RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 EFCAB2Q5VUJ9 269 aa13.61□□□□□ -0.23
LDLRAD4-204ENST00000435606 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
LDLRAD4-204ENST00000435606 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
LDLRAD4-204ENST00000435606 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
LDLRAD4-204ENST00000435606 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
LDLRAD4-204ENST00000435606 MIER1Q8N108 512 aa13.58□□□□□ -0.23
LDLRAD4-204ENST00000435606 G3V3G9 751 aa13.58□□□□□ -0.24
LDLRAD4-204ENST00000435606 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
LDLRAD4-204ENST00000435606 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
LDLRAD4-204ENST00000435606 GNL2Q13823 731 aaKnown RBP13.58□□□□□ -0.24
LDLRAD4-204ENST00000435606 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD4-204ENST00000435606 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
LDLRAD4-204ENST00000435606 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
LDLRAD4-204ENST00000435606 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
LDLRAD4-204ENST00000435606 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
LDLRAD4-204ENST00000435606 L1TD1Q5T7N2 865 aaKnown RBP13.54□□□□□ -0.24
LDLRAD4-204ENST00000435606 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
LDLRAD4-204ENST00000435606 SOGA1O94964 1423 aa13.53□□□□□ -0.24
LDLRAD4-204ENST00000435606 RGS3P49796 1198 aa13.53□□□□□ -0.24
LDLRAD4-204ENST00000435606 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
LDLRAD4-204ENST00000435606 AEBP2Q6ZN18 517 aaPredicted RBP13.53□□□□□ -0.24
LDLRAD4-204ENST00000435606 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.24
LDLRAD4-204ENST00000435606 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
LDLRAD4-204ENST00000435606 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
LDLRAD4-204ENST00000435606 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
LDLRAD4-204ENST00000435606 FMN1Q68DA7 1419 aa13.51□□□□□ -0.25
LDLRAD4-204ENST00000435606 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-204ENST00000435606 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
LDLRAD4-204ENST00000435606 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
LDLRAD4-204ENST00000435606 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
LDLRAD4-204ENST00000435606 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-204ENST00000435606 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-204ENST00000435606 PKD2Q13563 968 aa13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 STK31Q9BXU1 1019 aa13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
LDLRAD4-204ENST00000435606 WASHC2CQ9Y4E1 1318 aa13.48□□□□□ -0.25
LDLRAD4-204ENST00000435606 CHAF1AQ13111 956 aaPredicted RBP13.48□□□□□ -0.25
LDLRAD4-204ENST00000435606 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
LDLRAD4-204ENST00000435606 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
LDLRAD4-204ENST00000435606 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
LDLRAD4-204ENST00000435606 KIF3BO15066 747 aa13.47□□□□□ -0.25
LDLRAD4-204ENST00000435606 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
LDLRAD4-204ENST00000435606 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.26
LDLRAD4-204ENST00000435606 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.26
LDLRAD4-204ENST00000435606 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.26
LDLRAD4-204ENST00000435606 NUP155O75694 1391 aa13.46□□□□□ -0.26
LDLRAD4-204ENST00000435606 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
LDLRAD4-204ENST00000435606 AMPHP49418 695 aa13.44□□□□□ -0.26
LDLRAD4-204ENST00000435606 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
LDLRAD4-204ENST00000435606 CCDC34Q96HJ3 373 aa13.43□□□□□ -0.26
LDLRAD4-204ENST00000435606 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
LDLRAD4-204ENST00000435606 EVA1CP58658 441 aa13.43□□□□□ -0.26
LDLRAD4-204ENST00000435606 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
LDLRAD4-204ENST00000435606 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
LDLRAD4-204ENST00000435606 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
LDLRAD4-204ENST00000435606 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
LDLRAD4-204ENST00000435606 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
LDLRAD4-204ENST00000435606 APBB1O00213 710 aa13.4□□□□□ -0.26
LDLRAD4-204ENST00000435606 HMMRO75330 724 aa13.4□□□□□ -0.26
LDLRAD4-204ENST00000435606 RALBP1Q15311 655 aa13.39□□□□□ -0.27
LDLRAD4-204ENST00000435606 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
LDLRAD4-204ENST00000435606 ERICH6BQ5W0A0 696 aa13.38□□□□□ -0.27
LDLRAD4-204ENST00000435606 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
LDLRAD4-204ENST00000435606 PTMSP20962 102 aa13.37□□□□□ -0.27
LDLRAD4-204ENST00000435606 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD4-204ENST00000435606 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
LDLRAD4-204ENST00000435606 MSH5O43196 834 aa13.36□□□□□ -0.27
LDLRAD4-204ENST00000435606 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
LDLRAD4-204ENST00000435606 TPM4P67936 248 aa13.35□□□□□ -0.27
LDLRAD4-204ENST00000435606 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
LDLRAD4-204ENST00000435606 PRM3Q9NNZ6 103 aa13.35□□□□□ -0.27
LDLRAD4-204ENST00000435606 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
LDLRAD4-204ENST00000435606 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
LDLRAD4-204ENST00000435606 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
LDLRAD4-204ENST00000435606 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
LDLRAD4-204ENST00000435606 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
LDLRAD4-204ENST00000435606 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
LDLRAD4-204ENST00000435606 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
LDLRAD4-204ENST00000435606 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
LDLRAD4-204ENST00000435606 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
LDLRAD4-204ENST00000435606 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
LDLRAD4-204ENST00000435606 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
LDLRAD4-204ENST00000435606 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
LDLRAD4-204ENST00000435606 FOXD1Q16676 465 aa13.32□□□□□ -0.28
LDLRAD4-204ENST00000435606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
LDLRAD4-204ENST00000435606 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 VPS53Q5VIR6 699 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 TRIM34Q9BYJ4 488 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 CCER2I3L3R5 266 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 MARCH6O60337 910 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 NOL10Q9BSC4 688 aaKnown RBP13.31□□□□□ -0.28
LDLRAD4-204ENST00000435606 SLC4A10Q6U841 1118 aa13.3□□□□□ -0.28
LDLRAD4-204ENST00000435606 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
LDLRAD4-204ENST00000435606 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms