RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 KCNA4P22459 653 aa17.9■□□□□ 0.46
APOBEC3C-202ENST00000428892 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
APOBEC3C-202ENST00000428892 SIGLEC1Q9BZZ2 1709 aa17.89■□□□□ 0.46
APOBEC3C-202ENST00000428892 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
APOBEC3C-202ENST00000428892 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
APOBEC3C-202ENST00000428892 MLECQ14165 292 aa17.87■□□□□ 0.45
APOBEC3C-202ENST00000428892 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
APOBEC3C-202ENST00000428892 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
APOBEC3C-202ENST00000428892 HSPA2P54652 639 aa17.85■□□□□ 0.45
APOBEC3C-202ENST00000428892 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
APOBEC3C-202ENST00000428892 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.45
APOBEC3C-202ENST00000428892 KIF14Q15058 1648 aa17.82■□□□□ 0.44
APOBEC3C-202ENST00000428892 PLCH2O75038 1416 aa17.81■□□□□ 0.44
APOBEC3C-202ENST00000428892 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
APOBEC3C-202ENST00000428892 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
APOBEC3C-202ENST00000428892 ATP10AO60312 1499 aa17.78■□□□□ 0.44
APOBEC3C-202ENST00000428892 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
APOBEC3C-202ENST00000428892 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
APOBEC3C-202ENST00000428892 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
APOBEC3C-202ENST00000428892 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.43
APOBEC3C-202ENST00000428892 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
APOBEC3C-202ENST00000428892 ZNF518AQ6AHZ1 1483 aa17.75■□□□□ 0.43
APOBEC3C-202ENST00000428892 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
APOBEC3C-202ENST00000428892 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
APOBEC3C-202ENST00000428892 CLIP1P30622 1438 aa17.74■□□□□ 0.43
APOBEC3C-202ENST00000428892 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
APOBEC3C-202ENST00000428892 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
APOBEC3C-202ENST00000428892 SETD1BQ9UPS6 1966 aaKnown RBP17.71■□□□□ 0.43
APOBEC3C-202ENST00000428892 KDM5CP41229 1560 aa17.7■□□□□ 0.42
APOBEC3C-202ENST00000428892 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
APOBEC3C-202ENST00000428892 UHRF1BP1Q6BDS2 1440 aa17.69■□□□□ 0.42
APOBEC3C-202ENST00000428892 DIP2CQ9Y2E4 1556 aa17.69■□□□□ 0.42
APOBEC3C-202ENST00000428892 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
APOBEC3C-202ENST00000428892 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
APOBEC3C-202ENST00000428892 C3P01024 1663 aa17.68■□□□□ 0.42
APOBEC3C-202ENST00000428892 TROQ12816 1431 aaPredicted RBP17.68■□□□□ 0.42
APOBEC3C-202ENST00000428892 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
APOBEC3C-202ENST00000428892 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
APOBEC3C-202ENST00000428892 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
APOBEC3C-202ENST00000428892 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
APOBEC3C-202ENST00000428892 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
APOBEC3C-202ENST00000428892 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
APOBEC3C-202ENST00000428892 REREQ9P2R6 1566 aa17.65■□□□□ 0.42
APOBEC3C-202ENST00000428892 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
APOBEC3C-202ENST00000428892 ABCC1P33527 1531 aa17.62■□□□□ 0.41
APOBEC3C-202ENST00000428892 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
APOBEC3C-202ENST00000428892 CDC42BPAQ5VT25 1732 aa17.61■□□□□ 0.41
APOBEC3C-202ENST00000428892 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
APOBEC3C-202ENST00000428892 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
APOBEC3C-202ENST00000428892 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
APOBEC3C-202ENST00000428892 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
APOBEC3C-202ENST00000428892 AGLP35573 1532 aa17.57■□□□□ 0.4
APOBEC3C-202ENST00000428892 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
APOBEC3C-202ENST00000428892 CNTLNQ9NXG0 1405 aa17.54■□□□□ 0.4
APOBEC3C-202ENST00000428892 TRAPPC8Q9Y2L5 1435 aa17.54■□□□□ 0.4
APOBEC3C-202ENST00000428892 SPATA31D1Q6ZQQ2 1576 aa17.53■□□□□ 0.4
APOBEC3C-202ENST00000428892 PTPRTO14522 1441 aa17.53■□□□□ 0.4
APOBEC3C-202ENST00000428892 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
APOBEC3C-202ENST00000428892 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
APOBEC3C-202ENST00000428892 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
APOBEC3C-202ENST00000428892 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
APOBEC3C-202ENST00000428892 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
APOBEC3C-202ENST00000428892 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
APOBEC3C-202ENST00000428892 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
APOBEC3C-202ENST00000428892 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
APOBEC3C-202ENST00000428892 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.39
APOBEC3C-202ENST00000428892 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
APOBEC3C-202ENST00000428892 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
APOBEC3C-202ENST00000428892 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
APOBEC3C-202ENST00000428892 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
APOBEC3C-202ENST00000428892 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
APOBEC3C-202ENST00000428892 NPATQ14207 1427 aa17.44■□□□□ 0.38
APOBEC3C-202ENST00000428892 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
APOBEC3C-202ENST00000428892 ADGBQ8N7X0 1667 aa17.43■□□□□ 0.38
APOBEC3C-202ENST00000428892 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3C-202ENST00000428892 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
APOBEC3C-202ENST00000428892 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
APOBEC3C-202ENST00000428892 SOCS7O14512 581 aa17.41■□□□□ 0.38
APOBEC3C-202ENST00000428892 ILDR2Q71H61 639 aa17.41■□□□□ 0.38
APOBEC3C-202ENST00000428892 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
APOBEC3C-202ENST00000428892 PLEKHH2Q8IVE3 1493 aa17.41■□□□□ 0.38
APOBEC3C-202ENST00000428892 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
APOBEC3C-202ENST00000428892 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
APOBEC3C-202ENST00000428892 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
APOBEC3C-202ENST00000428892 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
APOBEC3C-202ENST00000428892 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
APOBEC3C-202ENST00000428892 A2MP01023 1474 aa17.38■□□□□ 0.37
APOBEC3C-202ENST00000428892 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
APOBEC3C-202ENST00000428892 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
APOBEC3C-202ENST00000428892 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3C-202ENST00000428892 GGT6Q6P531 493 aa17.35■□□□□ 0.37
APOBEC3C-202ENST00000428892 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
APOBEC3C-202ENST00000428892 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
APOBEC3C-202ENST00000428892 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
APOBEC3C-202ENST00000428892 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
APOBEC3C-202ENST00000428892 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
APOBEC3C-202ENST00000428892 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
APOBEC3C-202ENST00000428892 PKD2Q13563 968 aa17.32■□□□□ 0.36
APOBEC3C-202ENST00000428892 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
APOBEC3C-202ENST00000428892 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms