RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 A0A0G2JS52 829 aa14□□□□□ -0.17
SEMA4D-208ENST00000422704 GRIN2BQ13224 1484 aa14□□□□□ -0.17
SEMA4D-208ENST00000422704 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
SEMA4D-208ENST00000422704 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
SEMA4D-208ENST00000422704 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-208ENST00000422704 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
SEMA4D-208ENST00000422704 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
SEMA4D-208ENST00000422704 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
SEMA4D-208ENST00000422704 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
SEMA4D-208ENST00000422704 SAMD9Q5K651 1589 aa13.96□□□□□ -0.18
SEMA4D-208ENST00000422704 FYCO1Q9BQS8 1478 aa13.96□□□□□ -0.18
SEMA4D-208ENST00000422704 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
SEMA4D-208ENST00000422704 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
SEMA4D-208ENST00000422704 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
SEMA4D-208ENST00000422704 CASKIN1Q8WXD9 1431 aa13.93□□□□□ -0.18
SEMA4D-208ENST00000422704 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-208ENST00000422704 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
SEMA4D-208ENST00000422704 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
SEMA4D-208ENST00000422704 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-208ENST00000422704 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
SEMA4D-208ENST00000422704 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
SEMA4D-208ENST00000422704 FHOD3Q2V2M9 1422 aa13.9□□□□□ -0.19
SEMA4D-208ENST00000422704 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-208ENST00000422704 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-208ENST00000422704 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-208ENST00000422704 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
SEMA4D-208ENST00000422704 SOX12O15370 315 aa13.88□□□□□ -0.19
SEMA4D-208ENST00000422704 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-208ENST00000422704 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
SEMA4D-208ENST00000422704 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-208ENST00000422704 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-208ENST00000422704 SPRYD3Q8NCJ5 442 aa13.87□□□□□ -0.19
SEMA4D-208ENST00000422704 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
SEMA4D-208ENST00000422704 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-208ENST00000422704 MYH16Q9H6N6 1097 aa13.86□□□□□ -0.19
SEMA4D-208ENST00000422704 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-208ENST00000422704 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
SEMA4D-208ENST00000422704 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-208ENST00000422704 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
SEMA4D-208ENST00000422704 LMOD2Q6P5Q4 547 aa13.81□□□□□ -0.2
SEMA4D-208ENST00000422704 KIAA0586Q9BVV6 1533 aa13.81□□□□□ -0.2
SEMA4D-208ENST00000422704 BECN1Q14457 450 aa13.81□□□□□ -0.2
SEMA4D-208ENST00000422704 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
SEMA4D-208ENST00000422704 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
SEMA4D-208ENST00000422704 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
SEMA4D-208ENST00000422704 PKD2Q13563 968 aa13.8□□□□□ -0.2
SEMA4D-208ENST00000422704 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
SEMA4D-208ENST00000422704 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
SEMA4D-208ENST00000422704 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
SEMA4D-208ENST00000422704 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-208ENST00000422704 DDRGK1Q96HY6 314 aa13.78□□□□□ -0.2
SEMA4D-208ENST00000422704 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.2
SEMA4D-208ENST00000422704 MLECQ14165 292 aa13.77□□□□□ -0.21
SEMA4D-208ENST00000422704 POGKQ9P215 609 aa13.77□□□□□ -0.21
SEMA4D-208ENST00000422704 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
SEMA4D-208ENST00000422704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEMA4D-208ENST00000422704 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
SEMA4D-208ENST00000422704 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SEMA4D-208ENST00000422704 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
SEMA4D-208ENST00000422704 APBB1O00213 710 aa13.75□□□□□ -0.21
SEMA4D-208ENST00000422704 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
SEMA4D-208ENST00000422704 STK26Q9P289 416 aa13.74□□□□□ -0.21
SEMA4D-208ENST00000422704 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
SEMA4D-208ENST00000422704 KIAA0556O60303 1618 aa13.74□□□□□ -0.21
SEMA4D-208ENST00000422704 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
SEMA4D-208ENST00000422704 GGT6Q6P531 493 aa13.73□□□□□ -0.21
SEMA4D-208ENST00000422704 PHLDB1Q86UU1 1377 aa13.72□□□□□ -0.21
SEMA4D-208ENST00000422704 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
SEMA4D-208ENST00000422704 SUPT6HQ7KZ85 1726 aaKnown RBP13.71□□□□□ -0.21
SEMA4D-208ENST00000422704 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.21
SEMA4D-208ENST00000422704 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
SEMA4D-208ENST00000422704 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.22
SEMA4D-208ENST00000422704 NUP160Q12769 1436 aa13.71□□□□□ -0.22
SEMA4D-208ENST00000422704 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
SEMA4D-208ENST00000422704 TMF1P82094 1093 aa13.7□□□□□ -0.22
SEMA4D-208ENST00000422704 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
SEMA4D-208ENST00000422704 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
SEMA4D-208ENST00000422704 DISP1Q96F81 1524 aa13.69□□□□□ -0.22
SEMA4D-208ENST00000422704 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
SEMA4D-208ENST00000422704 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 GLIPR1L2Q4G1C9 344 aa13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 NUTM2DQ5VT03 806 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
SEMA4D-208ENST00000422704 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
SEMA4D-208ENST00000422704 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-208ENST00000422704 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
SEMA4D-208ENST00000422704 EPRSP07814 1512 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-208ENST00000422704 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
SEMA4D-208ENST00000422704 CARMIL2Q6F5E8 1435 aa13.66□□□□□ -0.22
SEMA4D-208ENST00000422704 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
SEMA4D-208ENST00000422704 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.22
SEMA4D-208ENST00000422704 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
SEMA4D-208ENST00000422704 NCOA2Q15596 1464 aa13.65□□□□□ -0.22
SEMA4D-208ENST00000422704 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
SEMA4D-208ENST00000422704 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
SEMA4D-208ENST00000422704 PLIN1O60240 522 aa13.63□□□□□ -0.23
SEMA4D-208ENST00000422704 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-208ENST00000422704 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms