RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
LRCH3-203ENST00000425562 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
LRCH3-203ENST00000425562 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
LRCH3-203ENST00000425562 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-203ENST00000425562 CCDC136Q96JN2 1154 aa18.38■□□□□ 0.53
LRCH3-203ENST00000425562 UGGT2Q9NYU1 1516 aa18.38■□□□□ 0.53
LRCH3-203ENST00000425562 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
LRCH3-203ENST00000425562 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
LRCH3-203ENST00000425562 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
LRCH3-203ENST00000425562 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
LRCH3-203ENST00000425562 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
LRCH3-203ENST00000425562 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-203ENST00000425562 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-203ENST00000425562 KDM5BQ9UGL1 1544 aa18.34■□□□□ 0.53
LRCH3-203ENST00000425562 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
LRCH3-203ENST00000425562 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.53
LRCH3-203ENST00000425562 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
LRCH3-203ENST00000425562 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
LRCH3-203ENST00000425562 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
LRCH3-203ENST00000425562 FBLN2P98095 1184 aa18.32■□□□□ 0.52
LRCH3-203ENST00000425562 ZBTB47Q9UFB7 747 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-203ENST00000425562 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-203ENST00000425562 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
LRCH3-203ENST00000425562 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
LRCH3-203ENST00000425562 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
LRCH3-203ENST00000425562 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
LRCH3-203ENST00000425562 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
LRCH3-203ENST00000425562 HECW1Q76N89 1606 aa18.28■□□□□ 0.52
LRCH3-203ENST00000425562 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
LRCH3-203ENST00000425562 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
LRCH3-203ENST00000425562 IPO9Q96P70 1041 aaKnown RBP18.25■□□□□ 0.51
LRCH3-203ENST00000425562 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
LRCH3-203ENST00000425562 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
LRCH3-203ENST00000425562 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
LRCH3-203ENST00000425562 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
LRCH3-203ENST00000425562 TCOF1Q13428 1488 aaKnown RBP18.23■□□□□ 0.51
LRCH3-203ENST00000425562 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
LRCH3-203ENST00000425562 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
LRCH3-203ENST00000425562 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
LRCH3-203ENST00000425562 WDR62O43379 1518 aa18.21■□□□□ 0.51
LRCH3-203ENST00000425562 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
LRCH3-203ENST00000425562 DAPK1P53355 1430 aa18.19■□□□□ 0.5
LRCH3-203ENST00000425562 ABCC5O15440 1437 aa18.18■□□□□ 0.5
LRCH3-203ENST00000425562 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-203ENST00000425562 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-203ENST00000425562 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
LRCH3-203ENST00000425562 NEFMP07197 916 aa18.16■□□□□ 0.5
LRCH3-203ENST00000425562 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
LRCH3-203ENST00000425562 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
LRCH3-203ENST00000425562 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
LRCH3-203ENST00000425562 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-203ENST00000425562 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
LRCH3-203ENST00000425562 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
LRCH3-203ENST00000425562 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
LRCH3-203ENST00000425562 TMC1Q8TDI8 760 aa18.12■□□□□ 0.49
LRCH3-203ENST00000425562 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
LRCH3-203ENST00000425562 PKD2Q13563 968 aa18.1■□□□□ 0.49
LRCH3-203ENST00000425562 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
LRCH3-203ENST00000425562 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
LRCH3-203ENST00000425562 NCOA1Q15788 1441 aa18.09■□□□□ 0.49
LRCH3-203ENST00000425562 KIAA0556O60303 1618 aa18.08■□□□□ 0.49
LRCH3-203ENST00000425562 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
LRCH3-203ENST00000425562 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
LRCH3-203ENST00000425562 PLIN1O60240 522 aa18.06■□□□□ 0.48
LRCH3-203ENST00000425562 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
LRCH3-203ENST00000425562 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
LRCH3-203ENST00000425562 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
LRCH3-203ENST00000425562 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
LRCH3-203ENST00000425562 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
LRCH3-203ENST00000425562 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
LRCH3-203ENST00000425562 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
LRCH3-203ENST00000425562 ROCK1Q13464 1354 aa18.03■□□□□ 0.48
LRCH3-203ENST00000425562 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
LRCH3-203ENST00000425562 PDE4AP27815 886 aa18.03■□□□□ 0.48
LRCH3-203ENST00000425562 KIF14Q15058 1648 aa18.02■□□□□ 0.48
LRCH3-203ENST00000425562 PZPP20742 1482 aa18.01■□□□□ 0.47
LRCH3-203ENST00000425562 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
LRCH3-203ENST00000425562 ERCC6Q03468 1493 aa18■□□□□ 0.47
LRCH3-203ENST00000425562 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
LRCH3-203ENST00000425562 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
LRCH3-203ENST00000425562 EIF5BO60841 1220 aaKnown RBP17.99■□□□□ 0.47
LRCH3-203ENST00000425562 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
LRCH3-203ENST00000425562 USP47Q96K76 1375 aa17.99■□□□□ 0.47
LRCH3-203ENST00000425562 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
LRCH3-203ENST00000425562 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
LRCH3-203ENST00000425562 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
LRCH3-203ENST00000425562 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
LRCH3-203ENST00000425562 NUP155O75694 1391 aa17.97■□□□□ 0.47
LRCH3-203ENST00000425562 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
LRCH3-203ENST00000425562 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
LRCH3-203ENST00000425562 CARD11Q9BXL7 1154 aa17.95■□□□□ 0.46
LRCH3-203ENST00000425562 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
LRCH3-203ENST00000425562 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
LRCH3-203ENST00000425562 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
LRCH3-203ENST00000425562 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
LRCH3-203ENST00000425562 ANKRD30AQ9BXX3 1397 aa17.93■□□□□ 0.46
LRCH3-203ENST00000425562 ANKRD50Q9ULJ7 1429 aa17.93■□□□□ 0.46
LRCH3-203ENST00000425562 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
LRCH3-203ENST00000425562 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
LRCH3-203ENST00000425562 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms