23.24■■□□□ 1.31
ARHGEF28-204ENST00000437974 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF28-204ENST00000437974 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.317e-6■■■□□ 19.2
ARHGEF28-204ENST00000437974 RTN4Q9NQC3 1192 aaKnown RBP23.23■■□□□ 1.31
ARHGEF28-204ENST00000437974 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
ARHGEF28-204ENST00000437974 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
ARHGEF28-204ENST00000437974 CHMP4AQ9BY43 222 aa23.22■■□□□ 1.31
ARHGEF28-204ENST00000437974 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
ARHGEF28-204ENST00000437974 NRDCO43847 1150 aa23.21■■□□□ 1.31
ARHGEF28-204ENST00000437974 HSCBQ8IWL3 235 aa23.21■■□□□ 1.31
ARHGEF28-204ENST00000437974 RAB3GAP2Q9H2M9 1393 aa23.21■■□□□ 1.31
ARHGEF28-204ENST00000437974 CLSTN1O94985 981 aa23.2■■□□□ 1.3
ARHGEF28-204ENST00000437974 EIF3AQ14152 1382 aaKnown RBP23.19■■□□□ 1.3
ARHGEF28-204ENST00000437974 MPHOSPH9Q99550 1183 aa23.17■■□□□ 1.3
ARHGEF28-204ENST00000437974 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
ARHGEF28-204ENST00000437974 APBB1O00213 710 aa23.17■■□□□ 1.3
ARHGEF28-204ENST00000437974 WASHC2CQ9Y4E1 1318 aa23.17■■□□□ 1.3
ARHGEF28-204ENST00000437974 ERICH6BQ5W0A0 696 aa23.16■■□□□ 1.3
ARHGEF28-204ENST00000437974 KIAA1211Q6ZU35 1233 aa23.16■■□□□ 1.3
ARHGEF28-204ENST00000437974 TERF2IPQ9NYB0 399 aa23.16■■□□□ 1.3
ARHGEF28-204ENST00000437974 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
ARHGEF28-204ENST00000437974 NGDNQ8NEJ9 315 aaKnown RBP23.15■■□□□ 1.3
ARHGEF28-204ENST00000437974 GNL2Q13823 731 aaKnown RBP23.15■■□□□ 1.3
ARHGEF28-204ENST00000437974 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.299e-7■■■□□ 17.7
ARHGEF28-204ENST00000437974 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
ARHGEF28-204ENST00000437974 NAP1L5Q96NT1 182 aaPredicted RBP23.12■■□□□ 1.29
ARHGEF28-204ENST00000437974 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
ARHGEF28-204ENST00000437974 RALBP1Q15311 655 aa23.1■■□□□ 1.29
ARHGEF28-204ENST00000437974 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
ARHGEF28-204ENST00000437974 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
ARHGEF28-204ENST00000437974 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
ARHGEF28-204ENST00000437974 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
ARHGEF28-204ENST00000437974 TAF7LQ5H9L4 462 aa23.08■■□□□ 1.28
ARHGEF28-204ENST00000437974 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
ARHGEF28-204ENST00000437974 CHMP3Q9Y3E7 222 aa23.07■■□□□ 1.28
ARHGEF28-204ENST00000437974 AMPHP49418 695 aa23.06■■□□□ 1.28
ARHGEF28-204ENST00000437974 WIZO95785 1651 aa23.04■■□□□ 1.28
ARHGEF28-204ENST00000437974 RCAN3Q9UKA8 241 aa23.04■■□□□ 1.28
ARHGEF28-204ENST00000437974 G3V3G9 751 aa23.03■■□□□ 1.28
ARHGEF28-204ENST00000437974 DCAF8Q5TAQ9 597 aa23.03■■□□□ 1.28
ARHGEF28-204ENST00000437974 RWDD1Q9H446 243 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF28-204ENST00000437974 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
ARHGEF28-204ENST00000437974 DEKP35659 375 aaKnown RBP23.02■■□□□ 1.28
ARHGEF28-204ENST00000437974 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
ARHGEF28-204ENST00000437974 GPATCH3Q96I76 525 aa23■■□□□ 1.27
ARHGEF28-204ENST00000437974 LTV1Q96GA3 475 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF28-204ENST00000437974 CCDC18Q5T9S5 1454 aa22.99■■□□□ 1.27
ARHGEF28-204ENST00000437974 NUTM2FA1L443 756 aa22.99■■□□□ 1.27
ARHGEF28-204ENST00000437974 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
ARHGEF28-204ENST00000437974 LMOD3Q0VAK6 560 aa22.98■■□□□ 1.27
ARHGEF28-204ENST00000437974 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
ARHGEF28-204ENST00000437974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.276e-7■■■□□ 17.7
ARHGEF28-204ENST00000437974 DRC7Q8IY82 874 aa22.96■■□□□ 1.27
ARHGEF28-204ENST00000437974 HMMRO75330 724 aa22.96■■□□□ 1.27
ARHGEF28-204ENST00000437974 GTF2E1P29083 439 aaPredicted RBP22.96■■□□□ 1.27
ARHGEF28-204ENST00000437974 SMC4Q9NTJ3 1288 aa22.96■■□□□ 1.27
ARHGEF28-204ENST00000437974 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
ARHGEF28-204ENST00000437974 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
ARHGEF28-204ENST00000437974 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
ARHGEF28-204ENST00000437974 SLC4A10Q6U841 1118 aa22.93■■□□□ 1.26
ARHGEF28-204ENST00000437974 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
ARHGEF28-204ENST00000437974 L1TD1Q5T7N2 865 aaKnown RBP22.92■■□□□ 1.26
ARHGEF28-204ENST00000437974 CHAF1AQ13111 956 aaPredicted RBP22.92■■□□□ 1.26
ARHGEF28-204ENST00000437974 HTATSF1O43719 755 aaKnown RBP22.92■■□□□ 1.26
ARHGEF28-204ENST00000437974 PMFBP1Q8TBY8 1022 aa22.91■■□□□ 1.26
ARHGEF28-204ENST00000437974 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.26
ARHGEF28-204ENST00000437974 TSHZ2Q9NRE2 1034 aa22.89■■□□□ 1.26
ARHGEF28-204ENST00000437974 TRIM6-TRIM34B2RNG4 842 aa22.89■■□□□ 1.25
ARHGEF28-204ENST00000437974 TCERG1O14776 1098 aaKnown RBP22.89■■□□□ 1.25
ARHGEF28-204ENST00000437974 FRAT2O75474 233 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms