RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
SMARCAL1-206ENST00000427645 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
SMARCAL1-206ENST00000427645 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-206ENST00000427645 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
SMARCAL1-206ENST00000427645 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
SMARCAL1-206ENST00000427645 BCORL1Q5H9F3 1711 aa12.78□□□□□ -0.36
SMARCAL1-206ENST00000427645 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.36
SMARCAL1-206ENST00000427645 FBXO41Q8TF61 875 aa12.77□□□□□ -0.37
SMARCAL1-206ENST00000427645 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
SMARCAL1-206ENST00000427645 KCNA4P22459 653 aa12.75□□□□□ -0.37
SMARCAL1-206ENST00000427645 ARHGEF40Q8TER5 1519 aa12.75□□□□□ -0.37
SMARCAL1-206ENST00000427645 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
SMARCAL1-206ENST00000427645 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-206ENST00000427645 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-206ENST00000427645 SCAPERQ9BY12 1400 aa12.74□□□□□ -0.37
SMARCAL1-206ENST00000427645 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
SMARCAL1-206ENST00000427645 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
SMARCAL1-206ENST00000427645 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
SMARCAL1-206ENST00000427645 CDK11AQ9UQ88 783 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-206ENST00000427645 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
SMARCAL1-206ENST00000427645 PLCH2O75038 1416 aa12.71□□□□□ -0.37
SMARCAL1-206ENST00000427645 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-206ENST00000427645 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
SMARCAL1-206ENST00000427645 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
SMARCAL1-206ENST00000427645 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
SMARCAL1-206ENST00000427645 ZMYM4Q5VZL5 1548 aa12.69□□□□□ -0.38
SMARCAL1-206ENST00000427645 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
SMARCAL1-206ENST00000427645 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
SMARCAL1-206ENST00000427645 AFAP1Q8N556 730 aa12.69□□□□□ -0.38
SMARCAL1-206ENST00000427645 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
SMARCAL1-206ENST00000427645 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
SMARCAL1-206ENST00000427645 MYT1LQ9UL68 1186 aa12.68□□□□□ -0.38
SMARCAL1-206ENST00000427645 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
SMARCAL1-206ENST00000427645 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
SMARCAL1-206ENST00000427645 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
SMARCAL1-206ENST00000427645 KIF14Q15058 1648 aa12.66□□□□□ -0.38
SMARCAL1-206ENST00000427645 LRRIQ1Q96JM4 1722 aa12.65□□□□□ -0.38
SMARCAL1-206ENST00000427645 MTUS2Q5JR59 1369 aa12.65□□□□□ -0.38
SMARCAL1-206ENST00000427645 ATP10AO60312 1499 aa12.65□□□□□ -0.38
SMARCAL1-206ENST00000427645 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
SMARCAL1-206ENST00000427645 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SMARCAL1-206ENST00000427645 ARHGAP5Q13017 1502 aa12.62□□□□□ -0.39
SMARCAL1-206ENST00000427645 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
SMARCAL1-206ENST00000427645 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
SMARCAL1-206ENST00000427645 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
SMARCAL1-206ENST00000427645 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
SMARCAL1-206ENST00000427645 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
SMARCAL1-206ENST00000427645 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
SMARCAL1-206ENST00000427645 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
SMARCAL1-206ENST00000427645 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
SMARCAL1-206ENST00000427645 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-206ENST00000427645 KDM5CP41229 1560 aa12.55□□□□□ -0.4
SMARCAL1-206ENST00000427645 DIP2CQ9Y2E4 1556 aa12.55□□□□□ -0.4
SMARCAL1-206ENST00000427645 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
SMARCAL1-206ENST00000427645 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
SMARCAL1-206ENST00000427645 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCAL1-206ENST00000427645 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.41
SMARCAL1-206ENST00000427645 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
SMARCAL1-206ENST00000427645 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-206ENST00000427645 ABCC1P33527 1531 aa12.51□□□□□ -0.41
SMARCAL1-206ENST00000427645 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
SMARCAL1-206ENST00000427645 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
SMARCAL1-206ENST00000427645 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
SMARCAL1-206ENST00000427645 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
SMARCAL1-206ENST00000427645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCAL1-206ENST00000427645 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
SMARCAL1-206ENST00000427645 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
SMARCAL1-206ENST00000427645 C3P01024 1663 aa12.47□□□□□ -0.41
SMARCAL1-206ENST00000427645 ITSN2Q9NZM3 1697 aa12.47□□□□□ -0.41
SMARCAL1-206ENST00000427645 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
SMARCAL1-206ENST00000427645 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-206ENST00000427645 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.41
SMARCAL1-206ENST00000427645 SPAG9O60271 1321 aaKnown RBP12.46□□□□□ -0.41
SMARCAL1-206ENST00000427645 AGLP35573 1532 aa12.46□□□□□ -0.42
SMARCAL1-206ENST00000427645 FGD6Q6ZV73 1430 aa12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 SAMD9LQ8IVG5 1584 aa12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 SYCP2Q9BX26 1530 aa12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
SMARCAL1-206ENST00000427645 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
SMARCAL1-206ENST00000427645 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
SMARCAL1-206ENST00000427645 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
SMARCAL1-206ENST00000427645 GGT6Q6P531 493 aa12.44□□□□□ -0.42
SMARCAL1-206ENST00000427645 ILDR2Q71H61 639 aa12.44□□□□□ -0.42
SMARCAL1-206ENST00000427645 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
SMARCAL1-206ENST00000427645 DISP3Q9P2K9 1392 aa12.43□□□□□ -0.42
SMARCAL1-206ENST00000427645 PTPRTO14522 1441 aa12.42□□□□□ -0.42
SMARCAL1-206ENST00000427645 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
SMARCAL1-206ENST00000427645 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
SMARCAL1-206ENST00000427645 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-206ENST00000427645 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
SMARCAL1-206ENST00000427645 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
SMARCAL1-206ENST00000427645 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
SMARCAL1-206ENST00000427645 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms