RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 WDR62O43379 1518 aa17.07■□□□□ 0.32
TMEM116-202ENST00000437003 MIA2Q96PC5 1412 aa17.06■□□□□ 0.32
TMEM116-202ENST00000437003 NBR1Q14596 966 aa17.04■□□□□ 0.32
TMEM116-202ENST00000437003 FOXD1Q16676 465 aa17.04■□□□□ 0.32
TMEM116-202ENST00000437003 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
TMEM116-202ENST00000437003 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
TMEM116-202ENST00000437003 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.32
TMEM116-202ENST00000437003 AKNAQ7Z591 1439 aa17.02■□□□□ 0.31
TMEM116-202ENST00000437003 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
TMEM116-202ENST00000437003 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
TMEM116-202ENST00000437003 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
TMEM116-202ENST00000437003 KIAA0556O60303 1618 aa17■□□□□ 0.31
TMEM116-202ENST00000437003 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
TMEM116-202ENST00000437003 KDM6BO15054 1643 aa16.99■□□□□ 0.31
TMEM116-202ENST00000437003 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
TMEM116-202ENST00000437003 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
TMEM116-202ENST00000437003 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
TMEM116-202ENST00000437003 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
TMEM116-202ENST00000437003 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
TMEM116-202ENST00000437003 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
TMEM116-202ENST00000437003 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
TMEM116-202ENST00000437003 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
TMEM116-202ENST00000437003 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
TMEM116-202ENST00000437003 ARXQ96QS3 562 aa16.95■□□□□ 0.3
TMEM116-202ENST00000437003 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
TMEM116-202ENST00000437003 DAPK1P53355 1430 aa16.95■□□□□ 0.3
TMEM116-202ENST00000437003 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
TMEM116-202ENST00000437003 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
TMEM116-202ENST00000437003 FBLN2P98095 1184 aa16.94■□□□□ 0.3
TMEM116-202ENST00000437003 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
TMEM116-202ENST00000437003 NOP58Q9Y2X3 529 aaKnown RBP16.94■□□□□ 0.3
TMEM116-202ENST00000437003 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM116-202ENST00000437003 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
TMEM116-202ENST00000437003 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
TMEM116-202ENST00000437003 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
TMEM116-202ENST00000437003 ROCK1Q13464 1354 aa16.92■□□□□ 0.3
TMEM116-202ENST00000437003 ABCC5O15440 1437 aa16.92■□□□□ 0.3
TMEM116-202ENST00000437003 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
TMEM116-202ENST00000437003 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
TMEM116-202ENST00000437003 PRG4Q92954 1404 aaPredicted RBP16.89■□□□□ 0.29
TMEM116-202ENST00000437003 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
TMEM116-202ENST00000437003 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
TMEM116-202ENST00000437003 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
TMEM116-202ENST00000437003 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
TMEM116-202ENST00000437003 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
TMEM116-202ENST00000437003 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
TMEM116-202ENST00000437003 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
TMEM116-202ENST00000437003 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
TMEM116-202ENST00000437003 ANKRD30BQ9BXX2 1392 aa16.85■□□□□ 0.29
TMEM116-202ENST00000437003 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
TMEM116-202ENST00000437003 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
TMEM116-202ENST00000437003 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
TMEM116-202ENST00000437003 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
TMEM116-202ENST00000437003 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
TMEM116-202ENST00000437003 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
TMEM116-202ENST00000437003 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
TMEM116-202ENST00000437003 MRS2Q9HD23 443 aa16.83■□□□□ 0.28
TMEM116-202ENST00000437003 RPRD2Q5VT52 1461 aaKnown RBP16.82■□□□□ 0.28
TMEM116-202ENST00000437003 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
TMEM116-202ENST00000437003 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
TMEM116-202ENST00000437003 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
TMEM116-202ENST00000437003 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
TMEM116-202ENST00000437003 CNTLNQ9NXG0 1405 aa16.8■□□□□ 0.28
TMEM116-202ENST00000437003 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
TMEM116-202ENST00000437003 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
TMEM116-202ENST00000437003 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
TMEM116-202ENST00000437003 KIF14Q15058 1648 aa16.78■□□□□ 0.28
TMEM116-202ENST00000437003 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
TMEM116-202ENST00000437003 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
TMEM116-202ENST00000437003 NUP160Q12769 1436 aa16.77■□□□□ 0.28
TMEM116-202ENST00000437003 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.28
TMEM116-202ENST00000437003 PLEKHD1A6NEE1 506 aa16.77■□□□□ 0.27
TMEM116-202ENST00000437003 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
TMEM116-202ENST00000437003 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.27
TMEM116-202ENST00000437003 UBE2Q2Q8WVN8 375 aa16.76■□□□□ 0.27
TMEM116-202ENST00000437003 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
TMEM116-202ENST00000437003 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
TMEM116-202ENST00000437003 PZPP20742 1482 aa16.74■□□□□ 0.27
TMEM116-202ENST00000437003 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
TMEM116-202ENST00000437003 ANKRD30AQ9BXX3 1397 aa16.73■□□□□ 0.27
TMEM116-202ENST00000437003 KIF7Q2M1P5 1343 aa16.73■□□□□ 0.27
TMEM116-202ENST00000437003 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
TMEM116-202ENST00000437003 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
TMEM116-202ENST00000437003 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
TMEM116-202ENST00000437003 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
TMEM116-202ENST00000437003 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
TMEM116-202ENST00000437003 PKD2Q13563 968 aa16.71■□□□□ 0.27
TMEM116-202ENST00000437003 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
TMEM116-202ENST00000437003 ANKRD50Q9ULJ7 1429 aa16.69■□□□□ 0.26
TMEM116-202ENST00000437003 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
TMEM116-202ENST00000437003 ATP10BO94823 1461 aa16.69■□□□□ 0.26
TMEM116-202ENST00000437003 CROCC2H7BZ55 1655 aa16.68■□□□□ 0.26
TMEM116-202ENST00000437003 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
TMEM116-202ENST00000437003 ABCA8O94911 1581 aa16.67■□□□□ 0.26
TMEM116-202ENST00000437003 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
TMEM116-202ENST00000437003 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
TMEM116-202ENST00000437003 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
TMEM116-202ENST00000437003 CDC42BPAQ5VT25 1732 aa16.65■□□□□ 0.26
TMEM116-202ENST00000437003 NUP155O75694 1391 aa16.65■□□□□ 0.26
TMEM116-202ENST00000437003 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms