RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 IQGAP2Q13576 1575 aa16.33■□□□□ 0.21
ERCC1-204ENST00000423698 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
ERCC1-204ENST00000423698 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
ERCC1-204ENST00000423698 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
ERCC1-204ENST00000423698 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
ERCC1-204ENST00000423698 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
ERCC1-204ENST00000423698 EPRSP07814 1512 aaKnown RBP16.3■□□□□ 0.2
ERCC1-204ENST00000423698 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
ERCC1-204ENST00000423698 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-204ENST00000423698 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.2
ERCC1-204ENST00000423698 MRS2Q9HD23 443 aa16.27■□□□□ 0.19
ERCC1-204ENST00000423698 WDR62O43379 1518 aa16.26■□□□□ 0.19
ERCC1-204ENST00000423698 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
ERCC1-204ENST00000423698 NBR1Q14596 966 aa16.25■□□□□ 0.19
ERCC1-204ENST00000423698 EIF4G3O43432 1585 aaKnown RBP16.24■□□□□ 0.19
ERCC1-204ENST00000423698 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-204ENST00000423698 DEKP35659 375 aaKnown RBP16.23■□□□□ 0.19
ERCC1-204ENST00000423698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.197e-7■■■■■ 52.8
ERCC1-204ENST00000423698 PKD2Q13563 968 aa16.23■□□□□ 0.19
ERCC1-204ENST00000423698 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
ERCC1-204ENST00000423698 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
ERCC1-204ENST00000423698 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
ERCC1-204ENST00000423698 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
ERCC1-204ENST00000423698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.195e-7■■□□□ 12.5
ERCC1-204ENST00000423698 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
ERCC1-204ENST00000423698 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-204ENST00000423698 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
ERCC1-204ENST00000423698 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.191e-10■■■□□ 16.5
ERCC1-204ENST00000423698 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
ERCC1-204ENST00000423698 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
ERCC1-204ENST00000423698 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
ERCC1-204ENST00000423698 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
ERCC1-204ENST00000423698 ABCC5O15440 1437 aa16.16■□□□□ 0.18
ERCC1-204ENST00000423698 DISP1Q96F81 1524 aa16.16■□□□□ 0.18
ERCC1-204ENST00000423698 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
ERCC1-204ENST00000423698 DAPK1P53355 1430 aa16.15■□□□□ 0.18
ERCC1-204ENST00000423698 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.18
ERCC1-204ENST00000423698 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
ERCC1-204ENST00000423698 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
ERCC1-204ENST00000423698 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-204ENST00000423698 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
ERCC1-204ENST00000423698 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
ERCC1-204ENST00000423698 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
ERCC1-204ENST00000423698 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
ERCC1-204ENST00000423698 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
ERCC1-204ENST00000423698 ANKRD30BQ9BXX2 1392 aa16.11■□□□□ 0.17
ERCC1-204ENST00000423698 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
ERCC1-204ENST00000423698 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
ERCC1-204ENST00000423698 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
ERCC1-204ENST00000423698 NUP155O75694 1391 aa16.09■□□□□ 0.17
ERCC1-204ENST00000423698 MAGI1Q96QZ7 1491 aaPredicted RBP16.09■□□□□ 0.17
ERCC1-204ENST00000423698 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
ERCC1-204ENST00000423698 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
ERCC1-204ENST00000423698 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
ERCC1-204ENST00000423698 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
ERCC1-204ENST00000423698 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.07■□□□□ 0.16
ERCC1-204ENST00000423698 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
ERCC1-204ENST00000423698 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
ERCC1-204ENST00000423698 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
ERCC1-204ENST00000423698 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
ERCC1-204ENST00000423698 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
ERCC1-204ENST00000423698 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
ERCC1-204ENST00000423698 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-204ENST00000423698 CNTLNQ9NXG0 1405 aa16.03■□□□□ 0.16
ERCC1-204ENST00000423698 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.16
ERCC1-204ENST00000423698 KIF14Q15058 1648 aa16.02■□□□□ 0.15
ERCC1-204ENST00000423698 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
ERCC1-204ENST00000423698 USP47Q96K76 1375 aa16.01■□□□□ 0.15
ERCC1-204ENST00000423698 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
ERCC1-204ENST00000423698 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
ERCC1-204ENST00000423698 NCOA1Q15788 1441 aa16■□□□□ 0.15
ERCC1-204ENST00000423698 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
ERCC1-204ENST00000423698 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
ERCC1-204ENST00000423698 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
ERCC1-204ENST00000423698 IL27Q8NEV9 243 aa15.99■□□□□ 0.15
ERCC1-204ENST00000423698 RPRD2Q5VT52 1461 aaKnown RBP15.98■□□□□ 0.15
ERCC1-204ENST00000423698 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
ERCC1-204ENST00000423698 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
ERCC1-204ENST00000423698 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
ERCC1-204ENST00000423698 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
ERCC1-204ENST00000423698 NUP160Q12769 1436 aa15.96■□□□□ 0.15
ERCC1-204ENST00000423698 PZPP20742 1482 aa15.96■□□□□ 0.15
ERCC1-204ENST00000423698 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.14
ERCC1-204ENST00000423698 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
ERCC1-204ENST00000423698 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
ERCC1-204ENST00000423698 PTPRGP23470 1445 aa15.93■□□□□ 0.14
ERCC1-204ENST00000423698 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
ERCC1-204ENST00000423698 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
ERCC1-204ENST00000423698 ATP10BO94823 1461 aa15.91■□□□□ 0.14
ERCC1-204ENST00000423698 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
ERCC1-204ENST00000423698 DNMT1P26358 1616 aaKnown RBP15.9■□□□□ 0.14
ERCC1-204ENST00000423698 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
ERCC1-204ENST00000423698 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
ERCC1-204ENST00000423698 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
ERCC1-204ENST00000423698 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
ERCC1-204ENST00000423698 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
ERCC1-204ENST00000423698 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
ERCC1-204ENST00000423698 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
ERCC1-204ENST00000423698 ERICH6BQ5W0A0 696 aa15.84■□□□□ 0.13
ERCC1-204ENST00000423698 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms