RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 MLECQ14165 292 aa19.55■□□□□ 0.72
PLOD3-204ENST00000424135 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
PLOD3-204ENST00000424135 SCAPERQ9BY12 1400 aa19.55■□□□□ 0.72
PLOD3-204ENST00000424135 POGZQ7Z3K3 1410 aa19.53■□□□□ 0.72
PLOD3-204ENST00000424135 KIF14Q15058 1648 aa19.51■□□□□ 0.71
PLOD3-204ENST00000424135 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
PLOD3-204ENST00000424135 MAGI2Q86UL8 1455 aa19.49■□□□□ 0.71
PLOD3-204ENST00000424135 FMN1Q68DA7 1419 aa19.48■□□□□ 0.71
PLOD3-204ENST00000424135 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
PLOD3-204ENST00000424135 ATP10AO60312 1499 aa19.44■□□□□ 0.7
PLOD3-204ENST00000424135 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
PLOD3-204ENST00000424135 LRRIQ1Q96JM4 1722 aa19.44■□□□□ 0.7
PLOD3-204ENST00000424135 TROQ12816 1431 aaPredicted RBP19.43■□□□□ 0.7
PLOD3-204ENST00000424135 MYO5CQ9NQX4 1742 aa19.43■□□□□ 0.7
PLOD3-204ENST00000424135 CEBPAP49715 358 aaPredicted RBP19.43■□□□□ 0.7
PLOD3-204ENST00000424135 ARHGEF12Q9NZN5 1544 aa19.42■□□□□ 0.7
PLOD3-204ENST00000424135 FER1L4A9Z1Z3 1794 aa19.42■□□□□ 0.7
PLOD3-204ENST00000424135 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
PLOD3-204ENST00000424135 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
PLOD3-204ENST00000424135 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.69
PLOD3-204ENST00000424135 KDM5CP41229 1560 aa19.36■□□□□ 0.69
PLOD3-204ENST00000424135 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
PLOD3-204ENST00000424135 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
PLOD3-204ENST00000424135 DIP2CQ9Y2E4 1556 aa19.33■□□□□ 0.69
PLOD3-204ENST00000424135 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
PLOD3-204ENST00000424135 CLIP1P30622 1438 aa19.33■□□□□ 0.68
PLOD3-204ENST00000424135 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
PLOD3-204ENST00000424135 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
PLOD3-204ENST00000424135 ABCA6Q8N139 1617 aa19.3■□□□□ 0.68
PLOD3-204ENST00000424135 CERKQ8TCT0 537 aa19.3■□□□□ 0.68
PLOD3-204ENST00000424135 ABCC1P33527 1531 aa19.28■□□□□ 0.68
PLOD3-204ENST00000424135 MLH3Q9UHC1 1453 aa19.28■□□□□ 0.68
PLOD3-204ENST00000424135 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
PLOD3-204ENST00000424135 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.67
PLOD3-204ENST00000424135 REREQ9P2R6 1566 aa19.25■□□□□ 0.67
PLOD3-204ENST00000424135 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
PLOD3-204ENST00000424135 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
PLOD3-204ENST00000424135 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
PLOD3-204ENST00000424135 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
PLOD3-204ENST00000424135 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
PLOD3-204ENST00000424135 UHRF1BP1Q6BDS2 1440 aa19.21■□□□□ 0.67
PLOD3-204ENST00000424135 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
PLOD3-204ENST00000424135 C3P01024 1663 aa19.2■□□□□ 0.66
PLOD3-204ENST00000424135 AGLP35573 1532 aa19.2■□□□□ 0.66
PLOD3-204ENST00000424135 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
PLOD3-204ENST00000424135 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
PLOD3-204ENST00000424135 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
PLOD3-204ENST00000424135 SAMD9LQ8IVG5 1584 aa19.18■□□□□ 0.66
PLOD3-204ENST00000424135 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
PLOD3-204ENST00000424135 SETD1BQ9UPS6 1966 aaKnown RBP19.14■□□□□ 0.65
PLOD3-204ENST00000424135 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
PLOD3-204ENST00000424135 SPAG9O60271 1321 aaKnown RBP19.12■□□□□ 0.65
PLOD3-204ENST00000424135 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
PLOD3-204ENST00000424135 PTPRTO14522 1441 aa19.09■□□□□ 0.65
PLOD3-204ENST00000424135 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
PLOD3-204ENST00000424135 ZNF644Q9H582 1327 aaPredicted RBP19.08■□□□□ 0.65
PLOD3-204ENST00000424135 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.64
PLOD3-204ENST00000424135 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
PLOD3-204ENST00000424135 ZMYM3Q14202 1370 aa19.07■□□□□ 0.64
PLOD3-204ENST00000424135 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
PLOD3-204ENST00000424135 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 SOCS7O14512 581 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 ILDR2Q71H61 639 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 LTBP4Q8N2S1 1624 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
PLOD3-204ENST00000424135 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
PLOD3-204ENST00000424135 PLXNC1O60486 1568 aa19.04■□□□□ 0.64
PLOD3-204ENST00000424135 A2MP01023 1474 aa19.03■□□□□ 0.64
PLOD3-204ENST00000424135 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
PLOD3-204ENST00000424135 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
PLOD3-204ENST00000424135 NPATQ14207 1427 aa19.02■□□□□ 0.64
PLOD3-204ENST00000424135 CAMSAP1Q5T5Y3 1602 aa19.02■□□□□ 0.64
PLOD3-204ENST00000424135 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
PLOD3-204ENST00000424135 CLTCQ00610 1675 aaKnown RBP19.01■□□□□ 0.63
PLOD3-204ENST00000424135 GGT6Q6P531 493 aa19.01■□□□□ 0.63
PLOD3-204ENST00000424135 PLEKHH2Q8IVE3 1493 aa19■□□□□ 0.63
PLOD3-204ENST00000424135 MBD5Q9P267 1494 aa19■□□□□ 0.63
PLOD3-204ENST00000424135 TIAM1Q13009 1591 aa19■□□□□ 0.63
PLOD3-204ENST00000424135 PTPRKQ15262 1439 aa19■□□□□ 0.63
PLOD3-204ENST00000424135 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
PLOD3-204ENST00000424135 ZNF335Q9H4Z2 1342 aaPredicted RBP18.96■□□□□ 0.63
PLOD3-204ENST00000424135 MYO3AQ8NEV4 1616 aa18.95■□□□□ 0.62
PLOD3-204ENST00000424135 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
PLOD3-204ENST00000424135 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
PLOD3-204ENST00000424135 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
PLOD3-204ENST00000424135 ZNF142P52746 1687 aaPredicted RBP18.91■□□□□ 0.62
PLOD3-204ENST00000424135 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
PLOD3-204ENST00000424135 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
PLOD3-204ENST00000424135 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
PLOD3-204ENST00000424135 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
PLOD3-204ENST00000424135 PLA2R1Q13018 1463 aa18.89■□□□□ 0.61
PLOD3-204ENST00000424135 PKD2Q13563 968 aa18.88■□□□□ 0.61
PLOD3-204ENST00000424135 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
PLOD3-204ENST00000424135 NCOA2Q15596 1464 aa18.88■□□□□ 0.61
PLOD3-204ENST00000424135 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
PLOD3-204ENST00000424135 KIF3BO15066 747 aa18.87■□□□□ 0.61
PLOD3-204ENST00000424135 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
PLOD3-204ENST00000424135 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
PLOD3-204ENST00000424135 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms