RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
CDC42EP3-202ENST00000422687 PRKCSHP14314 528 aaPredicted RBP9.13□□□□□ -0.95
CDC42EP3-202ENST00000422687 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
CDC42EP3-202ENST00000422687 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
CDC42EP3-202ENST00000422687 PEG3Q9GZU2 1588 aa9.12□□□□□ -0.95
CDC42EP3-202ENST00000422687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-202ENST00000422687 MKRN3Q13064 507 aaKnown RBP9.12□□□□□ -0.95
CDC42EP3-202ENST00000422687 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-202ENST00000422687 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CDC42EP3-202ENST00000422687 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
CDC42EP3-202ENST00000422687 THOC2Q8NI27 1593 aaKnown RBP9.11□□□□□ -0.95
CDC42EP3-202ENST00000422687 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
CDC42EP3-202ENST00000422687 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
CDC42EP3-202ENST00000422687 BAZ1AQ9NRL2 1556 aaPredicted RBP9.09□□□□□ -0.95
CDC42EP3-202ENST00000422687 LAMC3Q9Y6N6 1575 aa9.08□□□□□ -0.96
CDC42EP3-202ENST00000422687 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP3-202ENST00000422687 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
CDC42EP3-202ENST00000422687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42EP3-202ENST00000422687 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
CDC42EP3-202ENST00000422687 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
CDC42EP3-202ENST00000422687 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
CDC42EP3-202ENST00000422687 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
CDC42EP3-202ENST00000422687 SOX12O15370 315 aa9.03□□□□□ -0.96
CDC42EP3-202ENST00000422687 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
CDC42EP3-202ENST00000422687 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.97
CDC42EP3-202ENST00000422687 STK25O00506 426 aa9.01□□□□□ -0.97
CDC42EP3-202ENST00000422687 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
CDC42EP3-202ENST00000422687 CADPSQ9ULU8 1353 aa9□□□□□ -0.97
CDC42EP3-202ENST00000422687 STK24Q9Y6E0 443 aa9□□□□□ -0.97
CDC42EP3-202ENST00000422687 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
CDC42EP3-202ENST00000422687 DPY19L2Q6NUT2 758 aa8.97□□□□□ -0.97
CDC42EP3-202ENST00000422687 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.97
CDC42EP3-202ENST00000422687 WDR62O43379 1518 aa8.96□□□□□ -0.97
CDC42EP3-202ENST00000422687 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.98
CDC42EP3-202ENST00000422687 FBXO22Q8NEZ5 403 aa8.95□□□□□ -0.98
CDC42EP3-202ENST00000422687 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
CDC42EP3-202ENST00000422687 NLRP6P59044 892 aa8.94□□□□□ -0.98
CDC42EP3-202ENST00000422687 NBR1Q14596 966 aa8.94□□□□□ -0.98
CDC42EP3-202ENST00000422687 CDAN1Q8IWY9 1227 aa8.94□□□□□ -0.98
CDC42EP3-202ENST00000422687 TMEM121BQ9BXQ6 578 aaPredicted RBP8.94□□□□□ -0.98
CDC42EP3-202ENST00000422687 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
CDC42EP3-202ENST00000422687 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
CDC42EP3-202ENST00000422687 RYDENQ9NUL5 291 aaKnown RBP8.93□□□□□ -0.98
CDC42EP3-202ENST00000422687 BOLA1Q9Y3E2 137 aa8.93□□□□□ -0.98
CDC42EP3-202ENST00000422687 C3orf67Q6ZVT6 689 aa8.92□□□□□ -0.98
CDC42EP3-202ENST00000422687 SLAIN1Q8ND83 568 aa8.92□□□□□ -0.98
CDC42EP3-202ENST00000422687 G3V3G9 751 aa8.89□□□□□ -0.99
CDC42EP3-202ENST00000422687 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
CDC42EP3-202ENST00000422687 CEP164Q9UPV0 1460 aa8.89□□□□□ -0.99
CDC42EP3-202ENST00000422687 CFTRP13569 1480 aa8.87□□□□□ -0.99
CDC42EP3-202ENST00000422687 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
CDC42EP3-202ENST00000422687 WIZO95785 1651 aa8.85□□□□□ -0.99
CDC42EP3-202ENST00000422687 URB2Q14146 1524 aaKnown RBP8.82□□□□□ -1
CDC42EP3-202ENST00000422687 SNPHO15079 494 aa8.81□□□□□ -1
CDC42EP3-202ENST00000422687 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
CDC42EP3-202ENST00000422687 MMRN1Q13201 1228 aa8.79□□□□□ -1
CDC42EP3-202ENST00000422687 TMEM92Q6UXU6 159 aa8.79□□□□□ -1
CDC42EP3-202ENST00000422687 TOP2AP11388 1531 aaKnown RBP8.77□□□□□ -1.01
CDC42EP3-202ENST00000422687 ST18O60284 1047 aa8.77□□□□□ -1.01
CDC42EP3-202ENST00000422687 P3H3Q8IVL6 736 aa8.77□□□□□ -1.01
CDC42EP3-202ENST00000422687 PPP1R37O75864 691 aa8.76□□□□□ -1.01
CDC42EP3-202ENST00000422687 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
CDC42EP3-202ENST00000422687 SPNS2Q8IVW8 549 aa8.75□□□□□ -1.01
CDC42EP3-202ENST00000422687 IFT140Q96RY7 1462 aa8.74□□□□□ -1.01
CDC42EP3-202ENST00000422687 RIMBP3CA6NJZ7 1639 aa8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 RIMBP3BA6NNM3 1639 aa8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 RIMBP3Q9UFD9 1639 aa8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 KIF3CO14782 793 aa8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 HOXB3P14651 431 aaPredicted RBP8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 ZNF608Q9ULD9 1512 aaPredicted RBP8.73□□□□□ -1.01
CDC42EP3-202ENST00000422687 KCNV2Q8TDN2 545 aa8.72□□□□□ -1.01
CDC42EP3-202ENST00000422687 ARHGEF11O15085 1522 aa8.71□□□□□ -1.01
CDC42EP3-202ENST00000422687 DOK7Q18PE1 504 aa8.69□□□□□ -1.02
CDC42EP3-202ENST00000422687 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
CDC42EP3-202ENST00000422687 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
CDC42EP3-202ENST00000422687 C2orf72A6NCS6 295 aa8.67□□□□□ -1.02
CDC42EP3-202ENST00000422687 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
CDC42EP3-202ENST00000422687 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
CDC42EP3-202ENST00000422687 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
CDC42EP3-202ENST00000422687 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
CDC42EP3-202ENST00000422687 RIMBP2O15034 1052 aa8.65□□□□□ -1.02
CDC42EP3-202ENST00000422687 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
CDC42EP3-202ENST00000422687 EIF4G3O43432 1585 aaKnown RBP8.65□□□□□ -1.03
CDC42EP3-202ENST00000422687 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
CDC42EP3-202ENST00000422687 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
CDC42EP3-202ENST00000422687 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
CDC42EP3-202ENST00000422687 CYB5RLQ6IPT4 315 aa8.63□□□□□ -1.03
CDC42EP3-202ENST00000422687 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
CDC42EP3-202ENST00000422687 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
CDC42EP3-202ENST00000422687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42EP3-202ENST00000422687 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
CDC42EP3-202ENST00000422687 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42EP3-202ENST00000422687 SLC34A2O95436 690 aa8.61□□□□□ -1.03
CDC42EP3-202ENST00000422687 FOXK1P85037 733 aa8.61□□□□□ -1.03
CDC42EP3-202ENST00000422687 ARHGEF1Q92888 912 aaKnown RBP8.61□□□□□ -1.03
CDC42EP3-202ENST00000422687 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
CDC42EP3-202ENST00000422687 EMP3P54852 163 aa8.6□□□□□ -1.03
CDC42EP3-202ENST00000422687 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
CDC42EP3-202ENST00000422687 LMOD2Q6P5Q4 547 aa8.6□□□□□ -1.03
CDC42EP3-202ENST00000422687 MARVELD3Q96A59 401 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms