RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 DAPK1P53355 1430 aa19.99■□□□□ 0.79
TMEM50B-201ENST00000420455 TTC37Q6PGP7 1564 aa19.98■□□□□ 0.79
TMEM50B-201ENST00000420455 ITGAEP38570 1179 aa19.98■□□□□ 0.79
TMEM50B-201ENST00000420455 NAIPQ13075 1403 aa19.97■□□□□ 0.79
TMEM50B-201ENST00000420455 ABCC5O15440 1437 aa19.97■□□□□ 0.79
TMEM50B-201ENST00000420455 ROCK1Q13464 1354 aa19.97■□□□□ 0.79
TMEM50B-201ENST00000420455 MYO5CQ9NQX4 1742 aa19.94■□□□□ 0.78
TMEM50B-201ENST00000420455 ARHGEF5Q12774 1597 aa19.94■□□□□ 0.78
TMEM50B-201ENST00000420455 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
TMEM50B-201ENST00000420455 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
TMEM50B-201ENST00000420455 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
TMEM50B-201ENST00000420455 SAMD9LQ8IVG5 1584 aa19.91■□□□□ 0.78
TMEM50B-201ENST00000420455 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
TMEM50B-201ENST00000420455 ARAP3Q8WWN8 1544 aa19.91■□□□□ 0.78
TMEM50B-201ENST00000420455 SHANK2Q9UPX8 1470 aa19.91■□□□□ 0.78
TMEM50B-201ENST00000420455 MAPKBP1O60336 1514 aa19.9■□□□□ 0.78
TMEM50B-201ENST00000420455 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
TMEM50B-201ENST00000420455 MBD5Q9P267 1494 aa19.88■□□□□ 0.77
TMEM50B-201ENST00000420455 ABCA9Q8IUA7 1624 aa19.87■□□□□ 0.77
TMEM50B-201ENST00000420455 PLCH2O75038 1416 aa19.86■□□□□ 0.77
TMEM50B-201ENST00000420455 KDM6BO15054 1643 aa19.84■□□□□ 0.77
TMEM50B-201ENST00000420455 MAST1Q9Y2H9 1570 aa19.83■□□□□ 0.77
TMEM50B-201ENST00000420455 KIAA1107Q9UPP5 1409 aa19.83■□□□□ 0.76
TMEM50B-201ENST00000420455 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
TMEM50B-201ENST00000420455 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
TMEM50B-201ENST00000420455 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
TMEM50B-201ENST00000420455 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
TMEM50B-201ENST00000420455 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
TMEM50B-201ENST00000420455 ASXL2Q76L83 1435 aa19.81■□□□□ 0.76
TMEM50B-201ENST00000420455 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
TMEM50B-201ENST00000420455 ARHGAP5Q13017 1502 aa19.8■□□□□ 0.76
TMEM50B-201ENST00000420455 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
TMEM50B-201ENST00000420455 RSPH4AQ5TD94 716 aa19.77■□□□□ 0.76
TMEM50B-201ENST00000420455 ABCC1P33527 1531 aa19.77■□□□□ 0.75
TMEM50B-201ENST00000420455 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
TMEM50B-201ENST00000420455 C9orf84Q5VXU9 1444 aa19.75■□□□□ 0.75
TMEM50B-201ENST00000420455 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
TMEM50B-201ENST00000420455 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
TMEM50B-201ENST00000420455 ARHGEF12Q9NZN5 1544 aa19.74■□□□□ 0.75
TMEM50B-201ENST00000420455 DENND4BO75064 1496 aaPredicted RBP19.74■□□□□ 0.75
TMEM50B-201ENST00000420455 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
TMEM50B-201ENST00000420455 PLXNC1O60486 1568 aa19.73■□□□□ 0.75
TMEM50B-201ENST00000420455 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
TMEM50B-201ENST00000420455 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
TMEM50B-201ENST00000420455 HNRNPMP52272 730 aaKnown RBP eCLIP19.68■□□□□ 0.74
TMEM50B-201ENST00000420455 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
TMEM50B-201ENST00000420455 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
TMEM50B-201ENST00000420455 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
TMEM50B-201ENST00000420455 CFAP74Q9C0B2 1584 aa19.65■□□□□ 0.74
TMEM50B-201ENST00000420455 GLI2P10070 1586 aa19.64■□□□□ 0.74
TMEM50B-201ENST00000420455 FANCAO15360 1455 aa19.64■□□□□ 0.73
TMEM50B-201ENST00000420455 ANKRD50Q9ULJ7 1429 aa19.64■□□□□ 0.73
TMEM50B-201ENST00000420455 TSPY4P0CV99 314 aa19.63■□□□□ 0.73
TMEM50B-201ENST00000420455 TSPY10P0CW01 314 aa19.63■□□□□ 0.73
TMEM50B-201ENST00000420455 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
TMEM50B-201ENST00000420455 PZPP20742 1482 aa19.62■□□□□ 0.73
TMEM50B-201ENST00000420455 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
TMEM50B-201ENST00000420455 MAP3K4Q9Y6R4 1608 aa19.61■□□□□ 0.73
TMEM50B-201ENST00000420455 KIF15Q9NS87 1388 aa19.6■□□□□ 0.73
TMEM50B-201ENST00000420455 TRAPPC8Q9Y2L5 1435 aa19.6■□□□□ 0.73
TMEM50B-201ENST00000420455 INO80Q9ULG1 1556 aaPredicted RBP19.6■□□□□ 0.73
TMEM50B-201ENST00000420455 ZFYVE16Q7Z3T8 1539 aa19.59■□□□□ 0.73
TMEM50B-201ENST00000420455 UNC13BO14795 1591 aa19.59■□□□□ 0.73
TMEM50B-201ENST00000420455 DUOX2Q9NRD8 1548 aa19.58■□□□□ 0.72
TMEM50B-201ENST00000420455 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
TMEM50B-201ENST00000420455 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
TMEM50B-201ENST00000420455 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
TMEM50B-201ENST00000420455 ADGRL1O94910 1474 aa19.54■□□□□ 0.72
TMEM50B-201ENST00000420455 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
TMEM50B-201ENST00000420455 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
TMEM50B-201ENST00000420455 NEO1Q92859 1461 aa19.53■□□□□ 0.72
TMEM50B-201ENST00000420455 KDM5CP41229 1560 aa19.53■□□□□ 0.72
TMEM50B-201ENST00000420455 DIP2BQ9P265 1576 aa19.52■□□□□ 0.72
TMEM50B-201ENST00000420455 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.71
TMEM50B-201ENST00000420455 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
TMEM50B-201ENST00000420455 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
TMEM50B-201ENST00000420455 TRIM52Q96A61 297 aa19.5■□□□□ 0.71
TMEM50B-201ENST00000420455 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
TMEM50B-201ENST00000420455 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
TMEM50B-201ENST00000420455 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
TMEM50B-201ENST00000420455 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
TMEM50B-201ENST00000420455 KIDINS220Q9ULH0 1771 aa19.48■□□□□ 0.71
TMEM50B-201ENST00000420455 EIF2AK4Q9P2K8 1649 aaKnown RBP19.47■□□□□ 0.71
TMEM50B-201ENST00000420455 POGZQ7Z3K3 1410 aa19.46■□□□□ 0.71
TMEM50B-201ENST00000420455 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
TMEM50B-201ENST00000420455 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
TMEM50B-201ENST00000420455 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
TMEM50B-201ENST00000420455 PPRC1Q5VV67 1664 aaKnown RBP19.45■□□□□ 0.7
TMEM50B-201ENST00000420455 SPAG9O60271 1321 aaKnown RBP19.44■□□□□ 0.7
TMEM50B-201ENST00000420455 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
TMEM50B-201ENST00000420455 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
TMEM50B-201ENST00000420455 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
TMEM50B-201ENST00000420455 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
TMEM50B-201ENST00000420455 NUP155O75694 1391 aa19.42■□□□□ 0.7
TMEM50B-201ENST00000420455 RICTORQ6R327 1708 aa19.42■□□□□ 0.7
TMEM50B-201ENST00000420455 PPP1R15AO75807 674 aaPredicted RBP19.4■□□□□ 0.7
TMEM50B-201ENST00000420455 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
TMEM50B-201ENST00000420455 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
TMEM50B-201ENST00000420455 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
TMEM50B-201ENST00000420455 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms