RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 MLECQ14165 292 aa25.19■■□□□ 1.62
HDAC11-210ENST00000425430 SCAPERQ9BY12 1400 aa25.19■■□□□ 1.62
HDAC11-210ENST00000425430 MYO5CQ9NQX4 1742 aa25.18■■□□□ 1.62
HDAC11-210ENST00000425430 HSPA2P54652 639 aa25.18■■□□□ 1.62
HDAC11-210ENST00000425430 ATP1B4Q9UN42 357 aaPredicted RBP25.18■■□□□ 1.62
HDAC11-210ENST00000425430 PLCH2O75038 1416 aa25.17■■□□□ 1.62
HDAC11-210ENST00000425430 FMN1Q68DA7 1419 aa25.13■■□□□ 1.61
HDAC11-210ENST00000425430 UBTFP17480 764 aaKnown RBP25.12■■□□□ 1.61
HDAC11-210ENST00000425430 KIF14Q15058 1648 aa25.12■■□□□ 1.61
HDAC11-210ENST00000425430 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
HDAC11-210ENST00000425430 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
HDAC11-210ENST00000425430 ATP10AO60312 1499 aa25.09■■□□□ 1.61
HDAC11-210ENST00000425430 ARHGEF12Q9NZN5 1544 aa25.07■■□□□ 1.6
HDAC11-210ENST00000425430 EFCAB2Q5VUJ9 269 aa25.07■■□□□ 1.6
HDAC11-210ENST00000425430 ARHGAP5Q13017 1502 aa25.06■■□□□ 1.6
HDAC11-210ENST00000425430 CDK11AQ9UQ88 783 aaPredicted RBP25.05■■□□□ 1.6
HDAC11-210ENST00000425430 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
HDAC11-210ENST00000425430 ZNF518AQ6AHZ1 1483 aa25.03■■□□□ 1.6
HDAC11-210ENST00000425430 CLIP1P30622 1438 aa25.03■■□□□ 1.6
HDAC11-210ENST00000425430 TROQ12816 1431 aaPredicted RBP25.03■■□□□ 1.6
HDAC11-210ENST00000425430 LRRIQ1Q96JM4 1722 aa25.01■■□□□ 1.59
HDAC11-210ENST00000425430 KDM5CP41229 1560 aa25■■□□□ 1.59
HDAC11-210ENST00000425430 MYT1LQ9UL68 1186 aa24.99■■□□□ 1.59
HDAC11-210ENST00000425430 CEBPAP49715 358 aaPredicted RBP24.96■■□□□ 1.59
HDAC11-210ENST00000425430 DIP2CQ9Y2E4 1556 aa24.96■■□□□ 1.59
HDAC11-210ENST00000425430 AFAP1Q8N556 730 aa24.95■■□□□ 1.58
HDAC11-210ENST00000425430 CERKQ8TCT0 537 aa24.95■■□□□ 1.58
HDAC11-210ENST00000425430 CDC42BPBQ9Y5S2 1711 aa24.93■■□□□ 1.58
HDAC11-210ENST00000425430 ABCA6Q8N139 1617 aa24.93■■□□□ 1.58
HDAC11-210ENST00000425430 PREX2Q70Z35 1606 aa24.91■■□□□ 1.58
HDAC11-210ENST00000425430 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
HDAC11-210ENST00000425430 UHRF1BP1Q6BDS2 1440 aa24.89■■□□□ 1.58
HDAC11-210ENST00000425430 ABCC1P33527 1531 aa24.89■■□□□ 1.57
HDAC11-210ENST00000425430 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
HDAC11-210ENST00000425430 STRCQ7RTU9 1775 aa24.86■■□□□ 1.57
HDAC11-210ENST00000425430 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
HDAC11-210ENST00000425430 C3P01024 1663 aa24.85■■□□□ 1.57
HDAC11-210ENST00000425430 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
HDAC11-210ENST00000425430 TRAPPC8Q9Y2L5 1435 aa24.84■■□□□ 1.57
HDAC11-210ENST00000425430 CASKIN1Q8WXD9 1431 aa24.82■■□□□ 1.56
HDAC11-210ENST00000425430 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
HDAC11-210ENST00000425430 SETD1BQ9UPS6 1966 aaKnown RBP24.8■■□□□ 1.56
HDAC11-210ENST00000425430 ESF1Q9H501 851 aaKnown RBP24.8■■□□□ 1.56
HDAC11-210ENST00000425430 AGLP35573 1532 aa24.8■■□□□ 1.56
HDAC11-210ENST00000425430 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
HDAC11-210ENST00000425430 KIDINS220Q9ULH0 1771 aa24.78■■□□□ 1.56
HDAC11-210ENST00000425430 FYCO1Q9BQS8 1478 aa24.74■■□□□ 1.55
HDAC11-210ENST00000425430 SAMD9LQ8IVG5 1584 aa24.72■■□□□ 1.55
HDAC11-210ENST00000425430 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
HDAC11-210ENST00000425430 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
HDAC11-210ENST00000425430 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
HDAC11-210ENST00000425430 PTPRTO14522 1441 aa24.69■■□□□ 1.54
HDAC11-210ENST00000425430 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
HDAC11-210ENST00000425430 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
HDAC11-210ENST00000425430 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
HDAC11-210ENST00000425430 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.53
HDAC11-210ENST00000425430 SPAG9O60271 1321 aaKnown RBP24.63■■□□□ 1.53
HDAC11-210ENST00000425430 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
HDAC11-210ENST00000425430 ATP7AQ04656 1500 aa24.62■■□□□ 1.53
HDAC11-210ENST00000425430 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
HDAC11-210ENST00000425430 NPATQ14207 1427 aa24.61■■□□□ 1.53
HDAC11-210ENST00000425430 CLTCQ00610 1675 aaKnown RBP24.6■■□□□ 1.53
HDAC11-210ENST00000425430 INO80Q9ULG1 1556 aaPredicted RBP24.6■■□□□ 1.53
HDAC11-210ENST00000425430 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
HDAC11-210ENST00000425430 HNRNPMP52272 730 aaKnown RBP eCLIP24.6■■□□□ 1.53
HDAC11-210ENST00000425430 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
HDAC11-210ENST00000425430 PLXNC1O60486 1568 aa24.58■■□□□ 1.52
HDAC11-210ENST00000425430 PLEKHH2Q8IVE3 1493 aa24.57■■□□□ 1.52
HDAC11-210ENST00000425430 ZMYM3Q14202 1370 aa24.56■■□□□ 1.52
HDAC11-210ENST00000425430 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-210ENST00000425430 MYO3AQ8NEV4 1616 aa24.56■■□□□ 1.52
HDAC11-210ENST00000425430 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
HDAC11-210ENST00000425430 A2MP01023 1474 aa24.55■■□□□ 1.52
HDAC11-210ENST00000425430 SPATA31D1Q6ZQQ2 1576 aa24.54■■□□□ 1.52
HDAC11-210ENST00000425430 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
HDAC11-210ENST00000425430 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
HDAC11-210ENST00000425430 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
HDAC11-210ENST00000425430 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
HDAC11-210ENST00000425430 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
HDAC11-210ENST00000425430 ILDR2Q71H61 639 aa24.5■■□□□ 1.51
HDAC11-210ENST00000425430 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
HDAC11-210ENST00000425430 ADGBQ8N7X0 1667 aa24.5■■□□□ 1.51
HDAC11-210ENST00000425430 NCKAP5LQ9HCH0 1330 aa24.49■■□□□ 1.51
HDAC11-210ENST00000425430 TIAM1Q13009 1591 aa24.48■■□□□ 1.51
HDAC11-210ENST00000425430 GGT6Q6P531 493 aa24.48■■□□□ 1.51
HDAC11-210ENST00000425430 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
HDAC11-210ENST00000425430 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.5
HDAC11-210ENST00000425430 PLA2R1Q13018 1463 aa24.45■■□□□ 1.5
HDAC11-210ENST00000425430 ZNF335Q9H4Z2 1342 aaPredicted RBP24.44■■□□□ 1.5
HDAC11-210ENST00000425430 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
HDAC11-210ENST00000425430 TCOF1Q13428 1488 aaKnown RBP24.4■■□□□ 1.5
HDAC11-210ENST00000425430 PKD2Q13563 968 aa24.4■■□□□ 1.5
HDAC11-210ENST00000425430 SOCS7O14512 581 aa24.39■■□□□ 1.49
HDAC11-210ENST00000425430 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
HDAC11-210ENST00000425430 UBAP1LF5GYI3 381 aa24.36■■□□□ 1.49
HDAC11-210ENST00000425430 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
HDAC11-210ENST00000425430 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
HDAC11-210ENST00000425430 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
HDAC11-210ENST00000425430 RTEL1-TNFRSF6BF6WH68 1400 aa24.34■■□□□ 1.49
HDAC11-210ENST00000425430 POLR1AO95602 1720 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms