RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
SCN2A-204ENST00000424833 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
SCN2A-204ENST00000424833 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
SCN2A-204ENST00000424833 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
SCN2A-204ENST00000424833 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
SCN2A-204ENST00000424833 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 KDM5BQ9UGL1 1544 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 NEUROD1Q13562 356 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 MIER1Q8N108 512 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
SCN2A-204ENST00000424833 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
SCN2A-204ENST00000424833 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
SCN2A-204ENST00000424833 CROCC2H7BZ55 1655 aa12.02□□□□□ -0.48
SCN2A-204ENST00000424833 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
SCN2A-204ENST00000424833 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
SCN2A-204ENST00000424833 PTPRGP23470 1445 aa12.01□□□□□ -0.49
SCN2A-204ENST00000424833 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
SCN2A-204ENST00000424833 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
SCN2A-204ENST00000424833 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
SCN2A-204ENST00000424833 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
SCN2A-204ENST00000424833 PPP1R15AO75807 674 aaPredicted RBP11.98□□□□□ -0.49
SCN2A-204ENST00000424833 ADGRL2O95490 1459 aa11.98□□□□□ -0.49
SCN2A-204ENST00000424833 CFDP1Q9UEE9 299 aaPredicted RBP11.97□□□□□ -0.49
SCN2A-204ENST00000424833 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
SCN2A-204ENST00000424833 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
SCN2A-204ENST00000424833 PLEKHD1A6NEE1 506 aa11.95□□□□□ -0.5
SCN2A-204ENST00000424833 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
SCN2A-204ENST00000424833 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
SCN2A-204ENST00000424833 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
SCN2A-204ENST00000424833 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
SCN2A-204ENST00000424833 TTC37Q6PGP7 1564 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 PZPP20742 1482 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
SCN2A-204ENST00000424833 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
SCN2A-204ENST00000424833 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
SCN2A-204ENST00000424833 ERICH6Q7L0X2 663 aa11.91□□□□□ -0.5
SCN2A-204ENST00000424833 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
SCN2A-204ENST00000424833 ARHGEF5Q12774 1597 aa11.91□□□□□ -0.5
SCN2A-204ENST00000424833 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SCN2A-204ENST00000424833 ANKRD30BQ9BXX2 1392 aa11.9□□□□□ -0.5
SCN2A-204ENST00000424833 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
SCN2A-204ENST00000424833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCN2A-204ENST00000424833 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
SCN2A-204ENST00000424833 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
SCN2A-204ENST00000424833 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
SCN2A-204ENST00000424833 TEX14Q8IWB6 1497 aa11.87□□□□□ -0.51
SCN2A-204ENST00000424833 YTHDC1Q96MU7 727 aaKnown RBP11.87□□□□□ -0.51
SCN2A-204ENST00000424833 ANKRD30AQ9BXX3 1397 aa11.87□□□□□ -0.51
SCN2A-204ENST00000424833 UHRF1BP1LA0JNW5 1464 aa11.87□□□□□ -0.51
SCN2A-204ENST00000424833 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
SCN2A-204ENST00000424833 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
SCN2A-204ENST00000424833 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
SCN2A-204ENST00000424833 SYCP2Q9BX26 1530 aa11.85□□□□□ -0.51
SCN2A-204ENST00000424833 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
SCN2A-204ENST00000424833 MYO5CQ9NQX4 1742 aa11.84□□□□□ -0.51
SCN2A-204ENST00000424833 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
SCN2A-204ENST00000424833 HNRNPMP52272 730 aaKnown RBP eCLIP11.83□□□□□ -0.51
SCN2A-204ENST00000424833 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
SCN2A-204ENST00000424833 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
SCN2A-204ENST00000424833 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
SCN2A-204ENST00000424833 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
SCN2A-204ENST00000424833 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
SCN2A-204ENST00000424833 KIF15Q9NS87 1388 aa11.81□□□□□ -0.52
SCN2A-204ENST00000424833 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
SCN2A-204ENST00000424833 ARHGEF12Q9NZN5 1544 aa11.8□□□□□ -0.52
SCN2A-204ENST00000424833 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
SCN2A-204ENST00000424833 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
SCN2A-204ENST00000424833 PLCH2O75038 1416 aa11.77□□□□□ -0.53
SCN2A-204ENST00000424833 TSPY4P0CV99 314 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 TSPY10P0CW01 314 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 PKD2Q13563 968 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 ABCC1P33527 1531 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 UNC13BO14795 1591 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 NUP155O75694 1391 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
SCN2A-204ENST00000424833 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
SCN2A-204ENST00000424833 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
SCN2A-204ENST00000424833 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
SCN2A-204ENST00000424833 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
SCN2A-204ENST00000424833 ARAP3Q8WWN8 1544 aa11.73□□□□□ -0.53
SCN2A-204ENST00000424833 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
SCN2A-204ENST00000424833 WASHC2AQ641Q2 1341 aa11.72□□□□□ -0.53
SCN2A-204ENST00000424833 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
SCN2A-204ENST00000424833 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
SCN2A-204ENST00000424833 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.53
SCN2A-204ENST00000424833 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
SCN2A-204ENST00000424833 ABCA9Q8IUA7 1624 aa11.7□□□□□ -0.54
SCN2A-204ENST00000424833 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
SCN2A-204ENST00000424833 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
SCN2A-204ENST00000424833 C11orf95C9JLR9 678 aaPredicted RBP11.69□□□□□ -0.54
SCN2A-204ENST00000424833 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
SCN2A-204ENST00000424833 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
SCN2A-204ENST00000424833 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
SCN2A-204ENST00000424833 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
SCN2A-204ENST00000424833 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms