RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
CMC1-204ENST00000423894 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
CMC1-204ENST00000423894 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
CMC1-204ENST00000423894 MLECQ14165 292 aa23.11■■□□□ 1.29
CMC1-204ENST00000423894 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
CMC1-204ENST00000423894 ARHGEF12Q9NZN5 1544 aa23.1■■□□□ 1.29
CMC1-204ENST00000423894 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
CMC1-204ENST00000423894 ARHGEF40Q8TER5 1519 aa23.09■■□□□ 1.29
CMC1-204ENST00000423894 MYO5CQ9NQX4 1742 aa23.09■■□□□ 1.29
CMC1-204ENST00000423894 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
CMC1-204ENST00000423894 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.29
CMC1-204ENST00000423894 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
CMC1-204ENST00000423894 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
CMC1-204ENST00000423894 GPATCH8Q9UKJ3 1502 aaKnown RBP23.06■■□□□ 1.28
CMC1-204ENST00000423894 PTPRMP28827 1452 aa23.05■■□□□ 1.28
CMC1-204ENST00000423894 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
CMC1-204ENST00000423894 MTUS2Q5JR59 1369 aa23.05■■□□□ 1.28
CMC1-204ENST00000423894 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
CMC1-204ENST00000423894 SIGLEC1Q9BZZ2 1709 aa23.05■■□□□ 1.28
CMC1-204ENST00000423894 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■■■ 33.5
CMC1-204ENST00000423894 CDC42BPBQ9Y5S2 1711 aa23.04■■□□□ 1.28
CMC1-204ENST00000423894 ATP10AO60312 1499 aa23.02■■□□□ 1.28
CMC1-204ENST00000423894 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
CMC1-204ENST00000423894 ZNF644Q9H582 1327 aaPredicted RBP23.01■■□□□ 1.27
CMC1-204ENST00000423894 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
CMC1-204ENST00000423894 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
CMC1-204ENST00000423894 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
CMC1-204ENST00000423894 PREX2Q70Z35 1606 aa22.98■■□□□ 1.27
CMC1-204ENST00000423894 MADDQ8WXG6 1647 aa22.98■■□□□ 1.27
CMC1-204ENST00000423894 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
CMC1-204ENST00000423894 ABCC1P33527 1531 aa22.97■■□□□ 1.27
CMC1-204ENST00000423894 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
CMC1-204ENST00000423894 KDM5CP41229 1560 aa22.95■■□□□ 1.26
CMC1-204ENST00000423894 CDC42BPAQ5VT25 1732 aa22.95■■□□□ 1.26
CMC1-204ENST00000423894 MLH3Q9UHC1 1453 aa22.93■■□□□ 1.26
CMC1-204ENST00000423894 SAMD9LQ8IVG5 1584 aa22.93■■□□□ 1.26
CMC1-204ENST00000423894 CEBPAP49715 358 aaPredicted RBP22.92■■□□□ 1.26
CMC1-204ENST00000423894 KANK4Q5T7N3 995 aaPredicted RBP22.92■■□□□ 1.26
CMC1-204ENST00000423894 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
CMC1-204ENST00000423894 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.26
CMC1-204ENST00000423894 SYCP2Q9BX26 1530 aa22.89■■□□□ 1.26
CMC1-204ENST00000423894 DIP2CQ9Y2E4 1556 aa22.88■■□□□ 1.25
CMC1-204ENST00000423894 RIMS1Q86UR5 1692 aaKnown RBP22.87■■□□□ 1.25
CMC1-204ENST00000423894 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
CMC1-204ENST00000423894 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
CMC1-204ENST00000423894 EHBP1L1Q8N3D4 1523 aa22.86■■□□□ 1.25
CMC1-204ENST00000423894 TIAM1Q13009 1591 aa22.85■■□□□ 1.25
CMC1-204ENST00000423894 HSPA2P54652 639 aa22.85■■□□□ 1.25
CMC1-204ENST00000423894 ABCA6Q8N139 1617 aa22.85■■□□□ 1.25
CMC1-204ENST00000423894 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
CMC1-204ENST00000423894 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
CMC1-204ENST00000423894 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
CMC1-204ENST00000423894 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
CMC1-204ENST00000423894 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
CMC1-204ENST00000423894 LMTK3Q96Q04 1460 aa22.79■■□□□ 1.24
CMC1-204ENST00000423894 REREQ9P2R6 1566 aa22.75■■□□□ 1.23
CMC1-204ENST00000423894 AGLP35573 1532 aa22.74■■□□□ 1.23
CMC1-204ENST00000423894 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
CMC1-204ENST00000423894 FER1L4A9Z1Z3 1794 aa22.72■■□□□ 1.23
CMC1-204ENST00000423894 GGT6Q6P531 493 aa22.7■■□□□ 1.22
CMC1-204ENST00000423894 ESF1Q9H501 851 aaKnown RBP22.7■■□□□ 1.22
CMC1-204ENST00000423894 A2MP01023 1474 aa22.7■■□□□ 1.22
CMC1-204ENST00000423894 SUPT6HQ7KZ85 1726 aaKnown RBP22.69■■□□□ 1.22
CMC1-204ENST00000423894 CAMSAP2Q08AD1 1489 aa22.69■■□□□ 1.22
CMC1-204ENST00000423894 MAP3K1Q13233 1512 aa22.67■■□□□ 1.22
CMC1-204ENST00000423894 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
CMC1-204ENST00000423894 INO80Q9ULG1 1556 aaPredicted RBP22.67■■□□□ 1.22
CMC1-204ENST00000423894 APLP2Q06481 763 aa22.64■■□□□ 1.21
CMC1-204ENST00000423894 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
CMC1-204ENST00000423894 CCDC141Q6ZP82 1450 aa22.63■■□□□ 1.21
CMC1-204ENST00000423894 RSPH4AQ5TD94 716 aa22.63■■□□□ 1.21
CMC1-204ENST00000423894 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
CMC1-204ENST00000423894 DHX29Q7Z478 1369 aaKnown RBP22.63■■□□□ 1.21
CMC1-204ENST00000423894 KIF3BO15066 747 aa22.61■■□□□ 1.21
CMC1-204ENST00000423894 TSPY4P0CV99 314 aa22.61■■□□□ 1.21
CMC1-204ENST00000423894 TSPY10P0CW01 314 aa22.61■■□□□ 1.21
CMC1-204ENST00000423894 PLXNC1O60486 1568 aa22.6■■□□□ 1.21
CMC1-204ENST00000423894 MYOM3Q5VTT5 1437 aa22.59■■□□□ 1.21
CMC1-204ENST00000423894 CNTLNQ9NXG0 1405 aa22.57■■□□□ 1.2
CMC1-204ENST00000423894 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
CMC1-204ENST00000423894 C3P01024 1663 aa22.55■■□□□ 1.2
CMC1-204ENST00000423894 UHRF1BP1Q6BDS2 1440 aa22.54■■□□□ 1.2
CMC1-204ENST00000423894 ARHGEF5Q12774 1597 aa22.52■■□□□ 1.2
CMC1-204ENST00000423894 FBXO31Q5XUX0 539 aaPredicted RBP22.51■■□□□ 1.19
CMC1-204ENST00000423894 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
CMC1-204ENST00000423894 ADGBQ8N7X0 1667 aa22.49■■□□□ 1.19
CMC1-204ENST00000423894 ABCC5O15440 1437 aa22.48■■□□□ 1.19
CMC1-204ENST00000423894 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
CMC1-204ENST00000423894 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
CMC1-204ENST00000423894 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
CMC1-204ENST00000423894 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
CMC1-204ENST00000423894 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
CMC1-204ENST00000423894 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
CMC1-204ENST00000423894 CHIC2Q9UKJ5 165 aa22.46■■□□□ 1.19
CMC1-204ENST00000423894 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
CMC1-204ENST00000423894 NPATQ14207 1427 aa22.46■■□□□ 1.19
CMC1-204ENST00000423894 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
CMC1-204ENST00000423894 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
CMC1-204ENST00000423894 PTPN23Q9H3S7 1636 aa22.4■■□□□ 1.18
CMC1-204ENST00000423894 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms