RNA–Protein interactions for RNA: ENST00000426304.5

NHEJ1-204, Transcript of non-homologous end joining factor 1, human

TSL 3

Gene NHEJ1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NHEJ1-204	ENST00000426304	RICTOR	Q6R327	1708 aa		13.3	□□□□□ -0.28
NHEJ1-204	ENST00000426304	RAPGEF3	O95398	923 aa		13.3	□□□□□ -0.28
NHEJ1-204	ENST00000426304	P3H3	Q8IVL6	736 aa		13.3	□□□□□ -0.28
NHEJ1-204	ENST00000426304	FHOD3	Q2V2M9	1422 aa		13.3	□□□□□ -0.28
NHEJ1-204	ENST00000426304	DENND4B	O75064	1496 aa	Predicted RBP	13.29	□□□□□ -0.28
NHEJ1-204	ENST00000426304	ZMYM4	Q5VZL5	1548 aa		13.29	□□□□□ -0.28
NHEJ1-204	ENST00000426304	ARID3C	A6NKF2	412 aa		13.29	□□□□□ -0.28
NHEJ1-204	ENST00000426304	LMTK3	Q96Q04	1460 aa		13.29	□□□□□ -0.28
NHEJ1-204	ENST00000426304	POGZ	Q7Z3K3	1410 aa		13.28	□□□□□ -0.28
NHEJ1-204	ENST00000426304	EFCAB5	A4FU69	1503 aa		13.28	□□□□□ -0.28
NHEJ1-204	ENST00000426304	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.27	□□□□□ -0.29
NHEJ1-204	ENST00000426304	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.27	□□□□□ -0.29
NHEJ1-204	ENST00000426304	FANCA	O15360	1455 aa		13.27	□□□□□ -0.29
NHEJ1-204	ENST00000426304	MAGI2	Q86UL8	1455 aa		13.27	□□□□□ -0.29
NHEJ1-204	ENST00000426304	RIMS1	Q86UR5	1692 aa	Known RBP	13.27	□□□□□ -0.29
NHEJ1-204	ENST00000426304	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.26	□□□□□ -0.29
NHEJ1-204	ENST00000426304	AKNA	Q7Z591	1439 aa		13.26	□□□□□ -0.29
NHEJ1-204	ENST00000426304	PLEKHD1	A6NEE1	506 aa		13.25	□□□□□ -0.29
NHEJ1-204	ENST00000426304	ZFYVE16	Q7Z3T8	1539 aa		13.24	□□□□□ -0.29
NHEJ1-204	ENST00000426304	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
NHEJ1-204	ENST00000426304	TTC37	Q6PGP7	1564 aa		13.22	□□□□□ -0.29
NHEJ1-204	ENST00000426304	FER1L4	A9Z1Z3	1794 aa		13.19	□□□□□ -0.3
NHEJ1-204	ENST00000426304	HECW1	Q76N89	1606 aa		13.18	□□□□□ -0.3
NHEJ1-204	ENST00000426304	PLCH2	O75038	1416 aa		13.17	□□□□□ -0.3
NHEJ1-204	ENST00000426304	SIGLEC1	Q9BZZ2	1709 aa		13.16	□□□□□ -0.3
NHEJ1-204	ENST00000426304	YEATS2	Q9ULM3	1422 aa		13.16	□□□□□ -0.3
NHEJ1-204	ENST00000426304	C9orf84	Q5VXU9	1444 aa		13.15	□□□□□ -0.3
NHEJ1-204	ENST00000426304	ARHGEF12	Q9NZN5	1544 aa		13.15	□□□□□ -0.3
NHEJ1-204	ENST00000426304	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.15	□□□□□ -0.3
NHEJ1-204	ENST00000426304	MYO5C	Q9NQX4	1742 aa		13.15	□□□□□ -0.3
NHEJ1-204	ENST00000426304	PREX1	Q8TCU6	1659 aa		13.14	□□□□□ -0.31
NHEJ1-204	ENST00000426304	FMN1	Q68DA7	1419 aa		13.13	□□□□□ -0.31
NHEJ1-204	ENST00000426304	SCAPER	Q9BY12	1400 aa		13.13	□□□□□ -0.31
NHEJ1-204	ENST00000426304	CDK13	Q14004	1512 aa	Known RBP	13.13	□□□□□ -0.31
NHEJ1-204	ENST00000426304	ATP10A	O60312	1499 aa		13.13	□□□□□ -0.31
NHEJ1-204	ENST00000426304	ZNF518A	Q6AHZ1	1483 aa		13.11	□□□□□ -0.31
NHEJ1-204	ENST00000426304	KDM5C	P41229	1560 aa		13.11	□□□□□ -0.31
NHEJ1-204	ENST00000426304	KIF14	Q15058	1648 aa		13.1	□□□□□ -0.31
NHEJ1-204	ENST00000426304	RANGAP1	P46060	587 aa	Predicted RBP	13.1	□□□□□ -0.31
NHEJ1-204	ENST00000426304	HSPA2	P54652	639 aa		13.1	□□□□□ -0.31
NHEJ1-204	ENST00000426304	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.1	□□□□□ -0.31
NHEJ1-204	ENST00000426304	RERE	Q9P2R6	1566 aa		13.1	□□□□□ -0.31
NHEJ1-204	ENST00000426304	EFCAB2	Q5VUJ9	269 aa		13.09	□□□□□ -0.31
NHEJ1-204	ENST00000426304	CERK	Q8TCT0	537 aa		13.09	□□□□□ -0.31
NHEJ1-204	ENST00000426304	CLIP1	P30622	1438 aa		13.07	□□□□□ -0.32
NHEJ1-204	ENST00000426304	SETD1B	Q9UPS6	1966 aa	Known RBP	13.07	□□□□□ -0.32
NHEJ1-204	ENST00000426304	TRO	Q12816	1431 aa	Predicted RBP	13.06	□□□□□ -0.32
NHEJ1-204	ENST00000426304	MLEC	Q14165	292 aa		13.06	□□□□□ -0.32
NHEJ1-204	ENST00000426304	UHRF1BP1	Q6BDS2	1440 aa		13.05	□□□□□ -0.32
NHEJ1-204	ENST00000426304	ARHGAP5	Q13017	1502 aa		13.05	□□□□□ -0.32
NHEJ1-204	ENST00000426304	ARHGAP35	Q9NRY4	1499 aa		13.04	□□□□□ -0.32
NHEJ1-204	ENST00000426304	DIP2C	Q9Y2E4	1556 aa		13.04	□□□□□ -0.32
NHEJ1-204	ENST00000426304	MLH3	Q9UHC1	1453 aa		13.04	□□□□□ -0.32
NHEJ1-204	ENST00000426304	AGL	P35573	1532 aa		13.03	□□□□□ -0.32
NHEJ1-204	ENST00000426304	STRC	Q7RTU9	1775 aa		13.02	□□□□□ -0.32
NHEJ1-204	ENST00000426304	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.02	□□□□□ -0.33
NHEJ1-204	ENST00000426304	PREX2	Q70Z35	1606 aa		13.01	□□□□□ -0.33
NHEJ1-204	ENST00000426304	ABCA6	Q8N139	1617 aa		13.01	□□□□□ -0.33
NHEJ1-204	ENST00000426304	CDC42BPB	Q9Y5S2	1711 aa		13	□□□□□ -0.33
NHEJ1-204	ENST00000426304	ABCC1	P33527	1531 aa		13	□□□□□ -0.33
NHEJ1-204	ENST00000426304	CCDC18	Q5T9S5	1454 aa		13	□□□□□ -0.33
NHEJ1-204	ENST00000426304	PTPRT	O14522	1441 aa		13	□□□□□ -0.33
NHEJ1-204	ENST00000426304	C3	P01024	1663 aa		12.99	□□□□□ -0.33
NHEJ1-204	ENST00000426304	CNTLN	Q9NXG0	1405 aa		12.99	□□□□□ -0.33
NHEJ1-204	ENST00000426304	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
NHEJ1-204	ENST00000426304	LRRIQ1	Q96JM4	1722 aa		12.99	□□□□□ -0.33
NHEJ1-204	ENST00000426304	ITSN2	Q9NZM3	1697 aa		12.99	□□□□□ -0.33
NHEJ1-204	ENST00000426304	IQSEC2	Q5JU85	1478 aa		12.98	□□□□□ -0.33
NHEJ1-204	ENST00000426304	UBTF	P17480	764 aa	Known RBP	12.98	□□□□□ -0.33
NHEJ1-204	ENST00000426304	AFAP1	Q8N556	730 aa		12.97	□□□□□ -0.33
NHEJ1-204	ENST00000426304	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.97	□□□□□ -0.33
NHEJ1-204	ENST00000426304	CEBPA	P49715	358 aa	Predicted RBP	12.96	□□□□□ -0.33
NHEJ1-204	ENST00000426304	TRAPPC8	Q9Y2L5	1435 aa		12.96	□□□□□ -0.34
NHEJ1-204	ENST00000426304	MROH2A	A6NES4	1674 aa		12.96	□□□□□ -0.34
NHEJ1-204	ENST00000426304	CASKIN1	Q8WXD9	1431 aa		12.95	□□□□□ -0.34
NHEJ1-204	ENST00000426304	KIDINS220	Q9ULH0	1771 aa		12.94	□□□□□ -0.34
NHEJ1-204	ENST00000426304	ESF1	Q9H501	851 aa	Known RBP	12.94	□□□□□ -0.34
NHEJ1-204	ENST00000426304	MYT1L	Q9UL68	1186 aa		12.94	□□□□□ -0.34
NHEJ1-204	ENST00000426304	NPAT	Q14207	1427 aa		12.93	□□□□□ -0.34
NHEJ1-204	ENST00000426304	NCOA1	Q15788	1441 aa		12.93	□□□□□ -0.34
NHEJ1-204	ENST00000426304	CDC42BPA	Q5VT25	1732 aa		12.93	□□□□□ -0.34
NHEJ1-204	ENST00000426304	LTBP4	Q8N2S1	1624 aa		12.91	□□□□□ -0.34
NHEJ1-204	ENST00000426304	DCAF8L1	A6NGE4	600 aa		12.91	□□□□□ -0.34
NHEJ1-204	ENST00000426304	DISP3	Q9P2K9	1392 aa		12.91	□□□□□ -0.34
NHEJ1-204	ENST00000426304	FYCO1	Q9BQS8	1478 aa		12.91	□□□□□ -0.34
NHEJ1-204	ENST00000426304	SPATA31D1	Q6ZQQ2	1576 aa		12.9	□□□□□ -0.34
NHEJ1-204	ENST00000426304	SAMD9L	Q8IVG5	1584 aa		12.9	□□□□□ -0.34
NHEJ1-204	ENST00000426304	PLCB2	Q00722	1185 aa		12.9	□□□□□ -0.34
NHEJ1-204	ENST00000426304		U3KPZ7	1027 aa	Predicted RBP	12.9	□□□□□ -0.34
NHEJ1-204	ENST00000426304	FBXO3	Q9UK99	471 aa		12.89	□□□□□ -0.35
NHEJ1-204	ENST00000426304	PLEKHH2	Q8IVE3	1493 aa		12.88	□□□□□ -0.35
NHEJ1-204	ENST00000426304	ZNF142	P52746	1687 aa	Predicted RBP	12.88	□□□□□ -0.35
NHEJ1-204	ENST00000426304	PLXNC1	O60486	1568 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	PLA2R1	Q13018	1463 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	SOCS7	O14512	581 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	CAMSAP1	Q5T5Y3	1602 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	SYCP2	Q9BX26	1530 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	KIAA1107	Q9UPP5	1409 aa		12.87	□□□□□ -0.35
NHEJ1-204	ENST00000426304	ATP7A	Q04656	1500 aa		12.86	□□□□□ -0.35
NHEJ1-204	ENST00000426304	INO80	Q9ULG1	1556 aa	Predicted RBP	12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms