RNA–Protein interactions for RNA: ENST00000426918.2

RABGAP1-204, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 5

Gene RABGAP1, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-204ENST00000426918 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
RABGAP1-204ENST00000426918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.135e-8■■■□□ 18.5
RABGAP1-204ENST00000426918 G3V3G9 751 aa7.98□□□□□ -1.13
RABGAP1-204ENST00000426918 PSEN1P49768 467 aa7.97□□□□□ -1.13
RABGAP1-204ENST00000426918 PDCD7Q8N8D1 485 aaKnown RBP7.97□□□□□ -1.13
RABGAP1-204ENST00000426918 RNF25Q96BH1 459 aaPredicted RBP7.97□□□□□ -1.13
RABGAP1-204ENST00000426918 EMP3P54852 163 aa7.96□□□□□ -1.14
RABGAP1-204ENST00000426918 NKX1-1Q15270 411 aaPredicted RBP7.96□□□□□ -1.14
RABGAP1-204ENST00000426918 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
RABGAP1-204ENST00000426918 CHRM1P11229 460 aaPredicted RBP7.94□□□□□ -1.14
RABGAP1-204ENST00000426918 HS6ST3Q8IZP7 471 aa7.94□□□□□ -1.14
RABGAP1-204ENST00000426918 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
RABGAP1-204ENST00000426918 PDAP1Q13442 181 aaKnown RBP7.93□□□□□ -1.14
RABGAP1-204ENST00000426918 SPNS2Q8IVW8 549 aa7.93□□□□□ -1.14
RABGAP1-204ENST00000426918 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
RABGAP1-204ENST00000426918 GTF3C3Q9Y5Q9 886 aa7.92□□□□□ -1.14
RABGAP1-204ENST00000426918 GTPBP6O43824 516 aaPredicted RBP7.9□□□□□ -1.14
RABGAP1-204ENST00000426918 CABP2Q9NPB3 220 aa7.9□□□□□ -1.14
RABGAP1-204ENST00000426918 NBR1Q14596 966 aa7.89□□□□□ -1.15
RABGAP1-204ENST00000426918 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
RABGAP1-204ENST00000426918 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
RABGAP1-204ENST00000426918 HS3ST6Q96QI5 342 aa7.87□□□□□ -1.15
RABGAP1-204ENST00000426918 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
RABGAP1-204ENST00000426918 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
RABGAP1-204ENST00000426918 DCAF1Q9Y4B6 1507 aa7.84□□□□□ -1.15
RABGAP1-204ENST00000426918 DPY19L2Q6NUT2 758 aa7.84□□□□□ -1.15
RABGAP1-204ENST00000426918 NESP48681 1621 aa7.83□□□□□ -1.16
RABGAP1-204ENST00000426918 ZCCHC6Q5VYS8 1495 aaKnown RBP7.82□□□□□ -1.16
RABGAP1-204ENST00000426918 ILDR1Q86SU0 546 aaPredicted RBP7.81□□□□□ -1.16
RABGAP1-204ENST00000426918 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
RABGAP1-204ENST00000426918 SMARCA2P51531 1590 aa7.8□□□□□ -1.16
RABGAP1-204ENST00000426918 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
RABGAP1-204ENST00000426918 TMEM132AQ24JP5 1023 aa7.78□□□□□ -1.16
RABGAP1-204ENST00000426918 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
RABGAP1-204ENST00000426918 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
RABGAP1-204ENST00000426918 ERBB3P21860 1342 aa7.78□□□□□ -1.16
RABGAP1-204ENST00000426918 BAZ1AQ9NRL2 1556 aaPredicted RBP7.77□□□□□ -1.17
RABGAP1-204ENST00000426918 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
RABGAP1-204ENST00000426918 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
RABGAP1-204ENST00000426918 ARXQ96QS3 562 aa7.76□□□□□ -1.17
RABGAP1-204ENST00000426918 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
RABGAP1-204ENST00000426918 HOXB3P14651 431 aaPredicted RBP7.75□□□□□ -1.17
RABGAP1-204ENST00000426918 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
RABGAP1-204ENST00000426918 EFCAB3Q8N7B9 438 aa7.75□□□□□ -1.17
RABGAP1-204ENST00000426918 KIF21AQ7Z4S6 1674 aa7.75□□□□□ -1.17
RABGAP1-204ENST00000426918 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
RABGAP1-204ENST00000426918 RIMBP3CA6NJZ7 1639 aa7.71□□□□□ -1.17
RABGAP1-204ENST00000426918 RIMBP3BA6NNM3 1639 aa7.71□□□□□ -1.17
RABGAP1-204ENST00000426918 RIMBP3Q9UFD9 1639 aa7.71□□□□□ -1.17
RABGAP1-204ENST00000426918 VARS2Q5ST30 1063 aaKnown RBP7.7□□□□□ -1.18
RABGAP1-204ENST00000426918 DAXXQ9UER7 740 aaPredicted RBP7.7□□□□□ -1.18
RABGAP1-204ENST00000426918 HMGXB3Q12766 1538 aa7.69□□□□□ -1.18
RABGAP1-204ENST00000426918 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
RABGAP1-204ENST00000426918 MICALL2Q8IY33 904 aa7.69□□□□□ -1.18
RABGAP1-204ENST00000426918 ATAD2BQ9ULI0 1458 aa7.68□□□□□ -1.18
RABGAP1-204ENST00000426918 STK25O00506 426 aa7.68□□□□□ -1.18
RABGAP1-204ENST00000426918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
RABGAP1-204ENST00000426918 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
RABGAP1-204ENST00000426918 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
RABGAP1-204ENST00000426918 VGFO15240 615 aaPredicted RBP7.67□□□□□ -1.18
RABGAP1-204ENST00000426918 SOX12O15370 315 aa7.67□□□□□ -1.18
RABGAP1-204ENST00000426918 ZSWIM6Q9HCJ5 1215 aa7.67□□□□□ -1.18
RABGAP1-204ENST00000426918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.65□□□□□ -1.18
RABGAP1-204ENST00000426918 ZFP91Q96JP5 570 aaPredicted RBP7.65□□□□□ -1.18
RABGAP1-204ENST00000426918 PDS5BQ9NTI5 1447 aa7.64□□□□□ -1.19
RABGAP1-204ENST00000426918 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
RABGAP1-204ENST00000426918 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
RABGAP1-204ENST00000426918 BCL11BQ9C0K0 894 aaPredicted RBP7.64□□□□□ -1.19
RABGAP1-204ENST00000426918 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
RABGAP1-204ENST00000426918 WDR62O43379 1518 aa7.63□□□□□ -1.19
RABGAP1-204ENST00000426918 MRC2Q9UBG0 1479 aa7.63□□□□□ -1.19
RABGAP1-204ENST00000426918 BRPF1P55201 1214 aaPredicted RBP7.63□□□□□ -1.19
RABGAP1-204ENST00000426918 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
RABGAP1-204ENST00000426918 ARHGEF11O15085 1522 aa7.62□□□□□ -1.19
RABGAP1-204ENST00000426918 LMOD2Q6P5Q4 547 aa7.62□□□□□ -1.19
RABGAP1-204ENST00000426918 TMEM92Q6UXU6 159 aa7.62□□□□□ -1.19
RABGAP1-204ENST00000426918 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
RABGAP1-204ENST00000426918 STK24Q9Y6E0 443 aa7.61□□□□□ -1.19
RABGAP1-204ENST00000426918 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
RABGAP1-204ENST00000426918 MS4A4AQ96JQ5 239 aa7.6□□□□□ -1.19
RABGAP1-204ENST00000426918 BAZ1BQ9UIG0 1483 aaKnown RBP7.6□□□□□ -1.19
RABGAP1-204ENST00000426918 PTGER2P43116 358 aa7.59□□□□□ -1.19
RABGAP1-204ENST00000426918 NLRP6P59044 892 aa7.59□□□□□ -1.19
RABGAP1-204ENST00000426918 GPR153Q6NV75 609 aa7.59□□□□□ -1.19
RABGAP1-204ENST00000426918 ARSIQ5FYB1 569 aa7.58□□□□□ -1.2
RABGAP1-204ENST00000426918 SMARCA4P51532 1647 aa7.58□□□□□ -1.2
RABGAP1-204ENST00000426918 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
RABGAP1-204ENST00000426918 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
RABGAP1-204ENST00000426918 P3H3Q8IVL6 736 aa7.55□□□□□ -1.2
RABGAP1-204ENST00000426918 ZNF316A6NFI3 1004 aaPredicted RBP7.54□□□□□ -1.2
RABGAP1-204ENST00000426918 CYB5RLQ6IPT4 315 aa7.54□□□□□ -1.2
RABGAP1-204ENST00000426918 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
RABGAP1-204ENST00000426918 ARAP1Q96P48 1450 aa7.53□□□□□ -1.2
RABGAP1-204ENST00000426918 KHSRPQ92945 711 aaKnown RBP eCLIP7.52□□□□□ -1.211e-6■■□□□ 12
RABGAP1-204ENST00000426918 CEP164Q9UPV0 1460 aa7.51□□□□□ -1.21
RABGAP1-204ENST00000426918 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
RABGAP1-204ENST00000426918 RYDENQ9NUL5 291 aaKnown RBP7.51□□□□□ -1.21
RABGAP1-204ENST00000426918 CADPSQ9ULU8 1353 aa7.49□□□□□ -1.21
RABGAP1-204ENST00000426918 SUPT5HO00267 1087 aaKnown RBP7.49□□□□□ -1.21
RABGAP1-204ENST00000426918 NUDT7P0C024 238 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms