RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
GABPB1-205ENST00000429662 BCORL1Q5H9F3 1711 aa13.09□□□□□ -0.31
GABPB1-205ENST00000429662 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
GABPB1-205ENST00000429662 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
GABPB1-205ENST00000429662 ARAP3Q8WWN8 1544 aa13.06□□□□□ -0.32
GABPB1-205ENST00000429662 CLIP1P30622 1438 aa13.05□□□□□ -0.32
GABPB1-205ENST00000429662 FRMPD1Q5SYB0 1578 aa13.05□□□□□ -0.32
GABPB1-205ENST00000429662 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
GABPB1-205ENST00000429662 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
GABPB1-205ENST00000429662 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
GABPB1-205ENST00000429662 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
GABPB1-205ENST00000429662 ZBTB22O15209 634 aa13.02□□□□□ -0.33
GABPB1-205ENST00000429662 SPATA31D1Q6ZQQ2 1576 aa13.02□□□□□ -0.33
GABPB1-205ENST00000429662 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.33
GABPB1-205ENST00000429662 CD109Q6YHK3 1445 aa13□□□□□ -0.33
GABPB1-205ENST00000429662 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
GABPB1-205ENST00000429662 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
GABPB1-205ENST00000429662 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
GABPB1-205ENST00000429662 ABCA8O94911 1581 aa12.99□□□□□ -0.33
GABPB1-205ENST00000429662 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
GABPB1-205ENST00000429662 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
GABPB1-205ENST00000429662 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
GABPB1-205ENST00000429662 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
GABPB1-205ENST00000429662 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
GABPB1-205ENST00000429662 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
GABPB1-205ENST00000429662 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
GABPB1-205ENST00000429662 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-205ENST00000429662 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
GABPB1-205ENST00000429662 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
GABPB1-205ENST00000429662 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
GABPB1-205ENST00000429662 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
GABPB1-205ENST00000429662 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
GABPB1-205ENST00000429662 HSPA2P54652 639 aa12.92□□□□□ -0.34
GABPB1-205ENST00000429662 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-205ENST00000429662 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
GABPB1-205ENST00000429662 RICTORQ6R327 1708 aa12.9□□□□□ -0.34
GABPB1-205ENST00000429662 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
GABPB1-205ENST00000429662 TTC37Q6PGP7 1564 aa12.87□□□□□ -0.35
GABPB1-205ENST00000429662 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
GABPB1-205ENST00000429662 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
GABPB1-205ENST00000429662 NEO1Q92859 1461 aa12.83□□□□□ -0.36
GABPB1-205ENST00000429662 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
GABPB1-205ENST00000429662 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
GABPB1-205ENST00000429662 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
GABPB1-205ENST00000429662 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
GABPB1-205ENST00000429662 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
GABPB1-205ENST00000429662 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
GABPB1-205ENST00000429662 ATP10BO94823 1461 aa12.8□□□□□ -0.36
GABPB1-205ENST00000429662 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
GABPB1-205ENST00000429662 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-205ENST00000429662 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
GABPB1-205ENST00000429662 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
GABPB1-205ENST00000429662 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
GABPB1-205ENST00000429662 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
GABPB1-205ENST00000429662 MAP3K1Q13233 1512 aa12.75□□□□□ -0.37
GABPB1-205ENST00000429662 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
GABPB1-205ENST00000429662 FANCAO15360 1455 aa12.72□□□□□ -0.37
GABPB1-205ENST00000429662 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
GABPB1-205ENST00000429662 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
GABPB1-205ENST00000429662 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
GABPB1-205ENST00000429662 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
GABPB1-205ENST00000429662 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
GABPB1-205ENST00000429662 DENND4BO75064 1496 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-205ENST00000429662 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
GABPB1-205ENST00000429662 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-205ENST00000429662 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
GABPB1-205ENST00000429662 PTPRTO14522 1441 aa12.68□□□□□ -0.38
GABPB1-205ENST00000429662 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
GABPB1-205ENST00000429662 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
GABPB1-205ENST00000429662 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
GABPB1-205ENST00000429662 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
GABPB1-205ENST00000429662 SAMD9Q5K651 1589 aa12.66□□□□□ -0.38
GABPB1-205ENST00000429662 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
GABPB1-205ENST00000429662 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
GABPB1-205ENST00000429662 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-205ENST00000429662 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
GABPB1-205ENST00000429662 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
GABPB1-205ENST00000429662 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
GABPB1-205ENST00000429662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.64□□□□□ -0.392e-9■■■■■ 40.7
GABPB1-205ENST00000429662 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
GABPB1-205ENST00000429662 C3P01024 1663 aa12.64□□□□□ -0.39
GABPB1-205ENST00000429662 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-205ENST00000429662 MAGI2Q86UL8 1455 aa12.64□□□□□ -0.39
GABPB1-205ENST00000429662 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
GABPB1-205ENST00000429662 MIER1Q8N108 512 aa12.63□□□□□ -0.39
GABPB1-205ENST00000429662 NCOA1Q15788 1441 aa12.59□□□□□ -0.39
GABPB1-205ENST00000429662 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-205ENST00000429662 TIAM1Q13009 1591 aa12.59□□□□□ -0.39
GABPB1-205ENST00000429662 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
GABPB1-205ENST00000429662 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
GABPB1-205ENST00000429662 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-205ENST00000429662 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
GABPB1-205ENST00000429662 ATP10AO60312 1499 aa12.56□□□□□ -0.4
GABPB1-205ENST00000429662 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
GABPB1-205ENST00000429662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.55□□□□□ -0.43e-6■■□□□ 12.8
GABPB1-205ENST00000429662 LRRC9Q6ZRR7 1453 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 KDM5CP41229 1560 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 REREQ9P2R6 1566 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms