RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 GCC2Q8IWJ2 1684 aa33.99■■■■□ 3.03
RUNDC3A-202ENST00000426726 CLSPNQ9HAW4 1339 aa33.98■■■■□ 3.03
RUNDC3A-202ENST00000426726 CDC42BPBQ9Y5S2 1711 aa33.97■■■■□ 3.03
RUNDC3A-202ENST00000426726 MYO5CQ9NQX4 1742 aa33.97■■■■□ 3.03
RUNDC3A-202ENST00000426726 ZNF644Q9H582 1327 aaPredicted RBP33.97■■■■□ 3.03
RUNDC3A-202ENST00000426726 ABCC5O15440 1437 aa33.95■■■■□ 3.03
RUNDC3A-202ENST00000426726 NAIPQ13075 1403 aa33.95■■■■□ 3.03
RUNDC3A-202ENST00000426726 CROCC2H7BZ55 1655 aa33.95■■■■□ 3.02
RUNDC3A-202ENST00000426726 WDR7Q9Y4E6 1490 aa33.93■■■■□ 3.02
RUNDC3A-202ENST00000426726 ROCK1Q13464 1354 aa33.91■■■■□ 3.02
RUNDC3A-202ENST00000426726 ZNF777Q9ULD5 760 aaPredicted RBP33.88■■■■□ 3.01
RUNDC3A-202ENST00000426726 ADGBQ8N7X0 1667 aa33.88■■■■□ 3.01
RUNDC3A-202ENST00000426726 SAMD9LQ8IVG5 1584 aa33.86■■■■□ 3.01
RUNDC3A-202ENST00000426726 ARHGAP5Q13017 1502 aa33.85■■■■□ 3.01
RUNDC3A-202ENST00000426726 ARHGEF5Q12774 1597 aa33.85■■■■□ 3.01
RUNDC3A-202ENST00000426726 KCNH8Q96L42 1107 aa33.83■■■■□ 3.01
RUNDC3A-202ENST00000426726 CHIC2Q9UKJ5 165 aa33.83■■■■□ 3.01
RUNDC3A-202ENST00000426726 SHANK2Q9UPX8 1470 aa33.83■■■■□ 3.01
RUNDC3A-202ENST00000426726 ASXL2Q76L83 1435 aa33.81■■■■□ 3
RUNDC3A-202ENST00000426726 RIMBP3CA6NJZ7 1639 aa33.8■■■■□ 3
RUNDC3A-202ENST00000426726 RIMBP3BA6NNM3 1639 aa33.8■■■■□ 3
RUNDC3A-202ENST00000426726 RIMBP3Q9UFD9 1639 aa33.8■■■■□ 3
RUNDC3A-202ENST00000426726 ADGRL2O95490 1459 aa33.8■■■■□ 3
RUNDC3A-202ENST00000426726 ARAP3Q8WWN8 1544 aa33.8■■■■□ 3
RUNDC3A-202ENST00000426726 PLCH2O75038 1416 aa33.79■■■■□ 3
RUNDC3A-202ENST00000426726 NPM1P06748 294 aaKnown RBP eCLIP33.79■■■■□ 3
RUNDC3A-202ENST00000426726 RRP7BPQ9NSQ0 103 aa33.77■■■■□ 3
RUNDC3A-202ENST00000426726 PLEKHH2Q8IVE3 1493 aa33.77■■■■□ 3
RUNDC3A-202ENST00000426726 ABCA9Q8IUA7 1624 aa33.77■■■■□ 3
RUNDC3A-202ENST00000426726 MBD5Q9P267 1494 aa33.74■■■□□ 2.99
RUNDC3A-202ENST00000426726 MAPKBP1O60336 1514 aa33.74■■■□□ 2.99
RUNDC3A-202ENST00000426726 CCDC141Q6ZP82 1450 aa33.72■■■□□ 2.99
RUNDC3A-202ENST00000426726 SYCP2Q9BX26 1530 aa33.7■■■□□ 2.99
RUNDC3A-202ENST00000426726 KIAA1107Q9UPP5 1409 aa33.7■■■□□ 2.99
RUNDC3A-202ENST00000426726 ACIN1Q9UKV3 1341 aaKnown RBP33.7■■■□□ 2.99
RUNDC3A-202ENST00000426726 NCOA1Q15788 1441 aa33.69■■■□□ 2.98
RUNDC3A-202ENST00000426726 RSPH4AQ5TD94 716 aa33.69■■■□□ 2.98
RUNDC3A-202ENST00000426726 C9orf84Q5VXU9 1444 aa33.69■■■□□ 2.98
RUNDC3A-202ENST00000426726 KDM6BO15054 1643 aa33.68■■■□□ 2.98
RUNDC3A-202ENST00000426726 ANKRD30AQ9BXX3 1397 aa33.68■■■□□ 2.98
RUNDC3A-202ENST00000426726 EFCAB2Q5VUJ9 269 aa33.64■■■□□ 2.98
RUNDC3A-202ENST00000426726 ABCC1P33527 1531 aa33.64■■■□□ 2.98
RUNDC3A-202ENST00000426726 MAST1Q9Y2H9 1570 aa33.63■■■□□ 2.97
RUNDC3A-202ENST00000426726 HNRNPMP52272 730 aaKnown RBP eCLIP33.63■■■□□ 2.97
RUNDC3A-202ENST00000426726 TSPY4P0CV99 314 aa33.62■■■□□ 2.97
RUNDC3A-202ENST00000426726 TSPY10P0CW01 314 aa33.62■■■□□ 2.97
RUNDC3A-202ENST00000426726 CYB5RLQ6IPT4 315 aa33.54■■■□□ 2.96
RUNDC3A-202ENST00000426726 ARHGEF12Q9NZN5 1544 aa33.54■■■□□ 2.96
RUNDC3A-202ENST00000426726 FANCAO15360 1455 aa33.53■■■□□ 2.96
RUNDC3A-202ENST00000426726 PLXNC1O60486 1568 aa33.5■■■□□ 2.95
RUNDC3A-202ENST00000426726 ANKRD50Q9ULJ7 1429 aa33.49■■■□□ 2.95
RUNDC3A-202ENST00000426726 KIF15Q9NS87 1388 aa33.47■■■□□ 2.95
RUNDC3A-202ENST00000426726 CFAP74Q9C0B2 1584 aa33.47■■■□□ 2.95
RUNDC3A-202ENST00000426726 TRIM52Q96A61 297 aa33.46■■■□□ 2.95
RUNDC3A-202ENST00000426726 CD109Q6YHK3 1445 aa33.41■■■□□ 2.94
RUNDC3A-202ENST00000426726 TRAPPC8Q9Y2L5 1435 aa33.4■■■□□ 2.94
RUNDC3A-202ENST00000426726 DENND4BO75064 1496 aaPredicted RBP33.39■■■□□ 2.94
RUNDC3A-202ENST00000426726 ADGRL1O94910 1474 aa33.39■■■□□ 2.94
RUNDC3A-202ENST00000426726 GLI2P10070 1586 aa33.35■■■□□ 2.93
RUNDC3A-202ENST00000426726 MPHOSPH9Q99550 1183 aa33.35■■■□□ 2.93
RUNDC3A-202ENST00000426726 RTEL1-TNFRSF6BF6WH68 1400 aa33.34■■■□□ 2.93
RUNDC3A-202ENST00000426726 KDM5DQ9BY66 1539 aa33.33■■■□□ 2.93
RUNDC3A-202ENST00000426726 DUOX2Q9NRD8 1548 aa33.33■■■□□ 2.93
RUNDC3A-202ENST00000426726 ZFYVE16Q7Z3T8 1539 aa33.32■■■□□ 2.92
RUNDC3A-202ENST00000426726 PZPP20742 1482 aa33.32■■■□□ 2.92
RUNDC3A-202ENST00000426726 MAP3K4Q9Y6R4 1608 aa33.32■■■□□ 2.92
RUNDC3A-202ENST00000426726 TIMELESSQ9UNS1 1208 aa33.31■■■□□ 2.92
RUNDC3A-202ENST00000426726 SCAPERQ9BY12 1400 aa33.31■■■□□ 2.92
RUNDC3A-202ENST00000426726 INO80Q9ULG1 1556 aaPredicted RBP33.3■■■□□ 2.92
RUNDC3A-202ENST00000426726 SIN3AQ96ST3 1273 aa33.29■■■□□ 2.92
RUNDC3A-202ENST00000426726 SPAG9O60271 1321 aaKnown RBP33.27■■■□□ 2.92
RUNDC3A-202ENST00000426726 ERBINQ96RT1 1412 aa33.26■■■□□ 2.91
RUNDC3A-202ENST00000426726 NEO1Q92859 1461 aa33.26■■■□□ 2.91
RUNDC3A-202ENST00000426726 ATP7AQ04656 1500 aa33.24■■■□□ 2.91
RUNDC3A-202ENST00000426726 UNC13BO14795 1591 aa33.24■■■□□ 2.91
RUNDC3A-202ENST00000426726 DIP2BQ9P265 1576 aa33.24■■■□□ 2.91
RUNDC3A-202ENST00000426726 SLC4A1APQ9BWU0 796 aaKnown RBP33.24■■■□□ 2.91
RUNDC3A-202ENST00000426726 NEUROD1Q13562 356 aa33.23■■■□□ 2.91
RUNDC3A-202ENST00000426726 ZNF518AQ6AHZ1 1483 aa33.23■■■□□ 2.91
RUNDC3A-202ENST00000426726 AFAP1Q8N556 730 aa33.22■■■□□ 2.91
RUNDC3A-202ENST00000426726 NUP155O75694 1391 aa33.19■■■□□ 2.9
RUNDC3A-202ENST00000426726 KDM5CP41229 1560 aa33.17■■■□□ 2.9
RUNDC3A-202ENST00000426726 POGZQ7Z3K3 1410 aa33.16■■■□□ 2.9
RUNDC3A-202ENST00000426726 ANKRD30BQ9BXX2 1392 aa33.15■■■□□ 2.9
RUNDC3A-202ENST00000426726 TONSLQ96HA7 1378 aa33.14■■■□□ 2.9
RUNDC3A-202ENST00000426726 MAGI2Q86UL8 1455 aa33.13■■■□□ 2.89
RUNDC3A-202ENST00000426726 FAM135AQ9P2D6 1515 aa33.11■■■□□ 2.89
RUNDC3A-202ENST00000426726 KIDINS220Q9ULH0 1771 aa33.11■■■□□ 2.89
RUNDC3A-202ENST00000426726 IQGAP3Q86VI3 1631 aa33.1■■■□□ 2.89
RUNDC3A-202ENST00000426726 FOXD1Q16676 465 aa33.07■■■□□ 2.89
RUNDC3A-202ENST00000426726 EIF2AK4Q9P2K8 1649 aaKnown RBP33.07■■■□□ 2.88
RUNDC3A-202ENST00000426726 HECW2Q9P2P5 1572 aa33.07■■■□□ 2.88
RUNDC3A-202ENST00000426726 RPRD2Q5VT52 1461 aaKnown RBP33.06■■■□□ 2.88
RUNDC3A-202ENST00000426726 MLH3Q9UHC1 1453 aa33.05■■■□□ 2.88
RUNDC3A-202ENST00000426726 FAM69CQ0P6D2 419 aa33.05■■■□□ 2.88
RUNDC3A-202ENST00000426726 PKD2Q13563 968 aa33.05■■■□□ 2.88
RUNDC3A-202ENST00000426726 ZNF316A6NFI3 1004 aaPredicted RBP33.04■■■□□ 2.88
RUNDC3A-202ENST00000426726 DEPDC5O75140 1603 aa33.03■■■□□ 2.88
RUNDC3A-202ENST00000426726 DNAJC5Q9H3Z4 198 aa33.01■■■□□ 2.88
RUNDC3A-202ENST00000426726 RICTORQ6R327 1708 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms