RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
CLCN4-203ENST00000421085 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
CLCN4-203ENST00000421085 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
CLCN4-203ENST00000421085 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
CLCN4-203ENST00000421085 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
CLCN4-203ENST00000421085 RWDD1Q9H446 243 aaPredicted RBP15.61■□□□□ 0.09
CLCN4-203ENST00000421085 APBB1O00213 710 aa15.61■□□□□ 0.09
CLCN4-203ENST00000421085 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
CLCN4-203ENST00000421085 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
CLCN4-203ENST00000421085 SYAP1Q96A49 352 aaPredicted RBP15.6■□□□□ 0.09
CLCN4-203ENST00000421085 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
CLCN4-203ENST00000421085 POGKQ9P215 609 aa15.6■□□□□ 0.09
CLCN4-203ENST00000421085 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
CLCN4-203ENST00000421085 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
CLCN4-203ENST00000421085 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
CLCN4-203ENST00000421085 ITPRIPQ8IWB1 547 aa15.57■□□□□ 0.08
CLCN4-203ENST00000421085 GSE1Q14687 1217 aa15.56■□□□□ 0.08
CLCN4-203ENST00000421085 IPO8O15397 1037 aaKnown RBP15.56■□□□□ 0.08
CLCN4-203ENST00000421085 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
CLCN4-203ENST00000421085 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
CLCN4-203ENST00000421085 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
CLCN4-203ENST00000421085 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
CLCN4-203ENST00000421085 RALBP1Q15311 655 aa15.53■□□□□ 0.08
CLCN4-203ENST00000421085 SLC4A3P48751 1232 aa15.52■□□□□ 0.08
CLCN4-203ENST00000421085 GNL2Q13823 731 aaKnown RBP15.52■□□□□ 0.08
CLCN4-203ENST00000421085 FOXD1Q16676 465 aa15.51■□□□□ 0.07
CLCN4-203ENST00000421085 PDE4AP27815 886 aa15.49■□□□□ 0.07
CLCN4-203ENST00000421085 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
CLCN4-203ENST00000421085 DDX11L8A8MPP1 907 aa15.49■□□□□ 0.07
CLCN4-203ENST00000421085 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
CLCN4-203ENST00000421085 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
CLCN4-203ENST00000421085 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
CLCN4-203ENST00000421085 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
CLCN4-203ENST00000421085 GOLGA6L1Q8N7Z2 621 aa15.46■□□□□ 0.07
CLCN4-203ENST00000421085 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
CLCN4-203ENST00000421085 TPM4P67936 248 aa15.46■□□□□ 0.07
CLCN4-203ENST00000421085 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
CLCN4-203ENST00000421085 LMOD2Q6P5Q4 547 aa15.46■□□□□ 0.06
CLCN4-203ENST00000421085 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
CLCN4-203ENST00000421085 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
CLCN4-203ENST00000421085 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLCN4-203ENST00000421085 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
CLCN4-203ENST00000421085 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
CLCN4-203ENST00000421085 CLUAP1Q96AJ1 413 aa15.44■□□□□ 0.06
CLCN4-203ENST00000421085 SOX12O15370 315 aa15.44■□□□□ 0.06
CLCN4-203ENST00000421085 PHF14O94880 888 aa15.44■□□□□ 0.06
CLCN4-203ENST00000421085 FOXD4L5Q5VV16 416 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-203ENST00000421085 FOXD4L4Q8WXT5 416 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-203ENST00000421085 SOGA1O94964 1423 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 CSPP1Q1MSJ5 1256 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
CLCN4-203ENST00000421085 SMC4Q9NTJ3 1288 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 PDE3BQ13370 1112 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 PKD2Q13563 968 aa15.43■□□□□ 0.06
CLCN4-203ENST00000421085 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLCN4-203ENST00000421085 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
CLCN4-203ENST00000421085 ARHGAP35Q9NRY4 1499 aa15.41■□□□□ 0.06
CLCN4-203ENST00000421085 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
CLCN4-203ENST00000421085 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
CLCN4-203ENST00000421085 CCDC146Q8IYE0 955 aa15.41■□□□□ 0.06
CLCN4-203ENST00000421085 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
CLCN4-203ENST00000421085 CLSTN1O94985 981 aa15.4■□□□□ 0.06
CLCN4-203ENST00000421085 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
CLCN4-203ENST00000421085 CENPQQ7L2Z9 268 aaPredicted RBP15.4■□□□□ 0.06
CLCN4-203ENST00000421085 ST18O60284 1047 aa15.39■□□□□ 0.05
CLCN4-203ENST00000421085 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
CLCN4-203ENST00000421085 NPHP1O15259 732 aa15.39■□□□□ 0.05
CLCN4-203ENST00000421085 EXOC6Q8TAG9 804 aa15.39■□□□□ 0.05
CLCN4-203ENST00000421085 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
CLCN4-203ENST00000421085 SKOR2Q2VWA4 1001 aaPredicted RBP15.38■□□□□ 0.05
CLCN4-203ENST00000421085 PLIN1O60240 522 aa15.37■□□□□ 0.05
CLCN4-203ENST00000421085 ZNF771Q7L3S4 317 aaPredicted RBP15.37■□□□□ 0.05
CLCN4-203ENST00000421085 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
CLCN4-203ENST00000421085 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
CLCN4-203ENST00000421085 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
CLCN4-203ENST00000421085 KANK1Q14678 1352 aa15.34■□□□□ 0.05
CLCN4-203ENST00000421085 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
CLCN4-203ENST00000421085 CRBNQ96SW2 442 aa15.33■□□□□ 0.05
CLCN4-203ENST00000421085 HMMRO75330 724 aa15.33■□□□□ 0.04
CLCN4-203ENST00000421085 HDGFL2Q7Z4V5 671 aaPredicted RBP15.33■□□□□ 0.04
CLCN4-203ENST00000421085 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.04
CLCN4-203ENST00000421085 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
CLCN4-203ENST00000421085 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
CLCN4-203ENST00000421085 STK26Q9P289 416 aa15.32■□□□□ 0.04
CLCN4-203ENST00000421085 FOXD4L6Q3SYB3 417 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-203ENST00000421085 FOXD4L3Q6VB84 417 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-203ENST00000421085 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
CLCN4-203ENST00000421085 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
CLCN4-203ENST00000421085 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
CLCN4-203ENST00000421085 SETQ01105 290 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-203ENST00000421085 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
CLCN4-203ENST00000421085 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
CLCN4-203ENST00000421085 CCDC34Q96HJ3 373 aa15.3■□□□□ 0.04
CLCN4-203ENST00000421085 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
CLCN4-203ENST00000421085 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
CLCN4-203ENST00000421085 TPM3P06753 285 aa15.29■□□□□ 0.04
CLCN4-203ENST00000421085 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
CLCN4-203ENST00000421085 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms