RNA–Protein interactions for RNA: ENST00000435676.2

FAM78B-203, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 2

Gene FAM78B, Length 4,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-203ENST00000435676 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
FAM78B-203ENST00000435676 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
FAM78B-203ENST00000435676 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
FAM78B-203ENST00000435676 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
FAM78B-203ENST00000435676 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
FAM78B-203ENST00000435676 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
FAM78B-203ENST00000435676 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
FAM78B-203ENST00000435676 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
FAM78B-203ENST00000435676 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
FAM78B-203ENST00000435676 TMF1P82094 1093 aa12.39□□□□□ -0.43
FAM78B-203ENST00000435676 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
FAM78B-203ENST00000435676 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
FAM78B-203ENST00000435676 A0A0G2JS52 829 aa12.38□□□□□ -0.43
FAM78B-203ENST00000435676 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
FAM78B-203ENST00000435676 POGZQ7Z3K3 1410 aa12.37□□□□□ -0.43
FAM78B-203ENST00000435676 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
FAM78B-203ENST00000435676 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
FAM78B-203ENST00000435676 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
FAM78B-203ENST00000435676 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
FAM78B-203ENST00000435676 STK26Q9P289 416 aa12.35□□□□□ -0.43
FAM78B-203ENST00000435676 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
FAM78B-203ENST00000435676 KIF15Q9NS87 1388 aa12.34□□□□□ -0.43
FAM78B-203ENST00000435676 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
FAM78B-203ENST00000435676 FGD6Q6ZV73 1430 aa12.34□□□□□ -0.43
FAM78B-203ENST00000435676 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
FAM78B-203ENST00000435676 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.44
FAM78B-203ENST00000435676 LRRC9Q6ZRR7 1453 aa12.33□□□□□ -0.44
FAM78B-203ENST00000435676 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
FAM78B-203ENST00000435676 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
FAM78B-203ENST00000435676 AFAP1Q8N556 730 aa12.32□□□□□ -0.44
FAM78B-203ENST00000435676 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
FAM78B-203ENST00000435676 WDR62O43379 1518 aa12.32□□□□□ -0.44
FAM78B-203ENST00000435676 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
FAM78B-203ENST00000435676 ARAP1Q96P48 1450 aa12.3□□□□□ -0.44
FAM78B-203ENST00000435676 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
FAM78B-203ENST00000435676 EHBP1L1Q8N3D4 1523 aa12.3□□□□□ -0.44
FAM78B-203ENST00000435676 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
FAM78B-203ENST00000435676 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
FAM78B-203ENST00000435676 FOXD1Q16676 465 aa12.29□□□□□ -0.44
FAM78B-203ENST00000435676 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
FAM78B-203ENST00000435676 MIA2Q96PC5 1412 aa12.29□□□□□ -0.44
FAM78B-203ENST00000435676 PLB1Q6P1J6 1458 aa12.29□□□□□ -0.44
FAM78B-203ENST00000435676 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
FAM78B-203ENST00000435676 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
FAM78B-203ENST00000435676 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
FAM78B-203ENST00000435676 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
FAM78B-203ENST00000435676 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.44
FAM78B-203ENST00000435676 ANKRD50Q9ULJ7 1429 aa12.27□□□□□ -0.45
FAM78B-203ENST00000435676 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
FAM78B-203ENST00000435676 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
FAM78B-203ENST00000435676 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
FAM78B-203ENST00000435676 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
FAM78B-203ENST00000435676 RAPGEF3O95398 923 aa12.24□□□□□ -0.45
FAM78B-203ENST00000435676 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
FAM78B-203ENST00000435676 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
FAM78B-203ENST00000435676 HNRNPUQ00839 825 aaKnown RBP eCLIP12.23□□□□□ -0.45
FAM78B-203ENST00000435676 TERF2IPQ9NYB0 399 aa12.23□□□□□ -0.45
FAM78B-203ENST00000435676 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
FAM78B-203ENST00000435676 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
FAM78B-203ENST00000435676 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
FAM78B-203ENST00000435676 NGDNQ8NEJ9 315 aaKnown RBP12.22□□□□□ -0.45
FAM78B-203ENST00000435676 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
FAM78B-203ENST00000435676 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
FAM78B-203ENST00000435676 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
FAM78B-203ENST00000435676 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
FAM78B-203ENST00000435676 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
FAM78B-203ENST00000435676 MORC1Q86VD1 984 aa12.19□□□□□ -0.46
FAM78B-203ENST00000435676 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
FAM78B-203ENST00000435676 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
FAM78B-203ENST00000435676 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
FAM78B-203ENST00000435676 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
FAM78B-203ENST00000435676 DENND4BO75064 1496 aaPredicted RBP12.17□□□□□ -0.46
FAM78B-203ENST00000435676 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
FAM78B-203ENST00000435676 ADGRL1O94910 1474 aa12.16□□□□□ -0.46
FAM78B-203ENST00000435676 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
FAM78B-203ENST00000435676 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
FAM78B-203ENST00000435676 SOX12O15370 315 aa12.16□□□□□ -0.46
FAM78B-203ENST00000435676 KIF14Q15058 1648 aa12.15□□□□□ -0.46
FAM78B-203ENST00000435676 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
FAM78B-203ENST00000435676 TXNDC2Q86VQ3 553 aa12.15□□□□□ -0.46
FAM78B-203ENST00000435676 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
FAM78B-203ENST00000435676 TIAM1Q13009 1591 aa12.15□□□□□ -0.47
FAM78B-203ENST00000435676 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
FAM78B-203ENST00000435676 HSPA5P11021 654 aaKnown RBP12.14□□□□□ -0.47
FAM78B-203ENST00000435676 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
FAM78B-203ENST00000435676 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
FAM78B-203ENST00000435676 NUP160Q12769 1436 aa12.14□□□□□ -0.47
FAM78B-203ENST00000435676 ATF3P18847 181 aa12.14□□□□□ -0.47
FAM78B-203ENST00000435676 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
FAM78B-203ENST00000435676 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
FAM78B-203ENST00000435676 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
FAM78B-203ENST00000435676 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
FAM78B-203ENST00000435676 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
FAM78B-203ENST00000435676 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
FAM78B-203ENST00000435676 ASXL2Q76L83 1435 aa12.13□□□□□ -0.47
FAM78B-203ENST00000435676 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
FAM78B-203ENST00000435676 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
FAM78B-203ENST00000435676 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
FAM78B-203ENST00000435676 UGGT2Q9NYU1 1516 aa12.11□□□□□ -0.47
FAM78B-203ENST00000435676 FANCAO15360 1455 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms