RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 MAGI1Q96QZ7 1491 aaPredicted RBP12.79□□□□□ -0.36
CLNS1AP1-201ENST00000435954 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
CLNS1AP1-201ENST00000435954 PSEN1P49768 467 aa12.78□□□□□ -0.36
CLNS1AP1-201ENST00000435954 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
CLNS1AP1-201ENST00000435954 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
CLNS1AP1-201ENST00000435954 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
CLNS1AP1-201ENST00000435954 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
CLNS1AP1-201ENST00000435954 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
CLNS1AP1-201ENST00000435954 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
CLNS1AP1-201ENST00000435954 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
CLNS1AP1-201ENST00000435954 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
CLNS1AP1-201ENST00000435954 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
CLNS1AP1-201ENST00000435954 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
CLNS1AP1-201ENST00000435954 SOGA1O94964 1423 aa12.69□□□□□ -0.38
CLNS1AP1-201ENST00000435954 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
CLNS1AP1-201ENST00000435954 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
CLNS1AP1-201ENST00000435954 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
CLNS1AP1-201ENST00000435954 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
CLNS1AP1-201ENST00000435954 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
CLNS1AP1-201ENST00000435954 CLCN6P51797 869 aa12.65□□□□□ -0.38
CLNS1AP1-201ENST00000435954 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
CLNS1AP1-201ENST00000435954 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
CLNS1AP1-201ENST00000435954 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
CLNS1AP1-201ENST00000435954 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
CLNS1AP1-201ENST00000435954 ERCC6L2Q5T890 1561 aa12.61□□□□□ -0.39
CLNS1AP1-201ENST00000435954 TIE1P35590 1138 aa12.6□□□□□ -0.39
CLNS1AP1-201ENST00000435954 KDM6BO15054 1643 aa12.59□□□□□ -0.39
CLNS1AP1-201ENST00000435954 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
CLNS1AP1-201ENST00000435954 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
CLNS1AP1-201ENST00000435954 GABBR2O75899 941 aa12.57□□□□□ -0.4
CLNS1AP1-201ENST00000435954 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
CLNS1AP1-201ENST00000435954 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
CLNS1AP1-201ENST00000435954 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
CLNS1AP1-201ENST00000435954 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
CLNS1AP1-201ENST00000435954 FAM69CQ0P6D2 419 aa12.56□□□□□ -0.4
CLNS1AP1-201ENST00000435954 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
CLNS1AP1-201ENST00000435954 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
CLNS1AP1-201ENST00000435954 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
CLNS1AP1-201ENST00000435954 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
CLNS1AP1-201ENST00000435954 SOX12O15370 315 aa12.52□□□□□ -0.41
CLNS1AP1-201ENST00000435954 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
CLNS1AP1-201ENST00000435954 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
CLNS1AP1-201ENST00000435954 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
CLNS1AP1-201ENST00000435954 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
CLNS1AP1-201ENST00000435954 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
CLNS1AP1-201ENST00000435954 NUP160Q12769 1436 aa12.5□□□□□ -0.41
CLNS1AP1-201ENST00000435954 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
CLNS1AP1-201ENST00000435954 HECW2Q9P2P5 1572 aa12.5□□□□□ -0.41
CLNS1AP1-201ENST00000435954 SHROOM2Q13796 1616 aa12.5□□□□□ -0.41
CLNS1AP1-201ENST00000435954 NLRP6P59044 892 aa12.48□□□□□ -0.41
CLNS1AP1-201ENST00000435954 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
CLNS1AP1-201ENST00000435954 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
CLNS1AP1-201ENST00000435954 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
CLNS1AP1-201ENST00000435954 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
CLNS1AP1-201ENST00000435954 ADGRL1O94910 1474 aa12.46□□□□□ -0.41
CLNS1AP1-201ENST00000435954 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
CLNS1AP1-201ENST00000435954 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
CLNS1AP1-201ENST00000435954 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
CLNS1AP1-201ENST00000435954 ABCA5Q8WWZ7 1642 aa12.46□□□□□ -0.41
CLNS1AP1-201ENST00000435954 CUX1P39880 1505 aa12.44□□□□□ -0.42
CLNS1AP1-201ENST00000435954 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
CLNS1AP1-201ENST00000435954 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
CLNS1AP1-201ENST00000435954 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
CLNS1AP1-201ENST00000435954 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
CLNS1AP1-201ENST00000435954 PPP1R37O75864 691 aa12.41□□□□□ -0.42
CLNS1AP1-201ENST00000435954 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
CLNS1AP1-201ENST00000435954 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
CLNS1AP1-201ENST00000435954 TSPOAP1O95153 1857 aa12.4□□□□□ -0.42
CLNS1AP1-201ENST00000435954 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
CLNS1AP1-201ENST00000435954 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
CLNS1AP1-201ENST00000435954 FHAD1B1AJZ9 1412 aa12.38□□□□□ -0.43
CLNS1AP1-201ENST00000435954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLNS1AP1-201ENST00000435954 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
CLNS1AP1-201ENST00000435954 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
CLNS1AP1-201ENST00000435954 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
CLNS1AP1-201ENST00000435954 IER5LQ5T953 404 aa12.33□□□□□ -0.44
CLNS1AP1-201ENST00000435954 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
CLNS1AP1-201ENST00000435954 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
CLNS1AP1-201ENST00000435954 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
CLNS1AP1-201ENST00000435954 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
CLNS1AP1-201ENST00000435954 ERICH3Q5RHP9 1530 aa12.3□□□□□ -0.44
CLNS1AP1-201ENST00000435954 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
CLNS1AP1-201ENST00000435954 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
CLNS1AP1-201ENST00000435954 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
CLNS1AP1-201ENST00000435954 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
CLNS1AP1-201ENST00000435954 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.45
CLNS1AP1-201ENST00000435954 SOCS7O14512 581 aa12.26□□□□□ -0.45
CLNS1AP1-201ENST00000435954 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
CLNS1AP1-201ENST00000435954 GLI2P10070 1586 aa12.26□□□□□ -0.45
CLNS1AP1-201ENST00000435954 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
CLNS1AP1-201ENST00000435954 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
CLNS1AP1-201ENST00000435954 PLCG2P16885 1265 aa12.23□□□□□ -0.45
CLNS1AP1-201ENST00000435954 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
CLNS1AP1-201ENST00000435954 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
CLNS1AP1-201ENST00000435954 SEC24BO95487 1268 aa12.21□□□□□ -0.45
CLNS1AP1-201ENST00000435954 C7P10643 843 aa12.21□□□□□ -0.45
CLNS1AP1-201ENST00000435954 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
CLNS1AP1-201ENST00000435954 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
CLNS1AP1-201ENST00000435954 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
CLNS1AP1-201ENST00000435954 ASXL2Q76L83 1435 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms