RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RRP7BPQ9NSQ0 103 aa14.43□□□□□ -0.1
HMGCLL1-206ENST00000428842 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
HMGCLL1-206ENST00000428842 HRCP23327 699 aa14.42□□□□□ -0.1
HMGCLL1-206ENST00000428842 ARHGAP5Q13017 1502 aa14.41□□□□□ -0.1
HMGCLL1-206ENST00000428842 CAMSAP2Q08AD1 1489 aa14.4□□□□□ -0.1
HMGCLL1-206ENST00000428842 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
HMGCLL1-206ENST00000428842 ARHGEF12Q9NZN5 1544 aa14.37□□□□□ -0.11
HMGCLL1-206ENST00000428842 SAMD9LQ8IVG5 1584 aa14.37□□□□□ -0.11
HMGCLL1-206ENST00000428842 MYO5CQ9NQX4 1742 aa14.37□□□□□ -0.11
HMGCLL1-206ENST00000428842 CD109Q6YHK3 1445 aa14.37□□□□□ -0.11
HMGCLL1-206ENST00000428842 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
HMGCLL1-206ENST00000428842 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
HMGCLL1-206ENST00000428842 PREX2Q70Z35 1606 aa14.36□□□□□ -0.11
HMGCLL1-206ENST00000428842 PLCH2O75038 1416 aa14.35□□□□□ -0.11
HMGCLL1-206ENST00000428842 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
HMGCLL1-206ENST00000428842 ABCA9Q8IUA7 1624 aa14.34□□□□□ -0.11
HMGCLL1-206ENST00000428842 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
HMGCLL1-206ENST00000428842 FANCAO15360 1455 aa14.33□□□□□ -0.11
HMGCLL1-206ENST00000428842 ABCC5O15440 1437 aa14.33□□□□□ -0.11
HMGCLL1-206ENST00000428842 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.11
HMGCLL1-206ENST00000428842 ITSN2Q9NZM3 1697 aa14.33□□□□□ -0.12
HMGCLL1-206ENST00000428842 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
HMGCLL1-206ENST00000428842 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
HMGCLL1-206ENST00000428842 MYT1LQ9UL68 1186 aa14.32□□□□□ -0.12
HMGCLL1-206ENST00000428842 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
HMGCLL1-206ENST00000428842 DAPK1P53355 1430 aa14.31□□□□□ -0.12
HMGCLL1-206ENST00000428842 KDM6BO15054 1643 aa14.31□□□□□ -0.12
HMGCLL1-206ENST00000428842 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
HMGCLL1-206ENST00000428842 MBD5Q9P267 1494 aa14.29□□□□□ -0.12
HMGCLL1-206ENST00000428842 SCAPERQ9BY12 1400 aa14.28□□□□□ -0.12
HMGCLL1-206ENST00000428842 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
HMGCLL1-206ENST00000428842 ADGRL1O94910 1474 aa14.27□□□□□ -0.13
HMGCLL1-206ENST00000428842 AKNAQ7Z591 1439 aa14.26□□□□□ -0.13
HMGCLL1-206ENST00000428842 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
HMGCLL1-206ENST00000428842 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
HMGCLL1-206ENST00000428842 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
HMGCLL1-206ENST00000428842 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
HMGCLL1-206ENST00000428842 ABCC1P33527 1531 aa14.24□□□□□ -0.13
HMGCLL1-206ENST00000428842 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
HMGCLL1-206ENST00000428842 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
HMGCLL1-206ENST00000428842 FOXD1Q16676 465 aa14.23□□□□□ -0.13
HMGCLL1-206ENST00000428842 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
HMGCLL1-206ENST00000428842 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
HMGCLL1-206ENST00000428842 NAIPQ13075 1403 aa14.23□□□□□ -0.13
HMGCLL1-206ENST00000428842 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGCLL1-206ENST00000428842 CROCC2H7BZ55 1655 aa14.19□□□□□ -0.14
HMGCLL1-206ENST00000428842 GLI2P10070 1586 aa14.17□□□□□ -0.14
HMGCLL1-206ENST00000428842 KIF15Q9NS87 1388 aa14.17□□□□□ -0.14
HMGCLL1-206ENST00000428842 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
HMGCLL1-206ENST00000428842 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
HMGCLL1-206ENST00000428842 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
HMGCLL1-206ENST00000428842 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
HMGCLL1-206ENST00000428842 PLEKHH2Q8IVE3 1493 aa14.13□□□□□ -0.15
HMGCLL1-206ENST00000428842 POGZQ7Z3K3 1410 aa14.13□□□□□ -0.15
HMGCLL1-206ENST00000428842 ANKRD30AQ9BXX3 1397 aa14.13□□□□□ -0.15
HMGCLL1-206ENST00000428842 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 FRMPD1Q5SYB0 1578 aa14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 ZFYVE16Q7Z3T8 1539 aa14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 KIDINS220Q9ULH0 1771 aa14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
HMGCLL1-206ENST00000428842 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
HMGCLL1-206ENST00000428842 MLECQ14165 292 aa14.11□□□□□ -0.15
HMGCLL1-206ENST00000428842 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 RICTORQ6R327 1708 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 NEO1Q92859 1461 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 KIF3BO15066 747 aa14.1□□□□□ -0.15
HMGCLL1-206ENST00000428842 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
HMGCLL1-206ENST00000428842 GGT6Q6P531 493 aa14.09□□□□□ -0.15
HMGCLL1-206ENST00000428842 GCC2Q8IWJ2 1684 aa14.08□□□□□ -0.15
HMGCLL1-206ENST00000428842 SIGLEC1Q9BZZ2 1709 aa14.08□□□□□ -0.16
HMGCLL1-206ENST00000428842 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
HMGCLL1-206ENST00000428842 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
HMGCLL1-206ENST00000428842 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
HMGCLL1-206ENST00000428842 INO80Q9ULG1 1556 aaPredicted RBP14.07□□□□□ -0.16
HMGCLL1-206ENST00000428842 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
HMGCLL1-206ENST00000428842 RSPH4AQ5TD94 716 aa14.06□□□□□ -0.16
HMGCLL1-206ENST00000428842 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
HMGCLL1-206ENST00000428842 NUP155O75694 1391 aa14.06□□□□□ -0.16
HMGCLL1-206ENST00000428842 TEX14Q8IWB6 1497 aa14.05□□□□□ -0.16
HMGCLL1-206ENST00000428842 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
HMGCLL1-206ENST00000428842 KDM5CP41229 1560 aa14.05□□□□□ -0.16
HMGCLL1-206ENST00000428842 CFAP74Q9C0B2 1584 aa14.05□□□□□ -0.16
HMGCLL1-206ENST00000428842 MPHOSPH9Q99550 1183 aa14.04□□□□□ -0.16
HMGCLL1-206ENST00000428842 CFAP65Q6ZU64 1925 aaKnown RBP14.04□□□□□ -0.16
HMGCLL1-206ENST00000428842 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
HMGCLL1-206ENST00000428842 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.17
HMGCLL1-206ENST00000428842 PKD2Q13563 968 aa14.01□□□□□ -0.17
HMGCLL1-206ENST00000428842 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
HMGCLL1-206ENST00000428842 ARID4BQ4LE39 1312 aaPredicted RBP14□□□□□ -0.17
HMGCLL1-206ENST00000428842 PLXNC1O60486 1568 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms