RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
CDC7-203ENST00000428239 ADGRL1O94910 1474 aa10.65□□□□□ -0.7
CDC7-203ENST00000428239 AKNAQ7Z591 1439 aa10.65□□□□□ -0.7
CDC7-203ENST00000428239 CHIC2Q9UKJ5 165 aa10.65□□□□□ -0.7
CDC7-203ENST00000428239 SUPT6HQ7KZ85 1726 aaKnown RBP10.65□□□□□ -0.7
CDC7-203ENST00000428239 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CDC7-203ENST00000428239 CFAP43Q8NDM7 1665 aa10.64□□□□□ -0.71
CDC7-203ENST00000428239 GLI2P10070 1586 aa10.64□□□□□ -0.71
CDC7-203ENST00000428239 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
CDC7-203ENST00000428239 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
CDC7-203ENST00000428239 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
CDC7-203ENST00000428239 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
CDC7-203ENST00000428239 MLECQ14165 292 aa10.63□□□□□ -0.71
CDC7-203ENST00000428239 MAP3K1Q13233 1512 aa10.62□□□□□ -0.71
CDC7-203ENST00000428239 ABCA9Q8IUA7 1624 aa10.62□□□□□ -0.71
CDC7-203ENST00000428239 MYOM3Q5VTT5 1437 aa10.62□□□□□ -0.71
CDC7-203ENST00000428239 KDM6BO15054 1643 aa10.62□□□□□ -0.71
CDC7-203ENST00000428239 DENND4BO75064 1496 aaPredicted RBP10.62□□□□□ -0.71
CDC7-203ENST00000428239 MYO5CQ9NQX4 1742 aa10.6□□□□□ -0.71
CDC7-203ENST00000428239 NEO1Q92859 1461 aa10.6□□□□□ -0.71
CDC7-203ENST00000428239 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
CDC7-203ENST00000428239 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
CDC7-203ENST00000428239 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
CDC7-203ENST00000428239 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
CDC7-203ENST00000428239 RRP7BPQ9NSQ0 103 aa10.57□□□□□ -0.72
CDC7-203ENST00000428239 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
CDC7-203ENST00000428239 CAMSAP2Q08AD1 1489 aa10.56□□□□□ -0.72
CDC7-203ENST00000428239 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
CDC7-203ENST00000428239 ITSN2Q9NZM3 1697 aa10.56□□□□□ -0.72
CDC7-203ENST00000428239 CFAP74Q9C0B2 1584 aa10.56□□□□□ -0.72
CDC7-203ENST00000428239 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
CDC7-203ENST00000428239 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
CDC7-203ENST00000428239 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
CDC7-203ENST00000428239 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
CDC7-203ENST00000428239 ZNF518AQ6AHZ1 1483 aa10.54□□□□□ -0.72
CDC7-203ENST00000428239 GGT6Q6P531 493 aa10.54□□□□□ -0.72
CDC7-203ENST00000428239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC7-203ENST00000428239 CDC42BPAQ5VT25 1732 aa10.54□□□□□ -0.72
CDC7-203ENST00000428239 POGZQ7Z3K3 1410 aa10.53□□□□□ -0.72
CDC7-203ENST00000428239 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
CDC7-203ENST00000428239 KIF3BO15066 747 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 CCDC141Q6ZP82 1450 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 SAMD9LQ8IVG5 1584 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 KIAA1107Q9UPP5 1409 aa10.51□□□□□ -0.73
CDC7-203ENST00000428239 PPRC1Q5VV67 1664 aaKnown RBP10.51□□□□□ -0.73
CDC7-203ENST00000428239 ABCC1P33527 1531 aa10.5□□□□□ -0.73
CDC7-203ENST00000428239 AEBP2Q6ZN18 517 aaPredicted RBP10.5□□□□□ -0.73
CDC7-203ENST00000428239 TRIM52Q96A61 297 aa10.5□□□□□ -0.73
CDC7-203ENST00000428239 YEATS2Q9ULM3 1422 aa10.5□□□□□ -0.73
CDC7-203ENST00000428239 ARHGEF12Q9NZN5 1544 aa10.49□□□□□ -0.73
CDC7-203ENST00000428239 ANKRD30AQ9BXX3 1397 aa10.49□□□□□ -0.73
CDC7-203ENST00000428239 C9orf84Q5VXU9 1444 aa10.49□□□□□ -0.73
CDC7-203ENST00000428239 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
CDC7-203ENST00000428239 KIF15Q9NS87 1388 aa10.47□□□□□ -0.73
CDC7-203ENST00000428239 DAPK1P53355 1430 aa10.47□□□□□ -0.73
CDC7-203ENST00000428239 ABCC5O15440 1437 aa10.46□□□□□ -0.73
CDC7-203ENST00000428239 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
CDC7-203ENST00000428239 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
CDC7-203ENST00000428239 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
CDC7-203ENST00000428239 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
CDC7-203ENST00000428239 ATP10AO60312 1499 aa10.44□□□□□ -0.74
CDC7-203ENST00000428239 HECW2Q9P2P5 1572 aa10.44□□□□□ -0.74
CDC7-203ENST00000428239 WASHC2CQ9Y4E1 1318 aa10.44□□□□□ -0.74
CDC7-203ENST00000428239 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
CDC7-203ENST00000428239 RRBP1Q9P2E9 1410 aaKnown RBP10.43□□□□□ -0.74
CDC7-203ENST00000428239 A2MP01023 1474 aa10.42□□□□□ -0.74
CDC7-203ENST00000428239 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
CDC7-203ENST00000428239 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
CDC7-203ENST00000428239 KANK1Q14678 1352 aa10.41□□□□□ -0.74
CDC7-203ENST00000428239 RICTORQ6R327 1708 aa10.4□□□□□ -0.74
CDC7-203ENST00000428239 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
CDC7-203ENST00000428239 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.74
CDC7-203ENST00000428239 FRMPD1Q5SYB0 1578 aa10.4□□□□□ -0.74
CDC7-203ENST00000428239 ARHGEF5Q12774 1597 aa10.4□□□□□ -0.75
CDC7-203ENST00000428239 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
CDC7-203ENST00000428239 ARHGEF40Q8TER5 1519 aa10.39□□□□□ -0.75
CDC7-203ENST00000428239 CEBPAP49715 358 aaPredicted RBP10.38□□□□□ -0.75
CDC7-203ENST00000428239 KDM5CP41229 1560 aa10.38□□□□□ -0.75
CDC7-203ENST00000428239 DNMT1P26358 1616 aaKnown RBP10.38□□□□□ -0.75
CDC7-203ENST00000428239 NCOA1Q15788 1441 aa10.38□□□□□ -0.75
CDC7-203ENST00000428239 PTPRKQ15262 1439 aa10.38□□□□□ -0.75
CDC7-203ENST00000428239 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
CDC7-203ENST00000428239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC7-203ENST00000428239 NUP155O75694 1391 aa10.36□□□□□ -0.75
CDC7-203ENST00000428239 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
CDC7-203ENST00000428239 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
CDC7-203ENST00000428239 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
CDC7-203ENST00000428239 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CDC7-203ENST00000428239 SLC4A1APQ9BWU0 796 aaKnown RBP10.36□□□□□ -0.75
CDC7-203ENST00000428239 ABCA6Q8N139 1617 aa10.36□□□□□ -0.75
CDC7-203ENST00000428239 KIDINS220Q9ULH0 1771 aa10.35□□□□□ -0.75
CDC7-203ENST00000428239 DUOX2Q9NRD8 1548 aa10.35□□□□□ -0.75
CDC7-203ENST00000428239 INO80Q9ULG1 1556 aaPredicted RBP10.34□□□□□ -0.75
CDC7-203ENST00000428239 ROCK1Q13464 1354 aa10.34□□□□□ -0.75
CDC7-203ENST00000428239 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
CDC7-203ENST00000428239 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
CDC7-203ENST00000428239 ERBINQ96RT1 1412 aa10.31□□□□□ -0.76
CDC7-203ENST00000428239 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms