RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 PLCH2O75038 1416 aa22.08■■□□□ 1.13
CDC42EP1-204ENST00000434728 YEATS2Q9ULM3 1422 aa22.08■■□□□ 1.13
CDC42EP1-204ENST00000434728 MLECQ14165 292 aa22.08■■□□□ 1.13
CDC42EP1-204ENST00000434728 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
CDC42EP1-204ENST00000434728 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
CDC42EP1-204ENST00000434728 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
CDC42EP1-204ENST00000434728 KIF14Q15058 1648 aa22.05■■□□□ 1.12
CDC42EP1-204ENST00000434728 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
CDC42EP1-204ENST00000434728 FER1L4A9Z1Z3 1794 aa22.04■■□□□ 1.12
CDC42EP1-204ENST00000434728 CLIP1P30622 1438 aa22.04■■□□□ 1.12
CDC42EP1-204ENST00000434728 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
CDC42EP1-204ENST00000434728 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
CDC42EP1-204ENST00000434728 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
CDC42EP1-204ENST00000434728 HSPA2P54652 639 aa21.99■■□□□ 1.11
CDC42EP1-204ENST00000434728 ATP10AO60312 1499 aa21.98■■□□□ 1.11
CDC42EP1-204ENST00000434728 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
CDC42EP1-204ENST00000434728 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
CDC42EP1-204ENST00000434728 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
CDC42EP1-204ENST00000434728 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
CDC42EP1-204ENST00000434728 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
CDC42EP1-204ENST00000434728 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
CDC42EP1-204ENST00000434728 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
CDC42EP1-204ENST00000434728 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
CDC42EP1-204ENST00000434728 KDM5CP41229 1560 aa21.87■■□□□ 1.09
CDC42EP1-204ENST00000434728 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
CDC42EP1-204ENST00000434728 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
CDC42EP1-204ENST00000434728 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
CDC42EP1-204ENST00000434728 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
CDC42EP1-204ENST00000434728 CASKIN1Q8WXD9 1431 aa21.84■■□□□ 1.09
CDC42EP1-204ENST00000434728 CEBPAP49715 358 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP1-204ENST00000434728 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.09
CDC42EP1-204ENST00000434728 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
CDC42EP1-204ENST00000434728 ABCC1P33527 1531 aa21.8■■□□□ 1.08
CDC42EP1-204ENST00000434728 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
CDC42EP1-204ENST00000434728 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
CDC42EP1-204ENST00000434728 MLH3Q9UHC1 1453 aa21.78■■□□□ 1.08
CDC42EP1-204ENST00000434728 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.08
CDC42EP1-204ENST00000434728 CERKQ8TCT0 537 aa21.77■■□□□ 1.08
CDC42EP1-204ENST00000434728 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
CDC42EP1-204ENST00000434728 REREQ9P2R6 1566 aa21.77■■□□□ 1.08
CDC42EP1-204ENST00000434728 SETD1BQ9UPS6 1966 aaKnown RBP21.76■■□□□ 1.07
CDC42EP1-204ENST00000434728 CDC42BPAQ5VT25 1732 aa21.76■■□□□ 1.07
CDC42EP1-204ENST00000434728 TRAPPC8Q9Y2L5 1435 aa21.76■■□□□ 1.07
CDC42EP1-204ENST00000434728 DMRT2Q9Y5R5 561 aa21.75■■□□□ 1.07
CDC42EP1-204ENST00000434728 C3P01024 1663 aa21.72■■□□□ 1.07
CDC42EP1-204ENST00000434728 AGLP35573 1532 aa21.71■■□□□ 1.07
CDC42EP1-204ENST00000434728 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
CDC42EP1-204ENST00000434728 SYCP2Q9BX26 1530 aa21.68■■□□□ 1.06
CDC42EP1-204ENST00000434728 STRCQ7RTU9 1775 aa21.67■■□□□ 1.06
CDC42EP1-204ENST00000434728 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
CDC42EP1-204ENST00000434728 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
CDC42EP1-204ENST00000434728 SPAG9O60271 1321 aaKnown RBP21.66■■□□□ 1.06
CDC42EP1-204ENST00000434728 CCNB3Q8WWL7 1395 aa21.64■■□□□ 1.06
CDC42EP1-204ENST00000434728 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
CDC42EP1-204ENST00000434728 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
CDC42EP1-204ENST00000434728 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.05
CDC42EP1-204ENST00000434728 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
CDC42EP1-204ENST00000434728 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
CDC42EP1-204ENST00000434728 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
CDC42EP1-204ENST00000434728 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
CDC42EP1-204ENST00000434728 MROH2AA6NES4 1674 aa21.58■■□□□ 1.05
CDC42EP1-204ENST00000434728 PTPRTO14522 1441 aa21.56■■□□□ 1.04
CDC42EP1-204ENST00000434728 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
CDC42EP1-204ENST00000434728 INO80Q9ULG1 1556 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP1-204ENST00000434728 A2MP01023 1474 aa21.54■■□□□ 1.04
CDC42EP1-204ENST00000434728 NPATQ14207 1427 aa21.54■■□□□ 1.04
CDC42EP1-204ENST00000434728 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
CDC42EP1-204ENST00000434728 ZMYM3Q14202 1370 aa21.53■■□□□ 1.04
CDC42EP1-204ENST00000434728 GGT6Q6P531 493 aa21.52■■□□□ 1.04
CDC42EP1-204ENST00000434728 NCOA1Q15788 1441 aa21.52■■□□□ 1.04
CDC42EP1-204ENST00000434728 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
CDC42EP1-204ENST00000434728 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
CDC42EP1-204ENST00000434728 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
CDC42EP1-204ENST00000434728 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
CDC42EP1-204ENST00000434728 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
CDC42EP1-204ENST00000434728 MYO3AQ8NEV4 1616 aa21.46■■□□□ 1.03
CDC42EP1-204ENST00000434728 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
CDC42EP1-204ENST00000434728 ZNF644Q9H582 1327 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP1-204ENST00000434728 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
CDC42EP1-204ENST00000434728 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP1-204ENST00000434728 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
CDC42EP1-204ENST00000434728 LTBP4Q8N2S1 1624 aa21.42■■□□□ 1.02
CDC42EP1-204ENST00000434728 CEP170BQ9Y4F5 1589 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP1-204ENST00000434728 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
CDC42EP1-204ENST00000434728 PTPRKQ15262 1439 aa21.4■■□□□ 1.02
CDC42EP1-204ENST00000434728 IQSEC2Q5JU85 1478 aa21.39■■□□□ 1.02
CDC42EP1-204ENST00000434728 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
CDC42EP1-204ENST00000434728 PKD2Q13563 968 aa21.38■■□□□ 1.01
CDC42EP1-204ENST00000434728 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
CDC42EP1-204ENST00000434728 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
CDC42EP1-204ENST00000434728 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
CDC42EP1-204ENST00000434728 ZNF335Q9H4Z2 1342 aaPredicted RBP21.35■■□□□ 1.01
CDC42EP1-204ENST00000434728 CAMSAP2Q08AD1 1489 aa21.35■■□□□ 1.01
CDC42EP1-204ENST00000434728 KIF3BO15066 747 aa21.35■■□□□ 1.01
CDC42EP1-204ENST00000434728 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
CDC42EP1-204ENST00000434728 NCOA2Q15596 1464 aa21.34■■□□□ 1.01
CDC42EP1-204ENST00000434728 SPATA31D1Q6ZQQ2 1576 aa21.33■■□□□ 1.01
CDC42EP1-204ENST00000434728 A2ML1A8K2U0 1454 aa21.32■■□□□ 1
CDC42EP1-204ENST00000434728 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
CDC42EP1-204ENST00000434728 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms