RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ABCC10Q5T3U5 1492 aa21.05■□□□□ 0.96
CALD1-207ENST00000430085 WDR7Q9Y4E6 1490 aa21.05■□□□□ 0.96
CALD1-207ENST00000430085 CAMSAP2Q08AD1 1489 aa21.03■□□□□ 0.96
CALD1-207ENST00000430085 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
CALD1-207ENST00000430085 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
CALD1-207ENST00000430085 NAIPQ13075 1403 aa21.03■□□□□ 0.96
CALD1-207ENST00000430085 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
CALD1-207ENST00000430085 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
CALD1-207ENST00000430085 CDC42BPAQ5VT25 1732 aa21.02■□□□□ 0.96
CALD1-207ENST00000430085 DAPK1P53355 1430 aa21.02■□□□□ 0.96
CALD1-207ENST00000430085 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
CALD1-207ENST00000430085 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
CALD1-207ENST00000430085 ZNF777Q9ULD5 760 aaPredicted RBP21■□□□□ 0.95
CALD1-207ENST00000430085 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
CALD1-207ENST00000430085 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
CALD1-207ENST00000430085 ABCC5O15440 1437 aa20.98■□□□□ 0.95
CALD1-207ENST00000430085 KCNH8Q96L42 1107 aa20.98■□□□□ 0.95
CALD1-207ENST00000430085 RRP7BPQ9NSQ0 103 aa20.98■□□□□ 0.95
CALD1-207ENST00000430085 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
CALD1-207ENST00000430085 ROCK1Q13464 1354 aa20.95■□□□□ 0.94
CALD1-207ENST00000430085 GLI2P10070 1586 aa20.93■□□□□ 0.94
CALD1-207ENST00000430085 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
CALD1-207ENST00000430085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.94
CALD1-207ENST00000430085 TTC37Q6PGP7 1564 aa20.9■□□□□ 0.94
CALD1-207ENST00000430085 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
CALD1-207ENST00000430085 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.93
CALD1-207ENST00000430085 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
CALD1-207ENST00000430085 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
CALD1-207ENST00000430085 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
CALD1-207ENST00000430085 ADGBQ8N7X0 1667 aa20.88■□□□□ 0.93
CALD1-207ENST00000430085 MYO5CQ9NQX4 1742 aa20.86■□□□□ 0.93
CALD1-207ENST00000430085 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
CALD1-207ENST00000430085 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
CALD1-207ENST00000430085 KDM6BO15054 1643 aa20.84■□□□□ 0.93
CALD1-207ENST00000430085 SAMD9LQ8IVG5 1584 aa20.84■□□□□ 0.93
CALD1-207ENST00000430085 ADGRL2O95490 1459 aa20.83■□□□□ 0.93
CALD1-207ENST00000430085 PPRC1Q5VV67 1664 aaKnown RBP20.83■□□□□ 0.93
CALD1-207ENST00000430085 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.92
CALD1-207ENST00000430085 ARHGEF5Q12774 1597 aa20.83■□□□□ 0.92
CALD1-207ENST00000430085 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
CALD1-207ENST00000430085 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
CALD1-207ENST00000430085 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
CALD1-207ENST00000430085 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
CALD1-207ENST00000430085 TSPY4P0CV99 314 aa20.8■□□□□ 0.92
CALD1-207ENST00000430085 TSPY10P0CW01 314 aa20.8■□□□□ 0.92
CALD1-207ENST00000430085 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
CALD1-207ENST00000430085 C9orf84Q5VXU9 1444 aa20.8■□□□□ 0.92
CALD1-207ENST00000430085 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
CALD1-207ENST00000430085 MBD5Q9P267 1494 aa20.78■□□□□ 0.92
CALD1-207ENST00000430085 PLCH2O75038 1416 aa20.78■□□□□ 0.92
CALD1-207ENST00000430085 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
CALD1-207ENST00000430085 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
CALD1-207ENST00000430085 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
CALD1-207ENST00000430085 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
CALD1-207ENST00000430085 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
CALD1-207ENST00000430085 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
CALD1-207ENST00000430085 EFCAB2Q5VUJ9 269 aa20.73■□□□□ 0.91
CALD1-207ENST00000430085 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
CALD1-207ENST00000430085 KIAA1107Q9UPP5 1409 aa20.73■□□□□ 0.91
CALD1-207ENST00000430085 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
CALD1-207ENST00000430085 TEX14Q8IWB6 1497 aa20.71■□□□□ 0.91
CALD1-207ENST00000430085 ANKRD50Q9ULJ7 1429 aa20.71■□□□□ 0.91
CALD1-207ENST00000430085 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
CALD1-207ENST00000430085 FANCAO15360 1455 aa20.68■□□□□ 0.9
CALD1-207ENST00000430085 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
CALD1-207ENST00000430085 MAST1Q9Y2H9 1570 aa20.67■□□□□ 0.9
CALD1-207ENST00000430085 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
CALD1-207ENST00000430085 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
CALD1-207ENST00000430085 ABCC1P33527 1531 aa20.66■□□□□ 0.9
CALD1-207ENST00000430085 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
CALD1-207ENST00000430085 NEO1Q92859 1461 aa20.64■□□□□ 0.89
CALD1-207ENST00000430085 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
CALD1-207ENST00000430085 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
CALD1-207ENST00000430085 PLXNC1O60486 1568 aa20.6■□□□□ 0.89
CALD1-207ENST00000430085 PZPP20742 1482 aa20.6■□□□□ 0.89
CALD1-207ENST00000430085 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
CALD1-207ENST00000430085 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.89
CALD1-207ENST00000430085 FOXD1Q16676 465 aa20.58■□□□□ 0.88
CALD1-207ENST00000430085 ADGRL1O94910 1474 aa20.58■□□□□ 0.88
CALD1-207ENST00000430085 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
CALD1-207ENST00000430085 TRAPPC8Q9Y2L5 1435 aa20.56■□□□□ 0.88
CALD1-207ENST00000430085 NUP155O75694 1391 aa20.56■□□□□ 0.88
CALD1-207ENST00000430085 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
CALD1-207ENST00000430085 KDM5DQ9BY66 1539 aa20.54■□□□□ 0.88
CALD1-207ENST00000430085 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
CALD1-207ENST00000430085 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
CALD1-207ENST00000430085 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.88
CALD1-207ENST00000430085 RICTORQ6R327 1708 aa20.52■□□□□ 0.88
CALD1-207ENST00000430085 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
CALD1-207ENST00000430085 RAPGEF3O95398 923 aa20.51■□□□□ 0.87
CALD1-207ENST00000430085 PKD2Q13563 968 aa20.5■□□□□ 0.87
CALD1-207ENST00000430085 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
CALD1-207ENST00000430085 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
CALD1-207ENST00000430085 ERBINQ96RT1 1412 aa20.49■□□□□ 0.87
CALD1-207ENST00000430085 RPRD2Q5VT52 1461 aaKnown RBP20.49■□□□□ 0.87
CALD1-207ENST00000430085 POGZQ7Z3K3 1410 aa20.48■□□□□ 0.87
CALD1-207ENST00000430085 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
CALD1-207ENST00000430085 UNC13BO14795 1591 aa20.47■□□□□ 0.87
CALD1-207ENST00000430085 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
CALD1-207ENST00000430085 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms