RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
LINC01516-201ENST00000436140 ABCA8O94911 1581 aa15.76■□□□□ 0.11
LINC01516-201ENST00000436140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01516-201ENST00000436140 MIA2Q96PC5 1412 aa15.73■□□□□ 0.11
LINC01516-201ENST00000436140 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
LINC01516-201ENST00000436140 DAPK1P53355 1430 aa15.73■□□□□ 0.11
LINC01516-201ENST00000436140 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
LINC01516-201ENST00000436140 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
LINC01516-201ENST00000436140 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
LINC01516-201ENST00000436140 MAPKBP1O60336 1514 aa15.69■□□□□ 0.1
LINC01516-201ENST00000436140 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
LINC01516-201ENST00000436140 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
LINC01516-201ENST00000436140 KDM6BO15054 1643 aa15.68■□□□□ 0.1
LINC01516-201ENST00000436140 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
LINC01516-201ENST00000436140 CLASP1Q7Z460 1538 aa15.67■□□□□ 0.1
LINC01516-201ENST00000436140 PKD2Q13563 968 aa15.66■□□□□ 0.1
LINC01516-201ENST00000436140 EFCAB2Q5VUJ9 269 aa15.66■□□□□ 0.1
LINC01516-201ENST00000436140 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
LINC01516-201ENST00000436140 MIER1Q8N108 512 aa15.64■□□□□ 0.09
LINC01516-201ENST00000436140 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
LINC01516-201ENST00000436140 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
LINC01516-201ENST00000436140 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
LINC01516-201ENST00000436140 ARHGAP5Q13017 1502 aa15.63■□□□□ 0.09
LINC01516-201ENST00000436140 NUP155O75694 1391 aa15.63■□□□□ 0.09
LINC01516-201ENST00000436140 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
LINC01516-201ENST00000436140 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
LINC01516-201ENST00000436140 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
LINC01516-201ENST00000436140 KDM2AQ9Y2K7 1162 aa15.62■□□□□ 0.09
LINC01516-201ENST00000436140 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
LINC01516-201ENST00000436140 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
LINC01516-201ENST00000436140 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
LINC01516-201ENST00000436140 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
LINC01516-201ENST00000436140 RGL3Q3MIN7 710 aa15.59■□□□□ 0.09
LINC01516-201ENST00000436140 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
LINC01516-201ENST00000436140 CNGB1Q14028 1251 aaPredicted RBP15.59■□□□□ 0.09
LINC01516-201ENST00000436140 ANKRD50Q9ULJ7 1429 aa15.58■□□□□ 0.09
LINC01516-201ENST00000436140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC01516-201ENST00000436140 ASXL2Q76L83 1435 aa15.56■□□□□ 0.08
LINC01516-201ENST00000436140 TTC37Q6PGP7 1564 aa15.56■□□□□ 0.08
LINC01516-201ENST00000436140 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
LINC01516-201ENST00000436140 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
LINC01516-201ENST00000436140 RAPGEF3O95398 923 aa15.54■□□□□ 0.08
LINC01516-201ENST00000436140 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
LINC01516-201ENST00000436140 ROCK1Q13464 1354 aa15.53■□□□□ 0.08
LINC01516-201ENST00000436140 TRAPPC8Q9Y2L5 1435 aa15.53■□□□□ 0.08
LINC01516-201ENST00000436140 SYCP2Q9BX26 1530 aa15.53■□□□□ 0.08
LINC01516-201ENST00000436140 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
LINC01516-201ENST00000436140 CDC42BPAQ5VT25 1732 aa15.52■□□□□ 0.08
LINC01516-201ENST00000436140 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
LINC01516-201ENST00000436140 ZCCHC11Q5TAX3 1644 aaKnown RBP15.52■□□□□ 0.08
LINC01516-201ENST00000436140 MBD5Q9P267 1494 aa15.52■□□□□ 0.07
LINC01516-201ENST00000436140 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
LINC01516-201ENST00000436140 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
LINC01516-201ENST00000436140 ARHGEF12Q9NZN5 1544 aa15.5■□□□□ 0.07
LINC01516-201ENST00000436140 PLCH2O75038 1416 aa15.5■□□□□ 0.07
LINC01516-201ENST00000436140 KIF3BO15066 747 aa15.5■□□□□ 0.07
LINC01516-201ENST00000436140 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
LINC01516-201ENST00000436140 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
LINC01516-201ENST00000436140 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
LINC01516-201ENST00000436140 RSPH4AQ5TD94 716 aa15.49■□□□□ 0.07
LINC01516-201ENST00000436140 SAMD9LQ8IVG5 1584 aa15.48■□□□□ 0.07
LINC01516-201ENST00000436140 WDR7Q9Y4E6 1490 aa15.48■□□□□ 0.07
LINC01516-201ENST00000436140 GGT6Q6P531 493 aa15.48■□□□□ 0.07
LINC01516-201ENST00000436140 CCDC141Q6ZP82 1450 aa15.47■□□□□ 0.07
LINC01516-201ENST00000436140 ITSN2Q9NZM3 1697 aa15.46■□□□□ 0.07
LINC01516-201ENST00000436140 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
LINC01516-201ENST00000436140 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.07
LINC01516-201ENST00000436140 ANKRD30BQ9BXX2 1392 aa15.46■□□□□ 0.07
LINC01516-201ENST00000436140 DCAF11Q8TEB1 546 aa15.46■□□□□ 0.07
LINC01516-201ENST00000436140 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.06
LINC01516-201ENST00000436140 FANCAO15360 1455 aa15.44■□□□□ 0.06
LINC01516-201ENST00000436140 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
LINC01516-201ENST00000436140 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
LINC01516-201ENST00000436140 TIMELESSQ9UNS1 1208 aa15.42■□□□□ 0.06
LINC01516-201ENST00000436140 PZPP20742 1482 aa15.42■□□□□ 0.06
LINC01516-201ENST00000436140 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
LINC01516-201ENST00000436140 ADGRL1O94910 1474 aa15.38■□□□□ 0.05
LINC01516-201ENST00000436140 PREX2Q70Z35 1606 aa15.38■□□□□ 0.05
LINC01516-201ENST00000436140 MLECQ14165 292 aa15.37■□□□□ 0.05
LINC01516-201ENST00000436140 GCC2Q8IWJ2 1684 aa15.37■□□□□ 0.05
LINC01516-201ENST00000436140 KIAA1107Q9UPP5 1409 aa15.37■□□□□ 0.05
LINC01516-201ENST00000436140 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
LINC01516-201ENST00000436140 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC01516-201ENST00000436140 C11orf95C9JLR9 678 aaPredicted RBP15.35■□□□□ 0.05
LINC01516-201ENST00000436140 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
LINC01516-201ENST00000436140 MYO5CQ9NQX4 1742 aa15.34■□□□□ 0.05
LINC01516-201ENST00000436140 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
LINC01516-201ENST00000436140 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
LINC01516-201ENST00000436140 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
LINC01516-201ENST00000436140 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
LINC01516-201ENST00000436140 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
LINC01516-201ENST00000436140 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
LINC01516-201ENST00000436140 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
LINC01516-201ENST00000436140 ABCC1P33527 1531 aa15.27■□□□□ 0.04
LINC01516-201ENST00000436140 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.03
LINC01516-201ENST00000436140 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.03
LINC01516-201ENST00000436140 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
LINC01516-201ENST00000436140 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
LINC01516-201ENST00000436140 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
LINC01516-201ENST00000436140 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms