RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
SCAP-205ENST00000420588 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
SCAP-205ENST00000420588 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
SCAP-205ENST00000420588 KDM6BO15054 1643 aa21.43■■□□□ 1.02
SCAP-205ENST00000420588 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
SCAP-205ENST00000420588 CFAP74Q9C0B2 1584 aa21.42■■□□□ 1.02
SCAP-205ENST00000420588 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
SCAP-205ENST00000420588 CDC42BPAQ5VT25 1732 aa21.38■■□□□ 1.01
SCAP-205ENST00000420588 COL17A1Q9UMD9 1497 aaPredicted RBP21.38■■□□□ 1.01
SCAP-205ENST00000420588 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
SCAP-205ENST00000420588 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
SCAP-205ENST00000420588 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
SCAP-205ENST00000420588 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
SCAP-205ENST00000420588 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
SCAP-205ENST00000420588 ITSN2Q9NZM3 1697 aa21.34■■□□□ 1.01
SCAP-205ENST00000420588 ZNF644Q9H582 1327 aaPredicted RBP21.31■■□□□ 1
SCAP-205ENST00000420588 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
SCAP-205ENST00000420588 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
SCAP-205ENST00000420588 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
SCAP-205ENST00000420588 PLEKHH2Q8IVE3 1493 aa21.29■■□□□ 1
SCAP-205ENST00000420588 AFAP1Q8N556 730 aa21.28■■□□□ 1
SCAP-205ENST00000420588 MIA2Q96PC5 1412 aa21.28■■□□□ 1
SCAP-205ENST00000420588 SAMD9LQ8IVG5 1584 aa21.27■□□□□ 0.99
SCAP-205ENST00000420588 ABCC1P33527 1531 aa21.25■□□□□ 0.99
SCAP-205ENST00000420588 POGZQ7Z3K3 1410 aa21.25■□□□□ 0.99
SCAP-205ENST00000420588 KIAA1107Q9UPP5 1409 aa21.25■□□□□ 0.99
SCAP-205ENST00000420588 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
SCAP-205ENST00000420588 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
SCAP-205ENST00000420588 CAMSAP2Q08AD1 1489 aa21.23■□□□□ 0.99
SCAP-205ENST00000420588 ZNF518AQ6AHZ1 1483 aa21.23■□□□□ 0.99
SCAP-205ENST00000420588 TRAPPC8Q9Y2L5 1435 aa21.22■□□□□ 0.99
SCAP-205ENST00000420588 SYCP2Q9BX26 1530 aa21.22■□□□□ 0.99
SCAP-205ENST00000420588 FGD6Q6ZV73 1430 aa21.21■□□□□ 0.99
SCAP-205ENST00000420588 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
SCAP-205ENST00000420588 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
SCAP-205ENST00000420588 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
SCAP-205ENST00000420588 TSPY4P0CV99 314 aa21.19■□□□□ 0.98
SCAP-205ENST00000420588 TSPY10P0CW01 314 aa21.19■□□□□ 0.98
SCAP-205ENST00000420588 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
SCAP-205ENST00000420588 PTPN23Q9H3S7 1636 aa21.16■□□□□ 0.98
SCAP-205ENST00000420588 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
SCAP-205ENST00000420588 MBD5Q9P267 1494 aa21.16■□□□□ 0.98
SCAP-205ENST00000420588 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.97
SCAP-205ENST00000420588 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
SCAP-205ENST00000420588 KDM5CP41229 1560 aa21.12■□□□□ 0.97
SCAP-205ENST00000420588 ZFYVE16Q7Z3T8 1539 aa21.12■□□□□ 0.97
SCAP-205ENST00000420588 TCOF1Q13428 1488 aaKnown RBP21.12■□□□□ 0.97
SCAP-205ENST00000420588 MLH3Q9UHC1 1453 aa21.12■□□□□ 0.97
SCAP-205ENST00000420588 YEATS2Q9ULM3 1422 aa21.11■□□□□ 0.97
SCAP-205ENST00000420588 ARID4BQ4LE39 1312 aaPredicted RBP21.09■□□□□ 0.97
SCAP-205ENST00000420588 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
SCAP-205ENST00000420588 HECW2Q9P2P5 1572 aa21.09■□□□□ 0.97
SCAP-205ENST00000420588 ATP10AO60312 1499 aa21.07■□□□□ 0.96
SCAP-205ENST00000420588 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
SCAP-205ENST00000420588 ARHGEF40Q8TER5 1519 aa21.05■□□□□ 0.96
SCAP-205ENST00000420588 ITGAEP38570 1179 aa21.05■□□□□ 0.96
SCAP-205ENST00000420588 ABCC5O15440 1437 aa21.04■□□□□ 0.96
SCAP-205ENST00000420588 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
SCAP-205ENST00000420588 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
SCAP-205ENST00000420588 DAPK1P53355 1430 aa21.04■□□□□ 0.96
SCAP-205ENST00000420588 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
SCAP-205ENST00000420588 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
SCAP-205ENST00000420588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.01■□□□□ 0.95
SCAP-205ENST00000420588 RRBP1Q9P2E9 1410 aaKnown RBP21.01■□□□□ 0.95
SCAP-205ENST00000420588 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
SCAP-205ENST00000420588 DIP2CQ9Y2E4 1556 aa21■□□□□ 0.95
SCAP-205ENST00000420588 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
SCAP-205ENST00000420588 ABCA6Q8N139 1617 aa20.98■□□□□ 0.95
SCAP-205ENST00000420588 MLECQ14165 292 aa20.98■□□□□ 0.95
SCAP-205ENST00000420588 RRP7BPQ9NSQ0 103 aa20.98■□□□□ 0.95
SCAP-205ENST00000420588 A2MP01023 1474 aa20.96■□□□□ 0.95
SCAP-205ENST00000420588 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
SCAP-205ENST00000420588 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
SCAP-205ENST00000420588 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
SCAP-205ENST00000420588 DHX29Q7Z478 1369 aaKnown RBP20.95■□□□□ 0.94
SCAP-205ENST00000420588 CROCC2H7BZ55 1655 aa20.93■□□□□ 0.94
SCAP-205ENST00000420588 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
SCAP-205ENST00000420588 KIF15Q9NS87 1388 aa20.91■□□□□ 0.94
SCAP-205ENST00000420588 REREQ9P2R6 1566 aa20.91■□□□□ 0.94
SCAP-205ENST00000420588 KIF3BO15066 747 aa20.9■□□□□ 0.94
SCAP-205ENST00000420588 PTPRKQ15262 1439 aa20.89■□□□□ 0.94
SCAP-205ENST00000420588 NCOA1Q15788 1441 aa20.89■□□□□ 0.94
SCAP-205ENST00000420588 GGT6Q6P531 493 aa20.89■□□□□ 0.93
SCAP-205ENST00000420588 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
SCAP-205ENST00000420588 KDM4FA0A1W2PPD8 638 aa20.88■□□□□ 0.93
SCAP-205ENST00000420588 AGLP35573 1532 aa20.88■□□□□ 0.93
SCAP-205ENST00000420588 PLXNC1O60486 1568 aa20.87■□□□□ 0.93
SCAP-205ENST00000420588 DUOX2Q9NRD8 1548 aa20.86■□□□□ 0.93
SCAP-205ENST00000420588 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
SCAP-205ENST00000420588 ROCK1Q13464 1354 aa20.85■□□□□ 0.93
SCAP-205ENST00000420588 SIGLEC1Q9BZZ2 1709 aa20.85■□□□□ 0.93
SCAP-205ENST00000420588 BCORL1Q5H9F3 1711 aa20.84■□□□□ 0.93
SCAP-205ENST00000420588 ERBINQ96RT1 1412 aa20.79■□□□□ 0.92
SCAP-205ENST00000420588 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
SCAP-205ENST00000420588 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
SCAP-205ENST00000420588 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
SCAP-205ENST00000420588 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
SCAP-205ENST00000420588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCAP-205ENST00000420588 ADAMTSL3P82987 1691 aa20.77■□□□□ 0.92
SCAP-205ENST00000420588 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms