RNA–Protein interactions for RNA: ENST00000427314.6

RACGAP1-202, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,229 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-202ENST00000427314 MAGI2Q86UL8 1455 aa7.15□□□□□ -1.26
RACGAP1-202ENST00000427314 VSIG10Q8N0Z9 540 aa7.15□□□□□ -1.27
RACGAP1-202ENST00000427314 TTC37Q6PGP7 1564 aa7.15□□□□□ -1.27
RACGAP1-202ENST00000427314 FER1L4A9Z1Z3 1794 aa7.15□□□□□ -1.27
RACGAP1-202ENST00000427314 LOC105371045A0A1W2PR82 267 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 PLEKHG5O94827 1062 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 TRIM41Q8WV44 630 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 MYO5CQ9NQX4 1742 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 PCF11O94913 1555 aaKnown RBP7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 ITSN2Q9NZM3 1697 aa7.14□□□□□ -1.27
RACGAP1-202ENST00000427314 CARMIL2Q6F5E8 1435 aa7.13□□□□□ -1.27
RACGAP1-202ENST00000427314 PREX2Q70Z35 1606 aa7.13□□□□□ -1.27
RACGAP1-202ENST00000427314 AGLP35573 1532 aa7.13□□□□□ -1.27
RACGAP1-202ENST00000427314 PRG4Q92954 1404 aaPredicted RBP7.12□□□□□ -1.27
RACGAP1-202ENST00000427314 UACAQ9BZF9 1416 aa7.12□□□□□ -1.27
RACGAP1-202ENST00000427314 MAP3K1Q13233 1512 aa7.12□□□□□ -1.27
RACGAP1-202ENST00000427314 DCAF8L1A6NGE4 600 aa7.12□□□□□ -1.27
RACGAP1-202ENST00000427314 HECW1Q76N89 1606 aa7.12□□□□□ -1.27
RACGAP1-202ENST00000427314 FBLN2P98095 1184 aa7.11□□□□□ -1.27
RACGAP1-202ENST00000427314 TDRD9Q8NDG6 1382 aaKnown RBP7.11□□□□□ -1.27
RACGAP1-202ENST00000427314 IQSEC2Q5JU85 1478 aa7.11□□□□□ -1.27
RACGAP1-202ENST00000427314 ATXN8OSP0DMR3 200 aa7.1□□□□□ -1.27
RACGAP1-202ENST00000427314 FAM9AQ8IZU1 332 aaPredicted RBP7.1□□□□□ -1.27
RACGAP1-202ENST00000427314 MAST1Q9Y2H9 1570 aa7.09□□□□□ -1.27
RACGAP1-202ENST00000427314 ZC3H13Q5T200 1668 aaKnown RBP7.09□□□□□ -1.27
RACGAP1-202ENST00000427314 PLXNC1O60486 1568 aa7.08□□□□□ -1.28
RACGAP1-202ENST00000427314 MSH5O43196 834 aa7.08□□□□□ -1.28
RACGAP1-202ENST00000427314 EIF2AK4Q9P2K8 1649 aaKnown RBP7.08□□□□□ -1.28
RACGAP1-202ENST00000427314 ADGBQ8N7X0 1667 aa7.08□□□□□ -1.28
RACGAP1-202ENST00000427314 HOXD11P31277 338 aaPredicted RBP7.07□□□□□ -1.28
RACGAP1-202ENST00000427314 PREX1Q8TCU6 1659 aa7.07□□□□□ -1.28
RACGAP1-202ENST00000427314 FHOD3Q2V2M9 1422 aa7.07□□□□□ -1.28
RACGAP1-202ENST00000427314 TRIM26Q12899 539 aaPredicted RBP7.07□□□□□ -1.28
RACGAP1-202ENST00000427314 KDM2AQ9Y2K7 1162 aa7.06□□□□□ -1.28
RACGAP1-202ENST00000427314 CARMIL1Q5VZK9 1371 aa7.06□□□□□ -1.28
RACGAP1-202ENST00000427314 CDC42BPBQ9Y5S2 1711 aa7.06□□□□□ -1.28
RACGAP1-202ENST00000427314 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
RACGAP1-202ENST00000427314 INO80Q9ULG1 1556 aaPredicted RBP7.05□□□□□ -1.28
RACGAP1-202ENST00000427314 CDC42BPAQ5VT25 1732 aa7.05□□□□□ -1.28
RACGAP1-202ENST00000427314 CAMSAP2Q08AD1 1489 aa7.04□□□□□ -1.28
RACGAP1-202ENST00000427314 CFAP44Q96MT7 982 aa7.04□□□□□ -1.28
RACGAP1-202ENST00000427314 CCDC18Q5T9S5 1454 aa7.04□□□□□ -1.28
RACGAP1-202ENST00000427314 DMRT2Q9Y5R5 561 aa7.03□□□□□ -1.28
RACGAP1-202ENST00000427314 CROCC2H7BZ55 1655 aa7.03□□□□□ -1.28
RACGAP1-202ENST00000427314 RNF17Q9BXT8 1623 aaKnown RBP7.03□□□□□ -1.28
RACGAP1-202ENST00000427314 ASXL2Q76L83 1435 aa7.02□□□□□ -1.29
RACGAP1-202ENST00000427314 IFNLR1Q8IU57 520 aaPredicted RBP7.02□□□□□ -1.29
RACGAP1-202ENST00000427314 ARHGEF5Q12774 1597 aa7.02□□□□□ -1.29
RACGAP1-202ENST00000427314 BCL11AQ9H165 835 aa7.01□□□□□ -1.29
RACGAP1-202ENST00000427314 HECW2Q9P2P5 1572 aa7.01□□□□□ -1.29
RACGAP1-202ENST00000427314 SIGLEC1Q9BZZ2 1709 aa7.01□□□□□ -1.29
RACGAP1-202ENST00000427314 LMTK3Q96Q04 1460 aa7.01□□□□□ -1.29
RACGAP1-202ENST00000427314 NUP153P49790 1475 aaKnown RBP7□□□□□ -1.29
RACGAP1-202ENST00000427314 DEPDC5O75140 1603 aa7□□□□□ -1.29
RACGAP1-202ENST00000427314 PTPN23Q9H3S7 1636 aa7□□□□□ -1.29
RACGAP1-202ENST00000427314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7□□□□□ -1.29
RACGAP1-202ENST00000427314 PAXIP1Q6ZW49 1069 aaPredicted RBP7□□□□□ -1.29
RACGAP1-202ENST00000427314 KDM5DQ9BY66 1539 aa7□□□□□ -1.29
RACGAP1-202ENST00000427314 FYCO1Q9BQS8 1478 aa7□□□□□ -1.29
RACGAP1-202ENST00000427314 KIF14Q15058 1648 aa6.99□□□□□ -1.29
RACGAP1-202ENST00000427314 HRCP23327 699 aa6.99□□□□□ -1.29
RACGAP1-202ENST00000427314 VASPP50552 380 aaPredicted RBP6.99□□□□□ -1.29
RACGAP1-202ENST00000427314 ABCC1P33527 1531 aa6.99□□□□□ -1.29
RACGAP1-202ENST00000427314 PKD2Q13563 968 aa6.98□□□□□ -1.29
RACGAP1-202ENST00000427314 CHMP7Q8WUX9 453 aaPredicted RBP6.98□□□□□ -1.29
RACGAP1-202ENST00000427314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.98□□□□□ -1.295e-9■■□□□ 14.1
RACGAP1-202ENST00000427314 ATP10BO94823 1461 aa6.97□□□□□ -1.29
RACGAP1-202ENST00000427314 MLH3Q9UHC1 1453 aa6.97□□□□□ -1.29
RACGAP1-202ENST00000427314 PTPRGP23470 1445 aa6.97□□□□□ -1.29
RACGAP1-202ENST00000427314 SPDYE4A6NLX3 237 aa6.97□□□□□ -1.29
RACGAP1-202ENST00000427314 JPH4Q96JJ6 628 aa6.96□□□□□ -1.29
RACGAP1-202ENST00000427314 KIDINS220Q9ULH0 1771 aa6.96□□□□□ -1.3
RACGAP1-202ENST00000427314 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
RACGAP1-202ENST00000427314 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
RACGAP1-202ENST00000427314 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
RACGAP1-202ENST00000427314 POLR1AO95602 1720 aaPredicted RBP6.94□□□□□ -1.3
RACGAP1-202ENST00000427314 NPM1P06748 294 aaKnown RBP eCLIP6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 CASKIN1Q8WXD9 1431 aa6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 ABCA6Q8N139 1617 aa6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 FMN1Q68DA7 1419 aa6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 KIAA1107Q9UPP5 1409 aa6.93□□□□□ -1.3
RACGAP1-202ENST00000427314 PLEKHH2Q8IVE3 1493 aa6.92□□□□□ -1.3
RACGAP1-202ENST00000427314 C3P01024 1663 aa6.92□□□□□ -1.3
RACGAP1-202ENST00000427314 NCOA2Q15596 1464 aa6.92□□□□□ -1.3
RACGAP1-202ENST00000427314 NEURL4Q96JN8 1562 aa6.92□□□□□ -1.3
RACGAP1-202ENST00000427314 ZFYVE16Q7Z3T8 1539 aa6.92□□□□□ -1.3
RACGAP1-202ENST00000427314 EHBP1L1Q8N3D4 1523 aa6.91□□□□□ -1.3
RACGAP1-202ENST00000427314 TSHZ2Q9NRE2 1034 aa6.91□□□□□ -1.3
RACGAP1-202ENST00000427314 VWDEQ8N2E2 1590 aa6.91□□□□□ -1.3
RACGAP1-202ENST00000427314 STRCQ7RTU9 1775 aa6.91□□□□□ -1.3
RACGAP1-202ENST00000427314 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.3
RACGAP1-202ENST00000427314 SYNMO15061 1565 aa6.9□□□□□ -1.3
RACGAP1-202ENST00000427314 PLCH2O75038 1416 aa6.9□□□□□ -1.3
RACGAP1-202ENST00000427314 RTEL1-TNFRSF6BF6WH68 1400 aa6.9□□□□□ -1.31
RACGAP1-202ENST00000427314 NPATQ14207 1427 aa6.9□□□□□ -1.31
RACGAP1-202ENST00000427314 ADGRL1O94910 1474 aa6.9□□□□□ -1.31
RACGAP1-202ENST00000427314 U3KPZ7 1027 aaPredicted RBP6.89□□□□□ -1.31
RACGAP1-202ENST00000427314 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms