RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
ARHGEF28-203ENST00000426542 ISY1Q9ULR0 285 aaKnown RBP22.85■■□□□ 1.25
ARHGEF28-203ENST00000426542 DRC7Q8IY82 874 aa22.84■■□□□ 1.25
ARHGEF28-203ENST00000426542 HSPA5P11021 654 aaKnown RBP22.83■■□□□ 1.25
ARHGEF28-203ENST00000426542 CHAF1AQ13111 956 aaPredicted RBP22.83■■□□□ 1.24
ARHGEF28-203ENST00000426542 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
ARHGEF28-203ENST00000426542 MSNP26038 577 aaKnown RBP22.8■■□□□ 1.24
ARHGEF28-203ENST00000426542 GGT6Q6P531 493 aa22.8■■□□□ 1.24
ARHGEF28-203ENST00000426542 GNL2Q13823 731 aaKnown RBP22.8■■□□□ 1.24
ARHGEF28-203ENST00000426542 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
ARHGEF28-203ENST00000426542 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
ARHGEF28-203ENST00000426542 CFAP44Q96MT7 982 aa22.78■■□□□ 1.24
ARHGEF28-203ENST00000426542 L1TD1Q5T7N2 865 aaKnown RBP22.78■■□□□ 1.24
ARHGEF28-203ENST00000426542 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 PKD2Q13563 968 aa22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 IPO8O15397 1037 aaKnown RBP22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 FOXD1Q16676 465 aa22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 NCBP3Q53F19 620 aaKnown RBP22.76■■□□□ 1.23
ARHGEF28-203ENST00000426542 CUX2O14529 1486 aa22.75■■□□□ 1.23
ARHGEF28-203ENST00000426542 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
ARHGEF28-203ENST00000426542 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
ARHGEF28-203ENST00000426542 NACADO15069 1562 aa22.73■■□□□ 1.23
ARHGEF28-203ENST00000426542 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
ARHGEF28-203ENST00000426542 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
ARHGEF28-203ENST00000426542 TIMELESSQ9UNS1 1208 aa22.72■■□□□ 1.23
ARHGEF28-203ENST00000426542 ZNF330Q9Y3S2 320 aaPredicted RBP22.72■■□□□ 1.23
ARHGEF28-203ENST00000426542 U2AF1L5P0DN76 240 aaPredicted RBP22.71■■□□□ 1.23
ARHGEF28-203ENST00000426542 U2AF1Q01081 240 aaKnown RBP eCLIP22.71■■□□□ 1.237e-6■■■□□ 19.2
ARHGEF28-203ENST00000426542 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
ARHGEF28-203ENST00000426542 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
ARHGEF28-203ENST00000426542 CALD1Q05682 793 aaKnown RBP22.67■■□□□ 1.22
ARHGEF28-203ENST00000426542 DEKP35659 375 aaKnown RBP22.66■■□□□ 1.22
ARHGEF28-203ENST00000426542 RCAN3Q9UKA8 241 aa22.66■■□□□ 1.22
ARHGEF28-203ENST00000426542 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF28-203ENST00000426542 SOGA1O94964 1423 aa22.65■■□□□ 1.22
ARHGEF28-203ENST00000426542 GBP4Q96PP9 640 aa22.64■■□□□ 1.21
ARHGEF28-203ENST00000426542 RBM19Q9Y4C8 960 aaKnown RBP22.64■■□□□ 1.21
ARHGEF28-203ENST00000426542 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
ARHGEF28-203ENST00000426542 RALBP1Q15311 655 aa22.61■■□□□ 1.21
ARHGEF28-203ENST00000426542 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF28-203ENST00000426542 SLKQ9H2G2 1235 aaPredicted RBP22.59■■□□□ 1.21
ARHGEF28-203ENST00000426542 PTMSP20962 102 aa22.59■■□□□ 1.21
ARHGEF28-203ENST00000426542 KIAA2012Q0VF49 1180 aa22.59■■□□□ 1.21
ARHGEF28-203ENST00000426542 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.21
ARHGEF28-203ENST00000426542 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.21
ARHGEF28-203ENST00000426542 NUP155O75694 1391 aa22.57■■□□□ 1.2
ARHGEF28-203ENST00000426542 GORABQ5T7V8 394 aa22.57■■□□□ 1.2
ARHGEF28-203ENST00000426542 STK31Q9BXU1 1019 aa22.57■■□□□ 1.2
ARHGEF28-203ENST00000426542 SPAG9O60271 1321 aaKnown RBP22.56■■□□□ 1.2
ARHGEF28-203ENST00000426542 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF28-203ENST00000426542 MFAP1P55081 439 aaKnown RBP22.56■■□□□ 1.2
ARHGEF28-203ENST00000426542 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
ARHGEF28-203ENST00000426542 HTATSF1O43719 755 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-203ENST00000426542 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
ARHGEF28-203ENST00000426542 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
ARHGEF28-203ENST00000426542 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
ARHGEF28-203ENST00000426542 TRIM6-TRIM34B2RNG4 842 aa22.54■■□□□ 1.2
ARHGEF28-203ENST00000426542 HSP90B1P14625 803 aaKnown RBP22.53■■□□□ 1.2
ARHGEF28-203ENST00000426542 GPATCH3Q96I76 525 aa22.53■■□□□ 1.2
ARHGEF28-203ENST00000426542 TAF7LQ5H9L4 462 aa22.53■■□□□ 1.2
ARHGEF28-203ENST00000426542 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
ARHGEF28-203ENST00000426542 TCERG1O14776 1098 aaKnown RBP22.51■■□□□ 1.19
ARHGEF28-203ENST00000426542 TMX4Q9H1E5 349 aaPredicted RBP22.51■■□□□ 1.19
ARHGEF28-203ENST00000426542 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
ARHGEF28-203ENST00000426542 CCDC9Q9Y3X0 531 aaKnown RBP22.51■■□□□ 1.19
ARHGEF28-203ENST00000426542 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
ARHGEF28-203ENST00000426542 SYAP1Q96A49 352 aaPredicted RBP22.5■■□□□ 1.19
ARHGEF28-203ENST00000426542 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
ARHGEF28-203ENST00000426542 SLC4A10Q6U841 1118 aa22.5■■□□□ 1.19
ARHGEF28-203ENST00000426542 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
ARHGEF28-203ENST00000426542 AMER1Q5JTC6 1135 aaPredicted RBP22.48■■□□□ 1.19
ARHGEF28-203ENST00000426542 NOC3LQ8WTT2 800 aaKnown RBP22.48■■□□□ 1.19
ARHGEF28-203ENST00000426542 EFCAB2Q5VUJ9 269 aa22.48■■□□□ 1.19
ARHGEF28-203ENST00000426542 TPM4P67936 248 aa22.48■■□□□ 1.19
ARHGEF28-203ENST00000426542 CHMP4AQ9BY43 222 aa22.47■■□□□ 1.19
ARHGEF28-203ENST00000426542 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
ARHGEF28-203ENST00000426542 TERF2IPQ9NYB0 399 aa22.47■■□□□ 1.19
ARHGEF28-203ENST00000426542 HMMRO75330 724 aa22.47■■□□□ 1.19
ARHGEF28-203ENST00000426542 NOL8Q76FK4 1167 aaKnown RBP22.46■■□□□ 1.19
ARHGEF28-203ENST00000426542 CLUAP1Q96AJ1 413 aa22.46■■□□□ 1.19
ARHGEF28-203ENST00000426542 ARID3AQ99856 593 aa22.46■■□□□ 1.19
ARHGEF28-203ENST00000426542 KIF3BO15066 747 aa22.45■■□□□ 1.18
ARHGEF28-203ENST00000426542 FOXD4L1Q9NU39 408 aa22.44■■□□□ 1.18
ARHGEF28-203ENST00000426542 NGDNQ8NEJ9 315 aaKnown RBP22.42■■□□□ 1.18
ARHGEF28-203ENST00000426542 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
ARHGEF28-203ENST00000426542 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.189e-7■■■□□ 17.7
ARHGEF28-203ENST00000426542 HDAC5Q9UQL6 1122 aa22.41■■□□□ 1.18
ARHGEF28-203ENST00000426542 CENPJQ9HC77 1338 aaPredicted RBP22.41■■□□□ 1.18
ARHGEF28-203ENST00000426542 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
ARHGEF28-203ENST00000426542 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
ARHGEF28-203ENST00000426542 AMPHP49418 695 aa22.4■■□□□ 1.18
ARHGEF28-203ENST00000426542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.4■■□□□ 1.186e-7■■■□□ 17.7
ARHGEF28-203ENST00000426542 RASSF8Q8NHQ8 419 aa22.4■■□□□ 1.18
ARHGEF28-203ENST00000426542 GOLGA6L3A6NEY3 463 aa22.39■■□□□ 1.17
ARHGEF28-203ENST00000426542 G3V3G9 751 aa22.39■■□□□ 1.17
ARHGEF28-203ENST00000426542 DCAF8Q5TAQ9 597 aa22.39■■□□□ 1.17
ARHGEF28-203ENST00000426542 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
ARHGEF28-203ENST00000426542 CSPP1Q1MSJ5 1256 aa22.38■■□□□ 1.17
ARHGEF28-203ENST00000426542 CCDC34Q96HJ3 373 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms