RNA–Protein interactions for RNA: ENST00000434266.1

EPHA4-207, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 617 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-207ENST00000434266 SHROOM2Q13796 1616 aa12.05□□□□□ -0.48
EPHA4-207ENST00000434266 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
EPHA4-207ENST00000434266 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
EPHA4-207ENST00000434266 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
EPHA4-207ENST00000434266 PTPRGP23470 1445 aa12.01□□□□□ -0.49
EPHA4-207ENST00000434266 CASKIN1Q8WXD9 1431 aa12□□□□□ -0.49
EPHA4-207ENST00000434266 PKD2Q13563 968 aa11.97□□□□□ -0.49
EPHA4-207ENST00000434266 FYCO1Q9BQS8 1478 aa11.96□□□□□ -0.49
EPHA4-207ENST00000434266 MAP3K1Q13233 1512 aa11.96□□□□□ -0.5
EPHA4-207ENST00000434266 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
EPHA4-207ENST00000434266 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
EPHA4-207ENST00000434266 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
EPHA4-207ENST00000434266 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
EPHA4-207ENST00000434266 CDK11AQ9UQ88 783 aaPredicted RBP11.9□□□□□ -0.5
EPHA4-207ENST00000434266 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
EPHA4-207ENST00000434266 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
EPHA4-207ENST00000434266 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
EPHA4-207ENST00000434266 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
EPHA4-207ENST00000434266 ABCA8O94911 1581 aa11.89□□□□□ -0.51
EPHA4-207ENST00000434266 NUBP1P53384 320 aa11.89□□□□□ -0.51
EPHA4-207ENST00000434266 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
EPHA4-207ENST00000434266 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
EPHA4-207ENST00000434266 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
EPHA4-207ENST00000434266 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
EPHA4-207ENST00000434266 HECW1Q76N89 1606 aa11.87□□□□□ -0.51
EPHA4-207ENST00000434266 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
EPHA4-207ENST00000434266 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
EPHA4-207ENST00000434266 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
EPHA4-207ENST00000434266 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
EPHA4-207ENST00000434266 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
EPHA4-207ENST00000434266 GSE1Q14687 1217 aa11.85□□□□□ -0.51
EPHA4-207ENST00000434266 KANK4Q5T7N3 995 aaPredicted RBP11.85□□□□□ -0.51
EPHA4-207ENST00000434266 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
EPHA4-207ENST00000434266 ABCC2Q92887 1545 aa11.85□□□□□ -0.51
EPHA4-207ENST00000434266 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
EPHA4-207ENST00000434266 ATP10BO94823 1461 aa11.84□□□□□ -0.51
EPHA4-207ENST00000434266 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
EPHA4-207ENST00000434266 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
EPHA4-207ENST00000434266 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
EPHA4-207ENST00000434266 KDM5BQ9UGL1 1544 aa11.82□□□□□ -0.52
EPHA4-207ENST00000434266 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
EPHA4-207ENST00000434266 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
EPHA4-207ENST00000434266 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
EPHA4-207ENST00000434266 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
EPHA4-207ENST00000434266 CDK13Q14004 1512 aaKnown RBP11.78□□□□□ -0.52
EPHA4-207ENST00000434266 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
EPHA4-207ENST00000434266 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
EPHA4-207ENST00000434266 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
EPHA4-207ENST00000434266 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.52
EPHA4-207ENST00000434266 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
EPHA4-207ENST00000434266 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
EPHA4-207ENST00000434266 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
EPHA4-207ENST00000434266 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
EPHA4-207ENST00000434266 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
EPHA4-207ENST00000434266 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
EPHA4-207ENST00000434266 MAGI3Q5TCQ9 1506 aa11.73□□□□□ -0.53
EPHA4-207ENST00000434266 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
EPHA4-207ENST00000434266 RGL2O15211 777 aa11.72□□□□□ -0.53
EPHA4-207ENST00000434266 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
EPHA4-207ENST00000434266 ZCCHC11Q5TAX3 1644 aaKnown RBP11.7□□□□□ -0.54
EPHA4-207ENST00000434266 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
EPHA4-207ENST00000434266 CCNB3Q8WWL7 1395 aa11.69□□□□□ -0.54
EPHA4-207ENST00000434266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.69□□□□□ -0.54
EPHA4-207ENST00000434266 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
EPHA4-207ENST00000434266 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
EPHA4-207ENST00000434266 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
EPHA4-207ENST00000434266 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
EPHA4-207ENST00000434266 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
EPHA4-207ENST00000434266 KIF13AQ9H1H9 1805 aa11.68□□□□□ -0.54
EPHA4-207ENST00000434266 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
EPHA4-207ENST00000434266 MAPKBP1O60336 1514 aa11.67□□□□□ -0.54
EPHA4-207ENST00000434266 ABCC10Q5T3U5 1492 aa11.67□□□□□ -0.54
EPHA4-207ENST00000434266 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
EPHA4-207ENST00000434266 KIF14Q15058 1648 aa11.65□□□□□ -0.54
EPHA4-207ENST00000434266 CHRM1P11229 460 aaPredicted RBP11.65□□□□□ -0.54
EPHA4-207ENST00000434266 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
EPHA4-207ENST00000434266 FGD6Q6ZV73 1430 aa11.65□□□□□ -0.54
EPHA4-207ENST00000434266 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
EPHA4-207ENST00000434266 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
EPHA4-207ENST00000434266 PLCH2O75038 1416 aa11.62□□□□□ -0.55
EPHA4-207ENST00000434266 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
EPHA4-207ENST00000434266 RNF25Q96BH1 459 aaPredicted RBP11.62□□□□□ -0.55
EPHA4-207ENST00000434266 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
EPHA4-207ENST00000434266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.61□□□□□ -0.55
EPHA4-207ENST00000434266 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
EPHA4-207ENST00000434266 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
EPHA4-207ENST00000434266 TCOF1Q13428 1488 aaKnown RBP11.61□□□□□ -0.55
EPHA4-207ENST00000434266 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
EPHA4-207ENST00000434266 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
EPHA4-207ENST00000434266 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
EPHA4-207ENST00000434266 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
EPHA4-207ENST00000434266 PYGBP11216 843 aa11.59□□□□□ -0.55
EPHA4-207ENST00000434266 FAM50AQ14320 339 aaKnown RBP11.59□□□□□ -0.55
EPHA4-207ENST00000434266 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
EPHA4-207ENST00000434266 GLI2P10070 1586 aa11.58□□□□□ -0.56
EPHA4-207ENST00000434266 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
EPHA4-207ENST00000434266 CD109Q6YHK3 1445 aa11.57□□□□□ -0.56
EPHA4-207ENST00000434266 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
EPHA4-207ENST00000434266 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
EPHA4-207ENST00000434266 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms