RNA–Protein interactions for RNA: ENST00000422611.6

SLC12A4-202, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 4,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-202ENST00000422611 PDE4AP27815 886 aa24.83■■□□□ 1.57
SLC12A4-202ENST00000422611 IGF1RP08069 1367 aa24.83■■□□□ 1.57
SLC12A4-202ENST00000422611 NUP155O75694 1391 aa24.82■■□□□ 1.56
SLC12A4-202ENST00000422611 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
SLC12A4-202ENST00000422611 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
SLC12A4-202ENST00000422611 STAG3Q9UJ98 1225 aa24.8■■□□□ 1.56
SLC12A4-202ENST00000422611 ST20-MTHFSA0A0A6YYL1 179 aa24.8■■□□□ 1.56
SLC12A4-202ENST00000422611 NLRP13Q86W25 1043 aa24.78■■□□□ 1.56
SLC12A4-202ENST00000422611 LRRC9Q6ZRR7 1453 aa24.78■■□□□ 1.56
SLC12A4-202ENST00000422611 NCLP19338 710 aaKnown RBP24.77■■□□□ 1.56
SLC12A4-202ENST00000422611 CFAP53Q96M91 514 aa24.77■■□□□ 1.56
SLC12A4-202ENST00000422611 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
SLC12A4-202ENST00000422611 MYH16Q9H6N6 1097 aa24.75■■□□□ 1.55
SLC12A4-202ENST00000422611 CCDC184Q52MB2 194 aa24.74■■□□□ 1.55
SLC12A4-202ENST00000422611 KIF7Q2M1P5 1343 aa24.74■■□□□ 1.55
SLC12A4-202ENST00000422611 CCDC7Q96M83 1385 aa24.74■■□□□ 1.55
SLC12A4-202ENST00000422611 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
SLC12A4-202ENST00000422611 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
SLC12A4-202ENST00000422611 FGD6Q6ZV73 1430 aa24.72■■□□□ 1.55
SLC12A4-202ENST00000422611 MSH5O43196 834 aa24.71■■□□□ 1.55
SLC12A4-202ENST00000422611 PAK3O75914 559 aaPredicted RBP24.71■■□□□ 1.55
SLC12A4-202ENST00000422611 UACAQ9BZF9 1416 aa24.7■■□□□ 1.54
SLC12A4-202ENST00000422611 GZF1Q9H116 711 aaPredicted RBP24.7■■□□□ 1.54
SLC12A4-202ENST00000422611 GOLGA6L22H0YM25 854 aa24.7■■□□□ 1.54
SLC12A4-202ENST00000422611 MYBBP1AQ9BQG0 1328 aaKnown RBP24.69■■□□□ 1.54
SLC12A4-202ENST00000422611 USP47Q96K76 1375 aa24.69■■□□□ 1.54
SLC12A4-202ENST00000422611 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
SLC12A4-202ENST00000422611 CNTLNQ9NXG0 1405 aa24.68■■□□□ 1.54
SLC12A4-202ENST00000422611 PDE3BQ13370 1112 aa24.67■■□□□ 1.54
SLC12A4-202ENST00000422611 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
SLC12A4-202ENST00000422611 CRBNQ96SW2 442 aa24.66■■□□□ 1.54
SLC12A4-202ENST00000422611 U2SURPO15042 1029 aaKnown RBP24.65■■□□□ 1.54
SLC12A4-202ENST00000422611 ANKRD30AQ9BXX3 1397 aa24.64■■□□□ 1.54
SLC12A4-202ENST00000422611 GOLGA2Q08379 1002 aa24.63■■□□□ 1.53
SLC12A4-202ENST00000422611 HSP90AB1P08238 724 aaKnown RBP24.62■■□□□ 1.53
SLC12A4-202ENST00000422611 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
SLC12A4-202ENST00000422611 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
SLC12A4-202ENST00000422611 TPRNQ4KMQ1 711 aa24.61■■□□□ 1.53
SLC12A4-202ENST00000422611 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
SLC12A4-202ENST00000422611 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
SLC12A4-202ENST00000422611 HNRNPMP52272 730 aaKnown RBP eCLIP24.59■■□□□ 1.53
SLC12A4-202ENST00000422611 L1TD1Q5T7N2 865 aaKnown RBP24.59■■□□□ 1.53
SLC12A4-202ENST00000422611 ERICH3Q5RHP9 1530 aa24.59■■□□□ 1.53
SLC12A4-202ENST00000422611 PANK3Q9H999 370 aa24.58■■□□□ 1.53
SLC12A4-202ENST00000422611 ZNF644Q9H582 1327 aaPredicted RBP24.58■■□□□ 1.53
SLC12A4-202ENST00000422611 GSE1Q14687 1217 aa24.58■■□□□ 1.53
SLC12A4-202ENST00000422611 HSCBQ8IWL3 235 aa24.58■■□□□ 1.52
SLC12A4-202ENST00000422611 AKNAQ7Z591 1439 aa24.57■■□□□ 1.52
SLC12A4-202ENST00000422611 MORC1Q86VD1 984 aa24.57■■□□□ 1.52
SLC12A4-202ENST00000422611 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
SLC12A4-202ENST00000422611 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
SLC12A4-202ENST00000422611 MYOM3Q5VTT5 1437 aa24.56■■□□□ 1.52
SLC12A4-202ENST00000422611 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
SLC12A4-202ENST00000422611 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
SLC12A4-202ENST00000422611 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
SLC12A4-202ENST00000422611 NBPF8Q3BBV2 869 aa24.51■■□□□ 1.51
SLC12A4-202ENST00000422611 PTMAP06454 111 aaKnown RBP24.5■■□□□ 1.51
SLC12A4-202ENST00000422611 SAFB2Q14151 953 aaKnown RBP eCLIP24.5■■□□□ 1.51
SLC12A4-202ENST00000422611 CENPQQ7L2Z9 268 aaPredicted RBP24.49■■□□□ 1.51
SLC12A4-202ENST00000422611 MS4A1P11836 297 aa24.48■■□□□ 1.51
SLC12A4-202ENST00000422611 MFAP1P55081 439 aaKnown RBP24.48■■□□□ 1.51
SLC12A4-202ENST00000422611 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
SLC12A4-202ENST00000422611 CDCA7LQ96GN5 454 aa24.48■■□□□ 1.51
SLC12A4-202ENST00000422611 IL27Q8NEV9 243 aa24.46■■□□□ 1.51
SLC12A4-202ENST00000422611 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
SLC12A4-202ENST00000422611 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
SLC12A4-202ENST00000422611 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
SLC12A4-202ENST00000422611 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 U2AF1L5P0DN76 240 aaPredicted RBP24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 U2AF1Q01081 240 aaKnown RBP eCLIP24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 RWDD1Q9H446 243 aaPredicted RBP24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 DNTTIP2Q5QJE6 756 aaKnown RBP24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 BCL2L13Q9BXK5 485 aa24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 RRP7AQ9Y3A4 280 aaKnown RBP24.44■■□□□ 1.5
SLC12A4-202ENST00000422611 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
SLC12A4-202ENST00000422611 CENPJQ9HC77 1338 aaPredicted RBP24.43■■□□□ 1.5
SLC12A4-202ENST00000422611 ITPRIPQ8IWB1 547 aa24.42■■□□□ 1.5
SLC12A4-202ENST00000422611 TIAM1Q13009 1591 aa24.41■■□□□ 1.5
SLC12A4-202ENST00000422611 GOLGA6L3A6NEY3 463 aa24.4■■□□□ 1.5
SLC12A4-202ENST00000422611 NFKBIBQ15653 356 aa24.4■■□□□ 1.5
SLC12A4-202ENST00000422611 C11orf95C9JLR9 678 aaPredicted RBP24.39■■□□□ 1.5
SLC12A4-202ENST00000422611 COG6Q9Y2V7 657 aa24.39■■□□□ 1.5
SLC12A4-202ENST00000422611 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
SLC12A4-202ENST00000422611 CFTRP13569 1480 aa24.38■■□□□ 1.49
SLC12A4-202ENST00000422611 APAF1O14727 1248 aa24.38■■□□□ 1.49
SLC12A4-202ENST00000422611 POGKQ9P215 609 aa24.38■■□□□ 1.49
SLC12A4-202ENST00000422611 ANO8Q9HCE9 1232 aaPredicted RBP24.37■■□□□ 1.49
SLC12A4-202ENST00000422611 CASC1Q6TDU7 716 aa24.37■■□□□ 1.49
SLC12A4-202ENST00000422611 PMFBP1Q8TBY8 1022 aa24.37■■□□□ 1.49
SLC12A4-202ENST00000422611 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SLC12A4-202ENST00000422611 PLCB2Q00722 1185 aa24.35■■□□□ 1.49
SLC12A4-202ENST00000422611 FOXD4L1Q9NU39 408 aa24.35■■□□□ 1.49
SLC12A4-202ENST00000422611 HFM1A2PYH4 1435 aa24.35■■□□□ 1.49
SLC12A4-202ENST00000422611 CCDC144AA2RUR9 1427 aa24.34■■□□□ 1.49
SLC12A4-202ENST00000422611 SRPK2P78362 688 aaKnown RBP24.34■■□□□ 1.49
SLC12A4-202ENST00000422611 APBB1O00213 710 aa24.34■■□□□ 1.49
SLC12A4-202ENST00000422611 BRPF3Q9ULD4 1205 aa24.34■■□□□ 1.49
SLC12A4-202ENST00000422611 PNISRQ8TF01 805 aaKnown RBP24.34■■□□□ 1.49
SLC12A4-202ENST00000422611 CUX1P39880 1505 aa24.33■■□□□ 1.49
SLC12A4-202ENST00000422611 SMC4Q9NTJ3 1288 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms